Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0805100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:33605547:33612423:1 gene:Os03g0805100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Squalene synthase (EC 2.5.1.21). (Os03t0805100-01)
Sequence	ATGGGGGTGCTGTCGAGGCCGGAGGAGGTGTTGCCGCTGGTGAAGCTGCGGGTGGCGGCG GGGCGGATCAAGCGGCAGATCCCGCCGGAGGAGCACTGGGCCTTCGCCTACACCATGCTG CAGAGGGTCTCCCGGAGCTTCGCGCTCGTCATCCAGCAGCTCGGCCCCGACCTCCGCAAT GCCGTGTGCATCTTCTATCTCGTGCTCCGAGCCCTCGACACTGTTGAGGACGACACTAGC ATTCCTGCCGCGGTGAAGGTGCCGATCCTTAAGGAATTCCATCGGCATATCTACAACCGC GACTGGCATTATTCATGTGGAACAAAAGACTACAAATTACTGATGGATAAGTTTCGCCTT GTCTCCACGGCTTTCTTGGAGCTTGGTCAAGGTTATCAAGAGGCAATTGAAGAAATCACT AGGCTAATGGGAGCAGGAATGGCAAAATTTATCTGCAAGGAGGTTGAAACTGTTGATGAC TACAATGAGTACTGTCACTATGTAGCAGGGCTAGTGGGGTATGGGCTTTCCAGGCTCTTT CATGCTGGTGGGACGGAAGATCTGGCTTCAGATTCACTTTCAAATTCAATGGGCTTGTTT CTGCAGAAAATCAATATAATTAGGGATTATTTGGAGGACATAAACGAGATACCAAAGTCA CGTATGTTCTGGCCTCGAGAAATATGGAGTAAATATGTCAATAAACTCGAGGATTTGAAA TACGAGGAAAATTCAGAAAAGGCAGTTCAGTGTTTGAATGATATGGTGACTAACGCTCTG TCTCATGCTGAAGACTGCCTCCAATACATGTCAGCATTGAAGGATCATGCCATTTTCCGT TTTTGTGCAATACCTCAGATAATGGCAATTGGGACATGTGCTATTTGCTACAATAATGTG AATGTCTTTAGAGGAGTTGTTAAGATGAGGCGTGGGCTCACTGCACGAGTAATTGATGAG ACAAACACAATGTCAGATGTCTATACTGCTTTCTATGAGTTCTCTTCGCTGATAGAATCG AAGATTGATAATAATGATCCAAATGCTTCCCTAACGCGGAAACGTGTTGATGCGATAAAG AGAACCTGCAAGTCATCTTGCTCACTAAAGAGAAGGGGATACGATTTGGAGAAGTCAAAG TACAACTCCATGCTGATAATGGTTGTACTTCTGTTGGTGGCTATTGTTTTGGGCATGATA TATGCCAAGTGA

Peptide Sequence

PEP ID	Os03t0805100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:33605547:33612423:1 gene:Os03g0805100 transcript:Os03t0805100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Squalene synthase (EC 2.5.1.21). (Os03t0805100-01)
Sequence	MGVLSRPEEVLPLVKLRVAAGRIKRQIPPEEHWAFAYTMLQRVSRSFALVIQQLGPDLRN AVCIFYLVLRALDTVEDDTSIPAAVKVPILKEFHRHIYNRDWHYSCGTKDYKLLMDKFRL VSTAFLELGQGYQEAIEEITRLMGAGMAKFICKEVETVDDYNEYCHYVAGLVGYGLSRLF HAGGTEDLASDSLSNSMGLFLQKINIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLK YEENSEKAVQCLNDMVTNALSHAEDCLQYMSALKDHAIFRFCAIPQIMAIGTCAICYNNV NVFRGVVKMRRGLTARVIDETNTMSDVYTAFYEFSSLIESKIDNNDPNASLTRKRVDAIK RTCKSSCSLKRRGYDLEKSKYNSMLIMVVLLLVAIVLGMIYAK

