Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0802700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:33489601:33493527:-1 gene:Os03g0802700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 27 description:RH27 helicase (Fragment). (Os03t0802700-01)
Sequence	ATGGCTCCAGCACCAGCAACCACGAGCTCCAGCAAGCGCTCGAAGAAGCGGAAGCAGCCC GTCGCTCCCCCGCCGGAGTCGGATTCCGAGTCGGAGGAGTTGTCCTACGACACCGCCGCG GCTGACGAGGAGGAGGGGGAAGAGGAGGCGCCGAACCAGATGGAGGAGCTGGAAGAGGAG CAGGAGGAAGAGAAAAAGGAGAAGAAGCAGAAGAAGGAGATGAGCAAGGAGAAGAAGAGG AAGAAGGAGAAGGGGAATGAGGGGGGATCGGGGATTCTGACCAACATGCTCTTCTCCGAG CTCGGCGTCTCCGAGCCTACTGCCAGAGCCATCAGGGAGATGAACTACACCTACCTCACC CAGATTCAAGCTAGGTCCATACCACACCTGTTGAATGGAAAGGATGTGATGGGCGCGGCC AAGACTGGTTCAGGGAAGACTCTTGCCTTCCTCATACCAGCAATCGAGATGCTCCACCAC GCACATTTCATGCCGAGGAATGGGACTGGAGTTGTTGTGGTTTGCCCAACAAGAGAGCTT GCCATCCAGACACACAATGTTGCCAAGGAATTGATGAAGTATCACTCACAAACTCTTGGA TATATTATTGGCGGTAATGGCCGGAGAGGTGAAGCAGATCAGCTTGCAAAGGGAGTCAAT TTATTAGTTGCTACACCAGGCAGGCTTTTGGACCATCTGCAGAATACCAAGGGATTCATA TATAGACGGCTAAAGTGCCTTATAATCGATGAAGCTGATCGTCTATTGGAGCAGAACTTT GAAGAAGATATGAAACAGATATTTAAACGCCTTCCTCTGAATAGACAGACAGTTCTTTTT TCTGCTACACAGACAGAGCAGGTTAAAGAATTTGCCAAGTTGTCATTTGAGAAAAACGAA GAAAGTACCTCAAAACCTGTTTATGTTGGTGTTGATGATGCTGAAACTAATGCTACTGTT GAGGGCTTACAGCAGGGATATTGTGTCATTGATAGCGCAAGAAGGTTTTTGGTTCTTTAT GCTTTCCTAAAAAAGAAACAGAATAAAAAGGTCATGGTGTTCTTCTCATCATGTAATTCA GTCAAGTTCCATGCAGAACTTCTGAATTTTCTCCAGATAGAATGTTCTGATATCCATGGA AAACAAAAGCAGCAGAAGCGTACCACAACATTCTTTAACTTCTGCAAAGCAGAAAAGGGT ATCTTACTATGCACTAATGTGGCAGCACGTGGACTTGATATTCCTGATGTGGATTTCATT GTGCAATATGATCCTCCAGATGAACCAAAGGATTATATTCACAGAGTTGGACGTACTGCA CGTGGTGAAAAAGGCAAAGGAGAAGCACTGTTGTTTTTACTGCCACAAGAACTGAAGTTT CTTATCTACCTGAAGGCTGCTAAGATTTCGCTGACAGAATTAGTGTTCAATGAAAACAAA GTGCCAAATTTGCAATCGCACCTTGAGAATATCGTTGGCGAGAATTATTTCCTGAATCAG TCAGCTAAAGAGGCATACAGATCCTACATCTTGGCATACGACTCACACTCCATGAAAGAC ATTTTTGATGTTCATAATCTCAATCTGAAGGATGTGGCAGCGTCTTTCTGTTTTAAGAAC CCACCAAAGGTAAACATCGATTTGGAGAGCTCTGCATCCAAACATCGGAGGAAGATGAGG AAAGTGGACGGTGGAAGGAGGCATGGCATCAGCGCTGCAAATCCCTACGGAAGAAAAGGC GGTGATGACAAAAGGCAGTTTGCAAGATTCTAG

Peptide Sequence

PEP ID	Os03t0802700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:33489601:33493527:-1 gene:Os03g0802700 transcript:Os03t0802700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 27 description:RH27 helicase (Fragment). (Os03t0802700-01)
Sequence	MAPAPATTSSSKRSKKRKQPVAPPPESDSESEELSYDTAAADEEEGEEEAPNQMEELEEE QEEEKKEKKQKKEMSKEKKRKKEKGNEGGSGILTNMLFSELGVSEPTARAIREMNYTYLT QIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPRNGTGVVVVCPTREL AIQTHNVAKELMKYHSQTLGYIIGGNGRRGEADQLAKGVNLLVATPGRLLDHLQNTKGFI YRRLKCLIIDEADRLLEQNFEEDMKQIFKRLPLNRQTVLFSATQTEQVKEFAKLSFEKNE ESTSKPVYVGVDDAETNATVEGLQQGYCVIDSARRFLVLYAFLKKKQNKKVMVFFSSCNS VKFHAELLNFLQIECSDIHGKQKQQKRTTTFFNFCKAEKGILLCTNVAARGLDIPDVDFI VQYDPPDEPKDYIHRVGRTARGEKGKGEALLFLLPQELKFLIYLKAAKISLTELVFNENK VPNLQSHLENIVGENYFLNQSAKEAYRSYILAYDSHSMKDIFDVHNLNLKDVAASFCFKN PPKVNIDLESSASKHRRKMRKVDGGRRHGISAANPYGRKGGDDKRQFARF

