Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0808100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:33780015:33786259:-1 gene:Os03g0808100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A2 description:Similar to Cellulose synthase-5. (Os03t0808100-01);Similar to Cellulose synthase BoCesA5. (Os03t0808100-02);Similar to Cellulose synthase BoCesA5. (Os03t0808100-03)
Sequence	ATGGACGGTGCGAAATCGGGGAAGCAATGCCATGTCTGCCAGATCTGCGGCGACGGCGTG GGCACGGCGGCGGACGGCGAGCTCTTCACCGCCTGCGACGTCTGCGGGTTCCCGGTGTGC CGGCCATGCTACGAGTACGAGCGCAAGGACGGCAGCCAGGCGTGCCCGCAGTGCAAGACC AAGTACAAGCGCCACAAGGGGAGCCCGCCGATACTTGGGGATGAAAGCGATGATGTTGAT GCGGATGATGCTAGTGATGTGAACTATCCAACATCCGGCAACCAGGACCATAAGCACAAG ATTGCCGAGAGGATGCTCACCTGGCGCATGAACTCTGGGAGGAATGATGATATTGTCCAT TCTAAGTATGATAGTGGTGAGATTGGTCATCCCAAGTATGACAGTGGTGAAATCCCTCGC ATATATATCCCATCGCTCACTCACAGCCAGATCTCAGGTGAAATTCCTGGAGCGTCCCCT GATCATATGATGTCTCCCGTTGGGAACATTGGCAGACGTGGGCATCCATTTCCCTATGTG AACCATTCACCAAACCCATCAAGGGAGTTTTCTGGTAGCCTTGGCAATGTTGCATGGAAA GAGAGAGTAGATGGCTGGAAAATGAAGGATAAAGGTGCAATTCCCATGGCTAATGGTACT AGCATTGCTCCTTCAGAAGGTCGTGGGGTTGGTGACATTGATGCATCTACTGACTATAAC ATGGAGGACGCCTTACTGAATGATGAAACACGCCAACCTCTATCGAGAAAAGTGCCAATT TCGTCATCCAGAATAAATCCGTACAGGATGGTTATTGTGCTCCGATTGATTGTCCTATGT ATATTCTTGCACTACCGTATCACAAATCCTGTGCGTAATGCATACCCGCTATGGTTGCTC TCTGTCATATGTGAGATTTGGTTTGCTCTATCCTGGATTCTGGATCAGTTCCCCAAGTGG TCCCCAATCAACCGTGAAACTTACCTGGATAGGCTGGCTTTAAGGTATGACCGGGAAGGT GAACCATCTCAATTGGCTCCTGTTGACATTTTTGTCAGTACTGTGGATCCTATGAAAGAA CCTCCTCTTGTCACTGCCAATACTGTGCTCTCCATCCTTGCTGTGGATTACCCTGTTGAT AAGGTATCTTGCTATGTGTCTGATGATGGAGCTGCAATGTTAACATTTGATGCGCTTGCT GAGACTTCAGAATTTGCTAGAAAATGGGTACCGTTCTGTAAAAAGTACAGCATAGAACCC AGAGCTCCAGAGTGGTACTTTGCACAGAAAATTGATTACTTGAAAGACAAAGTTCAGGCT TCTTTTGTTAAAGATCGTCGTGCCATGAAGAGGGAATATGAAGAATTTAAAGTTCGTGTT AATGCTCTCGTCGCCAAGGCACAGAAAGTTCCTGAGGAAGGATGGATTATGCAAGATGGC ACACCTTGGCCTGGTAACAATACCAGAGACCATCCTGGAATGATTCAGGTTTTCCTTGGT CATAGTGGAGGCCTTGATACCGAAGGCAATGAGCTTCCTCGTTTAGTCTATGTGTCTCGT GAGAAACGTCCTGGATTCCAACACCATAAAAAGGCTGGTGCTATGAATGCACTTGTTCGT GTATCAGCTGTCCTTACTAATGGACAATACTTGTTGAATCTTGACTGTGATCACTACATC AACAATAGCAAAGCTCTCCGAGAGGCTATGTGCTTCCTTATGGATCCAAACCTAGGAAGG CGTGTCTGTTATGTCCAATTCCCTCAGAGGTTTGACGGTATCGATAGAAATGATCGATAT GCAAACAGGAACACCGTGTTTTTCGATATTAATTTGAGAGGTCTCGATGGTCTCCAAGGA CCAGTTTATGTGGGAACCGGTTGTGTGTTCAACAGAACAGCTCTTTATGGTTATGAACCC CCCATTAAGCAGAAGAGGCCAGGTTACTTCTCTTCGCTTTGTGGGGGACGAAAGAAGACA AAAAAGTCGAAGGAGAAGAGCACGGAAAAGAAAAAGTCACACAAACATGTGGACAGTTCT