Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0801600-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:33424982:33433055:1 gene:Os03g0801600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to vacuolar protein sorting 35. (Os03t0801600-01);Similar to vacuolar protein sorting 35. (Os03t0801600-02)
Sequence	CCCGATCCAAACCCGAGAGGGGACAAGCCCACGCGCGAGAGGCGAGATCCAACCCCAACC CCAACCCGAGCCACCAGAGGCCGACCAGATCCACCCCCGCAGCCAGCGAAGACGGCGGCC ACGGCGGCGGTCAGGATGCTGCCGGATGGCGGCGCCGACGACGAGGAGCGGTGGCTCGCC GAGGGCATCGCCGGCGTCCAGCAGAACGCCTTCTACATGCACCGCGCCCTCGATTCGAAC AACCTCAAGGATGCGCTCAAGTACTCGGCGCAGATGCTCTCCGAGCTGCGGACCTCGCGG CTCTCGCCGCACAAGTATTATGATCTATATATGAGGGCGTTTGATGAGATGCGGAAGCTG GAGATGTTCTTCAGGGAGGAGACCCGTCGTGGCAGCTGCTCCGTTGTTGATTTGTATGAG CTTGTGCAGCATGCTGGCAACGTACTGCCCAGACTCTATCTCCTCTGCACAGTAGGATCT GTGTACATTAAATCAAAAGAGGCTCCTGCGAAAGACGTTCTTAAAGACCTTGTTGAAATG TGTCGAGGCATCCAACATCCTCTTCGTGGGCTTTTCCTAAGAAGCTACCTATCTCAGATA AGCCGAGACAAACTGCCAGATATTGGTTCCGAGTATGAAGGGGATGCTGACAGCATTAAC GTCGCAGTTGAGTTTGTTCTTCAGAATTTCATAGAAATGAACAAACTCTGGGTCCGAATG CAACATCAGGGCCCTGTTCGAGAGAAGGAGAAGCGGGGAAAAGAAAGAAATGAACTGCGT GATTTGGTAGGCAAAAACCTTCACGTTCTAAGCCAGATTGAGGGTGTTGACCTTGACATG TACAAAGAAACTGTCCTTCCAAGGATATTAGAACAGGTGGTTAATTGTAAGGATGAACTT GCACAATTCTACCTGATGGACTGCATAATACAAGTCTTTCCAGACGAATACCATTTACAG ACATTGGAAACATTGTTGAGCGCATTTCCGCAACTACAGCCAAATGTTGATATCAAAACC GTGCTGTCTCAACTCATGGACAGGTTATCAAGCTATGCTGCCGCAAGTCCTGAAGTATTG CCAGAATTCTTGCAAGTTGAAGCTTTTGCAAAGTTCAGCAATGCTATTGGAAAGGTGATA GAGGCCCAAGTTGACATGCCAGTTGTTGGTGCAGTAACTTTATATGTATCACTTTTGACA TTTACTCTCCGTGTGCATCCGGATCGGCTTGATTATGTTGATCAAGTGTTGGGTGCATGC GTAAAGAAACTTTCAGGGAATGCAAAACTTGAAGATAGCAGGGCAACAAAGCAAATTGTT GCACTTCTCAGTGCCCCCCTGGAGAAATATAGCAATATTGTTACTGCATTAGAGCTCTCA AACTATCCTCGGGTTATGGATTACCTTGATAATTCTACAACAAAAGTTATGGCTCTTGTA ATAATTCAAAGCATAATGAAGAACACGACTTGCATATCTACTTCTGACAAGATTGAAGCT CTTTTTGATTTAATTAAAGGTCTTATAAAAGATATGGATGGGGCTCAAAATGATGAGCTT GATGATGAGGATTTTAAGGAGGAACAGAATTCTGTGGCGCGTCTTATTCACATGTTGCAC AATGATGACCATGAAGAGATGTTGAAGATATTATGCACCGTTCAGAAGCATATACTTCAG GGAGGTCCCAAGCGGCTACCTTTCACTGTGCCATCCTTAGTATTCTCTGCTCTCAAGTTG GTCCGAAGATTACAAGGTCAAGATGGTGATGTAATAGGGGAGGAAGTTCCTGCAACGCCT AAGAAAATATTTCAGATCTTGCATCAGACCATTGAAGCTCTCTCATGTGTTCCTTCTCCT GAACTGGCTCTCAGATTATATCTGCAGTGTGCAGAGGCGGCCAATGATTGTGATCTGGAA CCGGTTGCTTATGAGTTCTTTACTCAAGCATTCATCTTATATGAAGAAGAAATTGCGGAT TCAAAGGCTCAAATCACTGCAATTCATCTTATAATTGGAACCCTTCAACGGATGAATATA TTCGGGGTTGAAAATAGAGATACCCTGACTCACAAGACAACAGGGTACTCAGCAAAACTT