Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0809100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33837942:33841646:-1 gene:Os03g0809100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein. (Os03t0809100-01)
Sequence

ATGAGGGCAAAGAAGATGTTTTTTGGTTTTTCCGTTTCTCTTATCCTCATCAACCTAGCT
TCCATAATGGAGCGGGCTGATGAGAATCTCCTTCCGGCAGTTTACAAGGAAGTCAGTGCT
GCTTTCAACGCTGGTCCTACTGATCTGGGGTATCTTACGTTTCTAATGAACTTTCTCAAG
TCAATAGCATCTCCCTTGGCAGGTGTCCTTGCACTTCAATATGATCGCCCTGCAGTTCTT
GCTATAGGGACAGTCTTCTGGGCTGTATCAACAGGGGCTGTTGGTGTCAGCCAGTATTTT
CAGCAGGTTGCATTCTGGAGAGCTGTGAATGGTCTTGGACTAGCCATTGTAATACCGGCA
CTTCAATCCTTCATTGCTGATAGCTACAAAGATGGTACACGCGGAGCAGGGTTTGGCTTG
TTAAGCCTCATTGGTTCAATAGGTGGTATAGGTGGAAGTATTTTAGCAACAATCATGGCT
GGTAGGGATTACTGGGGATTGCCAGGATGGAGGTTTGCATTTCTAATGGTTGCATTTCTT
AGCTTGTTAATTGGGCTTCTTGTCTACTTTTACACGGTTGATCCTAGAAAAGTGTCTCCA
AGCCATTTTGGTGATGACGAGGACCACCATGAGAGGTCGCATTTGATCGGTAATGGTATT
TTTCCTCCACAGTCCATCTGGAAGGATTCCTGGATAGCAGCAAGATCTGTCATGAAAGTG
CGAACATTTCAAATCATTGTCTTGCAGGGCATAGTTGGCTCATTGCCATGGACTGCTGTA
GTTTTCTTCACAATGTGGTTTGAGCTCATTGGTTTTGACAATAGCAGTTCAGCAGCGCTA
AACAGCATGTTTGCTATCGGTTGTGCCAGTGGATCATTTCTAGGCGGAGTAATTGCAGAC
CGTCTGTCAAAATACTATCCTGATTCAGCTCGCATCATGTGTGCTCAGTTTAGCGCCTTC
ATGGGTATCCCTTTCTCTTGGATCCTCCTTACAGTCATTCCTCAGTCAGTCGACTACTGG
TCTGCTTTTGCTGTCACTCTCTTCTTGATGGGGATTACCATCAGCTGGTGCGCTACTTGC
GCAAACAACCCCATGTTTGCGGAGGTAGTCCCTCCCAAGCACCGCACGATGATCTATGCC
TTCGACCGCGCGTTCGAGGGTTCATTTGCCTCCCTGGCTGCTCCTGCTGTTGGCATGGTC
ACTGAGAAGATCTATGGCTACAACGCAAAGACCGTCAATCTGGAAAATGGATCGGTAGCA
GGGGCGTATGCACTCTCGAGGGGGCTATTGACAATGATGATTGTTCCTTTTGGCCTGTGC
TTCTTGTTCTACAGCCCACTGTACTTTGTGTTCAAGCGCGATCGAGAAAATGTTAGAAGA
TTGCCTAGTGTCAAGGAGCAGGAGCTAATATGA

Peptide Sequence

PEP ID

Os03t0809100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33837942:33841646:-1 gene:Os03g0809100 transcript:Os03t0809100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein. (Os03t0809100-01)
Sequence

MRAKKMFFGFSVSLILINLASIMERADENLLPAVYKEVSAAFNAGPTDLGYLTFLMNFLK
SIASPLAGVLALQYDRPAVLAIGTVFWAVSTGAVGVSQYFQQVAFWRAVNGLGLAIVIPA
LQSFIADSYKDGTRGAGFGLLSLIGSIGGIGGSILATIMAGRDYWGLPGWRFAFLMVAFL
SLLIGLLVYFYTVDPRKVSPSHFGDDEDHHERSHLIGNGIFPPQSIWKDSWIAARSVMKV
RTFQIIVLQGIVGSLPWTAVVFFTMWFELIGFDNSSSAALNSMFAIGCASGSFLGGVIAD
RLSKYYPDSARIMCAQFSAFMGIPFSWILLTVIPQSVDYWSAFAVTLFLMGITISWCATC
ANNPMFAEVVPPKHRTMIYAFDRAFEGSFASLAAPAVGMVTEKIYGYNAKTVNLENGSVA
GAYALSRGLLTMMIVPFGLCFLFYSPLYFVFKRDRENVRRLPSVKEQELI

