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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0800700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33391465:33393588:-1 gene:Os03g0800700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 4 description:Similar to Thioredoxin H-type 5 (TRX-H-5). (Os03t0800700-01)
Sequence

ATGGGCTCCTTCTTCTCGACGATGTTCACGCCGCCGCCCGCCGCCGACGACGGCGGCGAC
TCGCGCGTGGTGGCCGTCCACTCCACGGCCACCTGGGACGAGCAGTGGGGCGCCCACAAG
AGCAACCCCAACAAGCTGATCGTGATCGACTTCTCCGCCACCTGGTGCGGGCCCTGCCGC
TTCATCGAGCCGGCCTTCAAGGACATGGCCGGACGCTTCGCCGACGCCGTCTTCTTCAAG
ATCGATGTCGACGAACTTTCGGAAGTGGCGAGGCAATGGAAAGTGGAGGCCATGCCGACC
TTTGTGTTAATCAAGGGCGGGAAGGAGGTTAGTCGCGTGGTTGGTGCTAAGAAGGATGAA
CTGGAGAGGAAAGTCAACATGTTCATTTCATCCTCCTCATCCTAA

Peptide Sequence

PEP ID

Os03t0800700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33391465:33393588:-1 gene:Os03g0800700 transcript:Os03t0800700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 4 description:Similar to Thioredoxin H-type 5 (TRX-H-5). (Os03t0800700-01)
Sequence

MGSFFSTMFTPPPAADDGGDSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCGPCR
FIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAKKDE
LERKVNMFISSSSS

Transcript Sequence

Transcript ID

Os03t0800700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33391465:33393588:-1 gene:Os03g0800700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 4 description:Similar to Thioredoxin H-type 5 (TRX-H-5). (Os03t0800700-01)
Sequence

AAAAACCAACAAGAAGAGTTGTTGCTTGCGCTCACGCGAAGCGAAGAGGAGCAAGGCGAG
AAAAGAGAGAGAGAGAGAGAGAGAACCAAACCAAGCACGCGACCGAGATGGGCTCCTTCT
TCTCGACGATGTTCACGCCGCCGCCCGCCGCCGACGACGGCGGCGACTCGCGCGTGGTGG
CCGTCCACTCCACGGCCACCTGGGACGAGCAGTGGGGCGCCCACAAGAGCAACCCCAACA
AGCTGATCGTGATCGACTTCTCCGCCACCTGGTGCGGGCCCTGCCGCTTCATCGAGCCGG
CCTTCAAGGACATGGCCGGACGCTTCGCCGACGCCGTCTTCTTCAAGATCGATGTCGACG
AACTTTCGGAAGTGGCGAGGCAATGGAAAGTGGAGGCCATGCCGACCTTTGTGTTAATCA
AGGGCGGGAAGGAGGTTAGTCGCGTGGTTGGTGCTAAGAAGGATGAACTGGAGAGGAAAG
TCAACATGTTCATTTCATCCTCCTCATCCTAAATCCCAAACTTATGCCTGCATTCCTCAT
TTAGTACCAGGCTCTGGTTTCTCTCGGTGCTAGGAGTGAGAGACCCTGTGGTTGTCCTCT
TAAAAATGCTGCAAAATTCGATGTGAAGTGGGAGTAAACGCGTTTAAGACAATAAACTTG
TGATACTTGGGAATGGAAATGTAATTGCCTGTTGCTCTTG