CTAAAGAAACCTGACCAATGCCGAGCGGTTTATGCATGTTCACACCTTTTCTGGACTGAC GACCAAGACGGAATAATGGATGGTGAAAGGGTCCTCCTTTGTTTAAAGCGTGCCTTAAGA ATTGCAAATGCCGCTCAACAGATGGCTAATGTAACAAGGGGAAGTAGCGGATCTGTCGCG CTATTTATCGAAATTTTGAACAAGTATTTGTACTTCTTCGAGAAAGGAATTCCAGAGATC ACGAACACTGTAATCCAGGATTTGATTGAATTGATTAGGACAGAGAAGCAAAGTGAGAAC ACTGTAGCTGATCCATCGACAGAGGCCTTCTTTGCAAGCACTTTACGTTACATTGAATTC CAGAAGCAGAAAGGTGGGAGCATAGGTGAAAAATATGAGCAAATAAAAACTACCTGA

Peptide Sequence

PEP ID	Os03t0801600-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:33424982:33433055:1 gene:Os03g0801600 transcript:Os03t0801600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to vacuolar protein sorting 35. (Os03t0801600-01);Similar to vacuolar protein sorting 35. (Os03t0801600-02)
Sequence	PDPNPRGDKPTRERRDPTPTPTRATRGRPDPPPQPAKTAATAAVRMLPDGGADDEERWLA EGIAGVQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKYYDLYMRAFDEMRKL EMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEM CRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDADSINVAVEFVLQNFIEMNKLWVRM QHQGPVREKEKRGKERNELRDLVGKNLHVLSQIEGVDLDMYKETVLPRILEQVVNCKDEL AQFYLMDCIIQVFPDEYHLQTLETLLSAFPQLQPNVDIKTVLSQLMDRLSSYAAASPEVL PEFLQVEAFAKFSNAIGKVIEAQVDMPVVGAVTLYVSLLTFTLRVHPDRLDYVDQVLGAC VKKLSGNAKLEDSRATKQIVALLSAPLEKYSNIVTALELSNYPRVMDYLDNSTTKVMALV IIQSIMKNTTCISTSDKIEALFDLIKGLIKDMDGAQNDELDDEDFKEEQNSVARLIHMLH NDDHEEMLKILCTVQKHILQGGPKRLPFTVPSLVFSALKLVRRLQGQDGDVIGEEVPATP KKIFQILHQTIEALSCVPSPELALRLYLQCAEAANDCDLEPVAYEFFTQAFILYEEEIAD SKAQITAIHLIIGTLQRMNIFGVENRDTLTHKTTGYSAKLLKKPDQCRAVYACSHLFWTD DQDGIMDGERVLLCLKRALRIANAAQQMANVTRGSSGSVALFIEILNKYLYFFEKGIPEI TNTVIQDLIELIRTEKQSENTVADPSTEAFFASTLRYIEFQKQKGGSIGEKYEQIKTT

Transcript Sequence

Transcript ID	Os03t0801600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33424982:33433055:1 gene:Os03g0801600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to vacuolar protein sorting 35. (Os03t0801600-01);Similar to vacuolar protein sorting 35. (Os03t0801600-02)
Sequence	GCCCCGATCCAAACCCGAGAGGGGACAAGCCCACGCGCGAGAGGCGAGATCCAACCCCAA CCCCAACCCGAGCCACCAGAGGCCGACCAGATCCACCCCCGCAGCCAGCGAAGACGGCGG CCACGGCGGCGGTCAGGATGCTGCCGGATGGCGGCGCCGACGACGAGGAGCGGTGGCTCG CCGAGGGCATCGCCGGCGTCCAGCAGAACGCCTTCTACATGCACCGCGCCCTCGATTCGA ACAACCTCAAGGATGCGCTCAAGTACTCGGCGCAGATGCTCTCCGAGCTGCGGACCTCGC GGCTCTCGCCGCACAAGTATTATGATCTATATATGAGGGCGTTTGATGAGATGCGGAAGC TGGAGATGTTCTTCAGGGAGGAGACCCGTCGTGGCAGCTGCTCCGTTGTTGATTTGTATG AGCTTGTGCAGCATGCTGGCAACGTACTGCCCAGACTCTATCTCCTCTGCACAGTAGGAT