Transcript Sequence

Transcript ID	Os03t0805100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33605547:33612423:1 gene:Os03g0805100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Squalene synthase (EC 2.5.1.21). (Os03t0805100-01)
Sequence	GGGGGTTGGGATTTGGATTTGGATCGTGGGGATCAGGGGGAGGAGGAGATGGGGGTGCTG TCGAGGCCGGAGGAGGTGTTGCCGCTGGTGAAGCTGCGGGTGGCGGCGGGGCGGATCAAG CGGCAGATCCCGCCGGAGGAGCACTGGGCCTTCGCCTACACCATGCTGCAGAGGGTCTCC CGGAGCTTCGCGCTCGTCATCCAGCAGCTCGGCCCCGACCTCCGCAATGCCGTGTGCATC TTCTATCTCGTGCTCCGAGCCCTCGACACTGTTGAGGACGACACTAGCATTCCTGCCGCG GTGAAGGTGCCGATCCTTAAGGAATTCCATCGGCATATCTACAACCGCGACTGGCATTAT TCATGTGGAACAAAAGACTACAAATTACTGATGGATAAGTTTCGCCTTGTCTCCACGGCT TTCTTGGAGCTTGGTCAAGGTTATCAAGAGGCAATTGAAGAAATCACTAGGCTAATGGGA GCAGGAATGGCAAAATTTATCTGCAAGGAGGTTGAAACTGTTGATGACTACAATGAGTAC TGTCACTATGTAGCAGGGCTAGTGGGGTATGGGCTTTCCAGGCTCTTTCATGCTGGTGGG ACGGAAGATCTGGCTTCAGATTCACTTTCAAATTCAATGGGCTTGTTTCTGCAGAAAATC AATATAATTAGGGATTATTTGGAGGACATAAACGAGATACCAAAGTCACGTATGTTCTGG CCTCGAGAAATATGGAGTAAATATGTCAATAAACTCGAGGATTTGAAATACGAGGAAAAT TCAGAAAAGGCAGTTCAGTGTTTGAATGATATGGTGACTAACGCTCTGTCTCATGCTGAA GACTGCCTCCAATACATGTCAGCATTGAAGGATCATGCCATTTTCCGTTTTTGTGCAATA CCTCAGATAATGGCAATTGGGACATGTGCTATTTGCTACAATAATGTGAATGTCTTTAGA GGAGTTGTTAAGATGAGGCGTGGGCTCACTGCACGAGTAATTGATGAGACAAACACAATG TCAGATGTCTATACTGCTTTCTATGAGTTCTCTTCGCTGATAGAATCGAAGATTGATAAT AATGATCCAAATGCTTCCCTAACGCGGAAACGTGTTGATGCGATAAAGAGAACCTGCAAG TCATCTTGCTCACTAAAGAGAAGGGGATACGATTTGGAGAAGTCAAAGTACAACTCCATG CTGATAATGGTTGTACTTCTGTTGGTGGCTATTGTTTTGGGCATGATATATGCCAAGTGA TTCGTCCTAGGTGGTCCATTGCCCTCAACTAGACAATCTATGCGCATCAGATTTCTTATC AGCGCCAACTCCAAAGCACATGCAGCAATTATAAGTACTGACTGACTGCAAGAATAGACT GTACTTCTATGAAGTTGGATCTCTTCACCTATCTGTTCACCCTAAACCTTTTCATGGTTT ATAAGAATGCGGGTTGTTTCTTGCAAAATTTTGGGTAGAATGGTGCAAAAAAGAATTTGT TCGATAATGAAGATAGCTGTGGTTTTGTTAGCTTGTGTTATATTGATGTAATTTAAGATC ATGCGAGTGTTTATTTTCCCGGCGACATTCTTTTGTTTATTCATTATATGCAGTATCCAT TTATCTTGGCTCTC