Transcript Sequence

Transcript ID	Os03t0802700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33489601:33493527:-1 gene:Os03g0802700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 27 description:RH27 helicase (Fragment). (Os03t0802700-01)
Sequence	GGCGTCGCGGAGGGATCCTAAACCCTAACCCCCACCCCCCCCCCCCCCCCCCTCACTTCT TCCCGCCGCCGCCGCCGCCGCCGCAGCCATGGCTCCAGCACCAGCAACCACGAGCTCCAG CAAGCGCTCGAAGAAGCGGAAGCAGCCCGTCGCTCCCCCGCCGGAGTCGGATTCCGAGTC GGAGGAGTTGTCCTACGACACCGCCGCGGCTGACGAGGAGGAGGGGGAAGAGGAGGCGCC GAACCAGATGGAGGAGCTGGAAGAGGAGCAGGAGGAAGAGAAAAAGGAGAAGAAGCAGAA GAAGGAGATGAGCAAGGAGAAGAAGAGGAAGAAGGAGAAGGGGAATGAGGGGGGATCGGG GATTCTGACCAACATGCTCTTCTCCGAGCTCGGCGTCTCCGAGCCTACTGCCAGAGCCAT CAGGGAGATGAACTACACCTACCTCACCCAGATTCAAGCTAGGTCCATACCACACCTGTT GAATGGAAAGGATGTGATGGGCGCGGCCAAGACTGGTTCAGGGAAGACTCTTGCCTTCCT CATACCAGCAATCGAGATGCTCCACCACGCACATTTCATGCCGAGGAATGGGACTGGAGT TGTTGTGGTTTGCCCAACAAGAGAGCTTGCCATCCAGACACACAATGTTGCCAAGGAATT GATGAAGTATCACTCACAAACTCTTGGATATATTATTGGCGGTAATGGCCGGAGAGGTGA AGCAGATCAGCTTGCAAAGGGAGTCAATTTATTAGTTGCTACACCAGGCAGGCTTTTGGA CCATCTGCAGAATACCAAGGGATTCATATATAGACGGCTAAAGTGCCTTATAATCGATGA AGCTGATCGTCTATTGGAGCAGAACTTTGAAGAAGATATGAAACAGATATTTAAACGCCT TCCTCTGAATAGACAGACAGTTCTTTTTTCTGCTACACAGACAGAGCAGGTTAAAGAATT TGCCAAGTTGTCATTTGAGAAAAACGAAGAAAGTACCTCAAAACCTGTTTATGTTGGTGT TGATGATGCTGAAACTAATGCTACTGTTGAGGGCTTACAGCAGGGATATTGTGTCATTGA TAGCGCAAGAAGGTTTTTGGTTCTTTATGCTTTCCTAAAAAAGAAACAGAATAAAAAGGT CATGGTGTTCTTCTCATCATGTAATTCAGTCAAGTTCCATGCAGAACTTCTGAATTTTCT CCAGATAGAATGTTCTGATATCCATGGAAAACAAAAGCAGCAGAAGCGTACCACAACATT CTTTAACTTCTGCAAAGCAGAAAAGGGTATCTTACTATGCACTAATGTGGCAGCACGTGG ACTTGATATTCCTGATGTGGATTTCATTGTGCAATATGATCCTCCAGATGAACCAAAGGA TTATATTCACAGAGTTGGACGTACTGCACGTGGTGAAAAAGGCAAAGGAGAAGCACTGTT GTTTTTACTGCCACAAGAACTGAAGTTTCTTATCTACCTGAAGGCTGCTAAGATTTCGCT GACAGAATTAGTGTTCAATGAAAACAAAGTGCCAAATTTGCAATCGCACCTTGAGAATAT CGTTGGCGAGAATTATTTCCTGAATCAGTCAGCTAAAGAGGCATACAGATCCTACATCTT GGCATACGACTCACACTCCATGAAAGACATTTTTGATGTTCATAATCTCAATCTGAAGGA TGTGGCAGCGTCTTTCTGTTTTAAGAACCCACCAAAGGTAAACATCGATTTGGAGAGCTC TGCATCCAAACATCGGAGGAAGATGAGGAAAGTGGACGGTGGAAGGAGGCATGGCATCAG CGCTGCAAATCCCTACGGAAGAAAAGGCGGTGATGACAAAAGGCAGTTTGCAAGATTCTA GAGATGTTCAATACATGGAGTCTCAAAAGACCCTTGGCCCTATGAAATTTTGATAGATAA CTTATATTATCGCATCATGCTATAACACAATTATTCTGTCCAATGTATCCACTTAGTCTA GCACTCGAGATTGTTGAGAAATGAGAATGAAATCGTGTGCCAAATTCATTGCTGGTATCC