GTGCCAGTTTTTAATCTTGAAGATATAGAGGAAGGGATTGAAGGTTCTGGATTTGATGAT GAGAAATCACTACTGATGTCTCAAATGAGCTTAGAGAAAAGATTTGGTCAATCTAGTGTT TTTGTAGCCTCCACTCTGATGGAATATGGTGGTGTTCCTCAATCCGCAACTCCAGAATCT CTTCTGAAAGAGGCCATACATGTTATCAGCTGTGGCTATGAAGACAAAAGTGACTGGGGA ACTGAGATTGGATGGATCTATGGTTCTGTTACAGAAGATATTCTCACTGGATTCAAGATG CATGCACGTGGCTGGCGGTCAATCTACTGCATGCCTAAGCGACCAGCATTCAAGGGGTCT GCCCCAATTAATCTTTCGGATCGTCTGAACCAGGTGCTTCGGTGGGCTCTTGGTTCTGTG GAAATTCTTTTTAGCAGGCATTGTCCCATATGGTATGGGTACGGAGGACGGCTTAAGTTC CTGGAGAGATTTGCTTACATCAACACCACTATTTATCCACTCACATCGATTCCACTCCTC TTGTACTGCATATTGCCAGCTATCTGTCTTCTCACTGGGAAGTTCATCATACCAGAGATT AGCAACTTTGCGAGTATTTGGTTTATCTCTCTCTTTCTGTCAATCTTTGCTACTGGTATC CTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAATGGTGGAGGAATGAGCAGTTTTGG GTTATTGGAGGTATTTCCGCTCATCTATTTGCGGTCTTCCAGGGTCTGCTGAAGGTGCTT GCTGGAATTGATACCAGCTTCACTGTCACCTCAAAGGCCTCTGATGAAGAAGGCGATTTC GCTGAGCTCTACATGTTCAAGTGGACAACCCTTCTGATCCCACCGACCACTATTTTGATC ATCAACCTGGTCGGTGTTGTTGCTGGTATCTCCTACGCTATCAACAGTGGCTACCAGTCA TGGGGTCCGCTCTTTGGGAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCACCTGTACCCC TTCCTTAAGGGTCTCATGGGTCGGCAGAACCGTACACCGACCATTGTTGTTGTTTGGGCC ATCCTCCTTGCATCGATCTTCTCCTTGCTGTGGGTTCGTATCGATCCATTCACCACCCGT GTCACAGGCCCTGATACCCAAAAATGTGGTATCAACTGCTAG

Peptide Sequence

PEP ID	Os03t0808100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:33780015:33786259:-1 gene:Os03g0808100 transcript:Os03t0808100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A2 description:Similar to Cellulose synthase-5. (Os03t0808100-01);Similar to Cellulose synthase BoCesA5. (Os03t0808100-02);Similar to Cellulose synthase BoCesA5. (Os03t0808100-03)
Sequence	MDGAKSGKQCHVCQICGDGVGTAADGELFTACDVCGFPVCRPCYEYERKDGSQACPQCKT KYKRHKGSPPILGDESDDVDADDASDVNYPTSGNQDHKHKIAERMLTWRMNSGRNDDIVH SKYDSGEIGHPKYDSGEIPRIYIPSLTHSQISGEIPGASPDHMMSPVGNIGRRGHPFPYV NHSPNPSREFSGSLGNVAWKERVDGWKMKDKGAIPMANGTSIAPSEGRGVGDIDASTDYN MEDALLNDETRQPLSRKVPISSSRINPYRMVIVLRLIVLCIFLHYRITNPVRNAYPLWLL SVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKE PPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEP RAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVNALVAKAQKVPEEGWIMQDG TPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVR VSAVLTNGQYLLNLDCDHYINNSKALREAMCFLMDPNLGRRVCYVQFPQRFDGIDRNDRY ANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPIKQKRPGYFSSLCGGRKKT KKSKEKSTEKKKSHKHVDSSVPVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSV FVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKM HARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKF LERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGI LEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDF AELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYP FLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC

Transcript Sequence

Transcript ID	Os03t0808100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33780015:33786259:-1 gene:Os03g0808100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE A2 description:Similar to Cellulose synthase-5. (Os03t0808100-01);Similar to Cellulose synthase BoCesA5. (Os03t0808100-02);Similar to Cellulose synthase BoCesA5. (Os03t0808100-03)
Sequence	CTCGCTGGTGCCACGTCCTTTTCTTGTCCCGTTTGATTCTTGCAAGCCTCCTCATCCAGC TTGTGCTGCTAGCTACGAGGTCGGCTTTGGCGGTGGCGGGGGGCGCCTTGAATCCGAGGC GATTTGGTGTCTGACTGATTGATTTGCCTCACTTGGGGTGGGGGGGAGTTGGGGTTTCTT GGTTTCATCGGGGCGGCCGCGGAATGCGGTGAATTGGCGGGAGTCCGTTCGTGGAGACAC TTTCTTGGCCGTGAGTTCTTGGTTCGTGCGCCATGGACGGTGCGAAATCGGGGAAGCAAT GCCATGTCTGCCAGATCTGCGGCGACGGCGTGGGCACGGCGGCGGACGGCGAGCTCTTCA CCGCCTGCGACGTCTGCGGGTTCCCGGTGTGCCGGCCATGCTACGAGTACGAGCGCAAGG ACGGCAGCCAGGCGTGCCCGCAGTGCAAGACCAAGTACAAGCGCCACAAGGGGAGCCCGC CGATACTTGGGGATGAAAGCGATGATGTTGATGCGGATGATGCTAGTGATGTGAACTATC CAACATCCGGCAACCAGGACCATAAGCACAAGATTGCCGAGAGGATGCTCACCTGGCGCA TGAACTCTGGGAGGAATGATGATATTGTCCATTCTAAGTATGATAGTGGTGAGATTGGTC ATCCCAAGTATGACAGTGGTGAAATCCCTCGCATATATATCCCATCGCTCACTCACAGCC AGATCTCAGGTGAAATTCCTGGAGCGTCCCCTGATCATATGATGTCTCCCGTTGGGAACA TTGGCAGACGTGGGCATCCATTTCCCTATGTGAACCATTCACCAAACCCATCAAGGGAGT TTTCTGGTAGCCTTGGCAATGTTGCATGGAAAGAGAGAGTAGATGGCTGGAAAATGAAGG ATAAAGGTGCAATTCCCATGGCTAATGGTACTAGCATTGCTCCTTCAGAAGGTCGTGGGG TTGGTGACATTGATGCATCTACTGACTATAACATGGAGGACGCCTTACTGAATGATGAAA CACGCCAACCTCTATCGAGAAAAGTGCCAATTTCGTCATCCAGAATAAATCCGTACAGGA TGGTTATTGTGCTCCGATTGATTGTCCTATGTATATTCTTGCACTACCGTATCACAAATC CTGTGCGTAATGCATACCCGCTATGGTTGCTCTCTGTCATATGTGAGATTTGGTTTGCTC TATCCTGGATTCTGGATCAGTTCCCCAAGTGGTCCCCAATCAACCGTGAAACTTACCTGG ATAGGCTGGCTTTAAGGTATGACCGGGAAGGTGAACCATCTCAATTGGCTCCTGTTGACA TTTTTGTCAGTACTGTGGATCCTATGAAAGAACCTCCTCTTGTCACTGCCAATACTGTGC TCTCCATCCTTGCTGTGGATTACCCTGTTGATAAGGTATCTTGCTATGTGTCTGATGATG GAGCTGCAATGTTAACATTTGATGCGCTTGCTGAGACTTCAGAATTTGCTAGAAAATGGG TACCGTTCTGTAAAAAGTACAGCATAGAACCCAGAGCTCCAGAGTGGTACTTTGCACAGA AAATTGATTACTTGAAAGACAAAGTTCAGGCTTCTTTTGTTAAAGATCGTCGTGCCATGA AGAGGGAATATGAAGAATTTAAAGTTCGTGTTAATGCTCTCGTCGCCAAGGCACAGAAAG TTCCTGAGGAAGGATGGATTATGCAAGATGGCACACCTTGGCCTGGTAACAATACCAGAG ACCATCCTGGAATGATTCAGGTTTTCCTTGGTCATAGTGGAGGCCTTGATACCGAAGGCA ATGAGCTTCCTCGTTTAGTCTATGTGTCTCGTGAGAAACGTCCTGGATTCCAACACCATA