Transcript Sequence

Transcript ID

Os03t0809100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33837942:33841646:-1 gene:Os03g0809100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily protein. (Os03t0809100-01)
Sequence

ATCAGTTTCCTCGTCCTTGCCTCGCATAGTCGCAGCTCTTCTCTCTCTCGCTCGCTCGCT
CGATCCGAGCAAGGTAACCGCAGCTGCAAGCGTGCGGTTCTTGCGGATCTCGCGCGGGCT
CGGCTCTGCGAGGAGGAGCTCATCCCCCACTGTCCCAATATGAGGGCAAAGAAGATGTTT
TTTGGTTTTTCCGTTTCTCTTATCCTCATCAACCTAGCTTCCATAATGGAGCGGGCTGAT
GAGAATCTCCTTCCGGCAGTTTACAAGGAAGTCAGTGCTGCTTTCAACGCTGGTCCTACT
GATCTGGGGTATCTTACGTTTCTAATGAACTTTCTCAAGTCAATAGCATCTCCCTTGGCA
GGTGTCCTTGCACTTCAATATGATCGCCCTGCAGTTCTTGCTATAGGGACAGTCTTCTGG
GCTGTATCAACAGGGGCTGTTGGTGTCAGCCAGTATTTTCAGCAGGTTGCATTCTGGAGA
GCTGTGAATGGTCTTGGACTAGCCATTGTAATACCGGCACTTCAATCCTTCATTGCTGAT
AGCTACAAAGATGGTACACGCGGAGCAGGGTTTGGCTTGTTAAGCCTCATTGGTTCAATA
GGTGGTATAGGTGGAAGTATTTTAGCAACAATCATGGCTGGTAGGGATTACTGGGGATTG
CCAGGATGGAGGTTTGCATTTCTAATGGTTGCATTTCTTAGCTTGTTAATTGGGCTTCTT
GTCTACTTTTACACGGTTGATCCTAGAAAAGTGTCTCCAAGCCATTTTGGTGATGACGAG
GACCACCATGAGAGGTCGCATTTGATCGGTAATGGTATTTTTCCTCCACAGTCCATCTGG
AAGGATTCCTGGATAGCAGCAAGATCTGTCATGAAAGTGCGAACATTTCAAATCATTGTC
TTGCAGGGCATAGTTGGCTCATTGCCATGGACTGCTGTAGTTTTCTTCACAATGTGGTTT
GAGCTCATTGGTTTTGACAATAGCAGTTCAGCAGCGCTAAACAGCATGTTTGCTATCGGT
TGTGCCAGTGGATCATTTCTAGGCGGAGTAATTGCAGACCGTCTGTCAAAATACTATCCT
GATTCAGCTCGCATCATGTGTGCTCAGTTTAGCGCCTTCATGGGTATCCCTTTCTCTTGG
ATCCTCCTTACAGTCATTCCTCAGTCAGTCGACTACTGGTCTGCTTTTGCTGTCACTCTC
TTCTTGATGGGGATTACCATCAGCTGGTGCGCTACTTGCGCAAACAACCCCATGTTTGCG
GAGGTAGTCCCTCCCAAGCACCGCACGATGATCTATGCCTTCGACCGCGCGTTCGAGGGT
TCATTTGCCTCCCTGGCTGCTCCTGCTGTTGGCATGGTCACTGAGAAGATCTATGGCTAC
AACGCAAAGACCGTCAATCTGGAAAATGGATCGGTAGCAGGGGCGTATGCACTCTCGAGG
GGGCTATTGACAATGATGATTGTTCCTTTTGGCCTGTGCTTCTTGTTCTACAGCCCACTG
TACTTTGTGTTCAAGCGCGATCGAGAAAATGTTAGAAGATTGCCTAGTGTCAAGGAGCAG
GAGCTAATATGATTATCAAATGCTTGCTCGTAAGGGGTGATAGGGGTTTAGTGACCAACA
GTTACTACAAGTATCTGATTTTCGGCACCAACTGAAAATTTATGTTCAGAGTTGAAATGT
TGCAGTTGAGTAATACAGTTTCCACTTTCTTCAGGCAGATAAGAAAACCACAGAAACACA
CGATGAATTGTTGTATAATTATTATATCAAGAGTCAAGAGGGAAGCAAAACATTGTCTGT
CATTTTCTTCTAACTTTTTTGTAGATAAACGGAAAGCTTTTAATCTTTCTGCTTACTTGG
CTAGGGAATTTTCTTGTAAACCTGAACTTTACAAAGATAATCATCCGTTCTAGACATTGC
TGACATT