Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0802900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33500903:33504993:-1 gene:Os03g0802900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 089 description:Similar to MYC1. (Os03t0802900-01)
Sequence

ATGGACCCCGCCCCCACGCTCGCCGCCGAGCTCTGGCGAACGCCGTACCTCGGTGGCGGT
GGTGGTGGAGGAGGAGGAGGGCGTGGGTTGGAGGCGGCGGCGTCCGGGGTCACGGAGCAG
AGCAATGGGAGCCGCGGGGGTGGCGGAGGAGGAGGCGCAGGGCGGAGGAGGCAGCGGGAG
GCCCCCGCGCTCGAGGACGACTCGTCCAGGATCGTCTCCACTTCCGGAGGAGGAGGCGGC
GGTCAGGATTTGACTGATTCAGAAGCAAAGCGTTTCAAGGCAAGTAAATCAAGTGGAGAT
AATAGCAGTTTAAGAACAGAGGCTGAAACTGATTCAAGAAATGCTAGCAAGTCTGGTGAT
CAAAATCCGCCACCACCAGAACCACCAAAGCAAGACTACATCCATGTGAGGGCAAGAAGG
GGTCAAGCTACTGACAGCCATAGCCTTGCCGAAAGGGCACGTCGTGAGAAAATAAGTGAG
CGGATGAAAATTCTCCAGGATCTTGTCCCTGGATGCAACAAGGTTATTGGGAAAGCATCA
GTACTTGATGAGATAATTAATTATATCCAGGCTTTGCAACGGCAAGTTGAGTTTTTGTCC
ATGAAGCTTGAGGCTGTTAATGCTCATGTGAATAATGGAATCGAAGCATTTCCACCCAAA
GATTTTGGTGCTCAGGTATACAACACGGCTCCTGGATTGACGTTTGATCCACAAACACCA
AGAGAATACGCCCAGGGATCAACACCATCGGAATGGCTCCACATGCAGATTGGTGGCACC
TATGAAAGAGTGACATGA

Peptide Sequence

PEP ID

Os03t0802900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33500903:33504993:-1 gene:Os03g0802900 transcript:Os03t0802900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 089 description:Similar to MYC1. (Os03t0802900-01)
Sequence

MDPAPTLAAELWRTPYLGGGGGGGGGGRGLEAAASGVTEQSNGSRGGGGGGGAGRRRQRE
APALEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGD
QNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS
VLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTP
REYAQGSTPSEWLHMQIGGTYERVT

Transcript Sequence

Transcript ID

Os03t0802900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33500903:33504993:-1 gene:Os03g0802900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 089 description:Similar to MYC1. (Os03t0802900-01)
Sequence

CTACTAGTGTACAGTGCCACTGCGAGCTCTCCTCTCCGCCCCCGATCTGGTCGCCTCGCT
CGCCTCAAACCCTAGAGCTCCATCCACCGGCGAGCCCTCTTGGGCGGAGGTGCTTCATTG
CTGCTGCTGCTGCCATGGACCCCGCCCCCACGCTCGCCGCCGAGCTCTGGCGAACGCCGT
ACCTCGGTGGCGGTGGTGGTGGAGGAGGAGGAGGGCGTGGGTTGGAGGCGGCGGCGTCCG
GGGTCACGGAGCAGAGCAATGGGAGCCGCGGGGGTGGCGGAGGAGGAGGCGCAGGGCGGA
GGAGGCAGCGGGAGGCCCCCGCGCTCGAGGACGACTCGTCCAGGATCGTCTCCACTTCCG
GAGGAGGAGGCGGCGGTCAGGATTTGACTGATTCAGAAGCAAAGCGTTTCAAGGCAAGTA
AATCAAGTGGAGATAATAGCAGTTTAAGAACAGAGGCTGAAACTGATTCAAGAAATGCTA
GCAAGTCTGGTGATCAAAATCCGCCACCACCAGAACCACCAAAGCAAGACTACATCCATG
TGAGGGCAAGAAGGGGTCAAGCTACTGACAGCCATAGCCTTGCCGAAAGGGCACGTCGTG
AGAAAATAAGTGAGCGGATGAAAATTCTCCAGGATCTTGTCCCTGGATGCAACAAGGTTA
TTGGGAAAGCATCAGTACTTGATGAGATAATTAATTATATCCAGGCTTTGCAACGGCAAG
TTGAGTTTTTGTCCATGAAGCTTGAGGCTGTTAATGCTCATGTGAATAATGGAATCGAAG
CATTTCCACCCAAAGATTTTGGTGCTCAGGTATACAACACGGCTCCTGGATTGACGTTTG
ATCCACAAACACCAAGAGAATACGCCCAGGGATCAACACCATCGGAATGGCTCCACATGC
AGATTGGTGGCACCTATGAAAGAGTGACATGAACAGAACAAAGTCAGGATGGTGGCCCAA
AATAAAGCATACCATGAGTTCAGTCAGAAACCACGGCTTTAGATTATTTTTCGAAACTCT
CGTGCTCCAAATTCGATTTCATTCATAGCATGGAGCTCATGTATTTAGAGACTGCGAGCA
CAGTATTTTTACATCTGTACCGGGATACAATTCTCATCAGATTCATGTATTCCACGGAAT
TTCGGCAGGTCACGCTCATTCGTAGCATGAAAGAAAAGTAATAACCATCAATAATTCTCT
TGCT