AAAAGGCTGGTGCTATGAATGCACTTGTTCGTGTATCAGCTGTCCTTACTAATGGACAAT ACTTGTTGAATCTTGACTGTGATCACTACATCAACAATAGCAAAGCTCTCCGAGAGGCTA TGTGCTTCCTTATGGATCCAAACCTAGGAAGGCGTGTCTGTTATGTCCAATTCCCTCAGA GGTTTGACGGTATCGATAGAAATGATCGATATGCAAACAGGAACACCGTGTTTTTCGATA TTAATTTGAGAGGTCTCGATGGTCTCCAAGGACCAGTTTATGTGGGAACCGGTTGTGTGT TCAACAGAACAGCTCTTTATGGTTATGAACCCCCCATTAAGCAGAAGAGGCCAGGTTACT TCTCTTCGCTTTGTGGGGGACGAAAGAAGACAAAAAAGTCGAAGGAGAAGAGCACGGAAA AGAAAAAGTCACACAAACATGTGGACAGTTCTGTGCCAGTTTTTAATCTTGAAGATATAG AGGAAGGGATTGAAGGTTCTGGATTTGATGATGAGAAATCACTACTGATGTCTCAAATGA GCTTAGAGAAAAGATTTGGTCAATCTAGTGTTTTTGTAGCCTCCACTCTGATGGAATATG GTGGTGTTCCTCAATCCGCAACTCCAGAATCTCTTCTGAAAGAGGCCATACATGTTATCA GCTGTGGCTATGAAGACAAAAGTGACTGGGGAACTGAGATTGGATGGATCTATGGTTCTG TTACAGAAGATATTCTCACTGGATTCAAGATGCATGCACGTGGCTGGCGGTCAATCTACT GCATGCCTAAGCGACCAGCATTCAAGGGGTCTGCCCCAATTAATCTTTCGGATCGTCTGA ACCAGGTGCTTCGGTGGGCTCTTGGTTCTGTGGAAATTCTTTTTAGCAGGCATTGTCCCA TATGGTATGGGTACGGAGGACGGCTTAAGTTCCTGGAGAGATTTGCTTACATCAACACCA CTATTTATCCACTCACATCGATTCCACTCCTCTTGTACTGCATATTGCCAGCTATCTGTC TTCTCACTGGGAAGTTCATCATACCAGAGATTAGCAACTTTGCGAGTATTTGGTTTATCT CTCTCTTTCTGTCAATCTTTGCTACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCA TCGATGAATGGTGGAGGAATGAGCAGTTTTGGGTTATTGGAGGTATTTCCGCTCATCTAT TTGCGGTCTTCCAGGGTCTGCTGAAGGTGCTTGCTGGAATTGATACCAGCTTCACTGTCA CCTCAAAGGCCTCTGATGAAGAAGGCGATTTCGCTGAGCTCTACATGTTCAAGTGGACAA CCCTTCTGATCCCACCGACCACTATTTTGATCATCAACCTGGTCGGTGTTGTTGCTGGTA TCTCCTACGCTATCAACAGTGGCTACCAGTCATGGGGTCCGCTCTTTGGGAAGCTCTTCT TTGCCTTCTGGGTGATTGTCCACCTGTACCCCTTCCTTAAGGGTCTCATGGGTCGGCAGA ACCGTACACCGACCATTGTTGTTGTTTGGGCCATCCTCCTTGCATCGATCTTCTCCTTGC TGTGGGTTCGTATCGATCCATTCACCACCCGTGTCACAGGCCCTGATACCCAAAAATGTG GTATCAACTGCTAGGAGTGAGCAAGATAGTAGGCAAAGAATCGCCAGTTTGCTATCCATT CTGTTGTGTAAGTTATTAGTGGATGACTCTATATAGTCTACTGTAAGATCTTAGCTGCCG GAATGCTTGTTATGTATTAAGGAGTAGTAAGTGGTACCTTGCTGTTCATCTGTTGATAAT TAAGTTAGTAGAACTACTTTGCTGAAAAATGCCTGACAACATTCTGCTGCACTTAATGGG AATATGAAATCAATGTTGCTCTGTATGAAAGAATTTACATGTATATAACTTGAATCAATT TAACAAATACACTCTGTAGCCTTGTAGGCACACTGCATTGCAGGTTCCTGGTAGAAACCC CAATGAGTGTATGCACAATGTATGCATAAATATGACTGATTCCTTCTGAATTTTTTTATA CACACTTTATACAGTAATGAACTTTATCAGGCCCAGTTCCTCCTAATTTGTGCTGGTGCA TGGTTGTGGAACAACTGTTCCAGATTTCCTCCATTTTGCATTCTGGCAAGTACTTCCTGT GGCACCATTGTCATCCACCATTTCCAGGTTGATGTCCTGTAAGGAAATGTCATAGCATGG GTAGTTCTTGCTGCAGTTCAGAGTGATGGCACTCTTGGAAATTGTTGTCCCTGCGATGTT CTTGAAGACCACATTGCTAATCTCCACTGCTGATCCCTGAGATCCATGTTCATGGCAAAT TTGCAATAATTGTGTGATTTGGATGATTTTTGTTGAGCATTACTCACTGGTGTTAAATAA AGGATTGGTTTTTGAGAG