CTGTGTACATTAAATCAAAAGAGGCTCCTGCGAAAGACGTTCTTAAAGACCTTGTTGAAA TGTGTCGAGGCATCCAACATCCTCTTCGTGGGCTTTTCCTAAGAAGCTACCTATCTCAGA TAAGCCGAGACAAACTGCCAGATATTGGTTCCGAGTATGAAGGGGATGCTGACAGCATTA ACGTCGCAGTTGAGTTTGTTCTTCAGAATTTCATAGAAATGAACAAACTCTGGGTCCGAA TGCAACATCAGGGCCCTGTTCGAGAGAAGGAGAAGCGGGGAAAAGAAAGAAATGAACTGC GTGATTTGGTAGGCAAAAACCTTCACGTTCTAAGCCAGATTGAGGGTGTTGACCTTGACA TGTACAAAGAAACTGTCCTTCCAAGGATATTAGAACAGGTGGTTAATTGTAAGGATGAAC TTGCACAATTCTACCTGATGGACTGCATAATACAAGTCTTTCCAGACGAATACCATTTAC AGACATTGGAAACATTGTTGAGCGCATTTCCGCAACTACAGCCAAATGTTGATATCAAAA CCGTGCTGTCTCAACTCATGGACAGGTTATCAAGCTATGCTGCCGCAAGTCCTGAAGTAT TGCCAGAATTCTTGCAAGTTGAAGCTTTTGCAAAGTTCAGCAATGCTATTGGAAAGGTGA TAGAGGCCCAAGTTGACATGCCAGTTGTTGGTGCAGTAACTTTATATGTATCACTTTTGA CATTTACTCTCCGTGTGCATCCGGATCGGCTTGATTATGTTGATCAAGTGTTGGGTGCAT GCGTAAAGAAACTTTCAGGGAATGCAAAACTTGAAGATAGCAGGGCAACAAAGCAAATTG TTGCACTTCTCAGTGCCCCCCTGGAGAAATATAGCAATATTGTTACTGCATTAGAGCTCT CAAACTATCCTCGGGTTATGGATTACCTTGATAATTCTACAACAAAAGTTATGGCTCTTG TAATAATTCAAAGCATAATGAAGAACACGACTTGCATATCTACTTCTGACAAGATTGAAG CTCTTTTTGATTTAATTAAAGGTCTTATAAAAGATATGGATGGGGCTCAAAATGATGAGC TTGATGATGAGGATTTTAAGGAGGAACAGAATTCTGTGGCGCGTCTTATTCACATGTTGC ACAATGATGACCATGAAGAGATGTTGAAGATATTATGCACCGTTCAGAAGCATATACTTC AGGGAGGTCCCAAGCGGCTACCTTTCACTGTGCCATCCTTAGTATTCTCTGCTCTCAAGT TGGTCCGAAGATTACAAGGTCAAGATGGTGATGTAATAGGGGAGGAAGTTCCTGCAACGC CTAAGAAAATATTTCAGATCTTGCATCAGACCATTGAAGCTCTCTCATGTGTTCCTTCTC CTGAACTGGCTCTCAGATTATATCTGCAGTGTGCAGAGGCGGCCAATGATTGTGATCTGG AACCGGTTGCTTATGAGTTCTTTACTCAAGCATTCATCTTATATGAAGAAGAAATTGCGG ATTCAAAGGCTCAAATCACTGCAATTCATCTTATAATTGGAACCCTTCAACGGATGAATA TATTCGGGGTTGAAAATAGAGATACCCTGACTCACAAGACAACAGGGTACTCAGCAAAAC TTCTAAAGAAACCTGACCAATGCCGAGCGGTTTATGCATGTTCACACCTTTTCTGGACTG ACGACCAAGACGGAATAATGGATGGTGAAAGGGTCCTCCTTTGTTTAAAGCGTGCCTTAA GAATTGCAAATGCCGCTCAACAGATGGCTAATGTAACAAGGGGAAGTAGCGGATCTGTCG CGCTATTTATCGAAATTTTGAACAAGTATTTGTACTTCTTCGAGAAAGGAATTCCAGAGA TCACGAACACTGTAATCCAGGATTTGATTGAATTGATTAGGACAGAGAAGCAAAGTGAGA ACACTGTAGCTGATCCATCGACAGAGGCCTTCTTTGCAAGCACTTTACGTTACATTGAAT TCCAGAAGCAGAAAGGTGGGAGCATAGGTGAAAAATATGAGCAAATAAAAACTACCTGAT TGTGCACTAAGTCAAAACAAGAACAGCGTCACGACGTGTTGTTTTTGTCTCGAGTCATAT TTGCGGAAGTTCAGTGAAATACAAGCCATTGGTCTCAGCTGCCTCTGGCCTAAAGGATCT TTGCATCTGTTGTTATTTGTGCATCTTACGCTCAAAGCGGGGCCTCCCCTCCATTTTGTG ACATGTTTGGGTTAGTCAGGTGGCAATAAGCTTTACCCTTGGGAAGCTCAGATCTGTACA GCGCAACTTGTGTACCAGAGTATCATTGTTGTATATCCTTTTTCTTTCTTTTCTTTTTTT GTCAAAGAACAATTTTAGGGTTCTAACTTTTTTAACTTTGGAGGTACATATTTCTATTTA TCTGGCTGGACCTTTTGCTTAATTCATAGCAATGAAGGCGTTGAATTTG