Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0800500-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:33388104:33391000:-1 gene:Os03g0800500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative small multi-drug export family protein. (Os03t0800500-01);Putative small multi-drug export family protein. (Os03t0800500-02)
Sequence	ATGGCCATGGCGGCGGCGTCGGTTCTCGCCGCCTCGTCCTCCTCCTCCCCTCCTCCGCTC GCGCTCGCGTCGTGGAGATGGAGGCCTCCGCCGCCGCCGCCTCTTCTGGCAGTTGCAGGT GCAGCTCGCGGAGCGACAAATCCCAGGCTCGCTCTCCGCCTGAGCGCTGCGGCGTCTCCT CCGGTTACCGGCGAATCTCGCGCCATCGCGGGGACGGGGCGGTGTCTGGTGGCGCCGATG GGTGGGGACGAGACGGAGCGGGATGCGACGGCTGCGACGGCGCCAGACTGGGGCGCGCTC GCGAGGCGGCTGGCTCTGGGCGCGCTGGGGTGCGCCGTGCTCTGCTGCGGCGGTGCGGCG GTGGCGGCGGAGGACTCGATCAAGGCGTCCGGCTTCGGGCTGCGTGTGGCGGCGTCGCTG CGGAGGCTCGGGTGGGCGGACGAGGCCGTCGTGTTCACGCTCGCTACGCTACCGGTGATC GAGCTGCGCGGGGCCATTCCGGTTGGGTACTGGATGCGCCTCGACCCCATCCGCCTCACC GTCCTATCCGTTCTCGGGAACATGGTGCCTGTGCCATTCATTATCCTCTACCTGAAAAAA CTTGCAGCATTTCTCTCTCAAAGAAGCGCATCTGCAACTCGGATTATGGATCTTCTCTTT GAGCGGGCGCGGCAGAAGGCTGCACCTGTTGAGGAATTTCAATGGCTTGGTTTGATGCTG TTTGTGGCTGTACCATTTCCTGGAACTGGAGCATGGACTGGGGCAATAATTTCATCGGTT CTTGGCATGCCATTCTGGTCAGGTTTTTCAGCAAATTTCGTGGGCGTTGTCTTAGCAGGA CTGTTGGTAAATTTGCTTATGAATCTTGGTTTGAAGTATGCCATTATCACTGGTTTAGTT CTGTTCTTTTTATCAACTGTCATGTGGGGTGTCCTTCGATCCCTCAAAAAATCACTGAAT GCTAAATGA

Peptide Sequence

PEP ID	Os03t0800500-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:33388104:33391000:-1 gene:Os03g0800500 transcript:Os03t0800500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative small multi-drug export family protein. (Os03t0800500-01);Putative small multi-drug export family protein. (Os03t0800500-02)
Sequence	MAMAAASVLAASSSSSPPPLALASWRWRPPPPPPLLAVAGAARGATNPRLALRLSAAASP PVTGESRAIAGTGRCLVAPMGGDETERDATAATAPDWGALARRLALGALGCAVLCCGGAA VAAEDSIKASGFGLRVAASLRRLGWADEAVVFTLATLPVIELRGAIPVGYWMRLDPIRLT VLSVLGNMVPVPFIILYLKKLAAFLSQRSASATRIMDLLFERARQKAAPVEEFQWLGLML FVAVPFPGTGAWTGAIISSVLGMPFWSGFSANFVGVVLAGLLVNLLMNLGLKYAIITGLV LFFLSTVMWGVLRSLKKSLNAK

Transcript Sequence

Transcript ID	Os03t0800500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33388104:33391000:-1 gene:Os03g0800500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative small multi-drug export family protein. (Os03t0800500-01);Putative small multi-drug export family protein. (Os03t0800500-02)
Sequence	AATCCGATCCGCGAGAGGCCTCCTCCTCCTCCTCCTCGATCCAGATGGCCATGGCGGCGG CGTCGGTTCTCGCCGCCTCGTCCTCCTCCTCCCCTCCTCCGCTCGCGCTCGCGTCGTGGA GATGGAGGCCTCCGCCGCCGCCGCCTCTTCTGGCAGTTGCAGGTGCAGCTCGCGGAGCGA CAAATCCCAGGCTCGCTCTCCGCCTGAGCGCTGCGGCGTCTCCTCCGGTTACCGGCGAAT CTCGCGCCATCGCGGGGACGGGGCGGTGTCTGGTGGCGCCGATGGGTGGGGACGAGACGG AGCGGGATGCGACGGCTGCGACGGCGCCAGACTGGGGCGCGCTCGCGAGGCGGCTGGCTC TGGGCGCGCTGGGGTGCGCCGTGCTCTGCTGCGGCGGTGCGGCGGTGGCGGCGGAGGACT CGATCAAGGCGTCCGGCTTCGGGCTGCGTGTGGCGGCGTCGCTGCGGAGGCTCGGGTGGG CGGACGAGGCCGTCGTGTTCACGCTCGCTACGCTACCGGTGATCGAGCTGCGCGGGGCCA TTCCGGTTGGGTACTGGATGCGCCTCGACCCCATCCGCCTCACCGTCCTATCCGTTCTCG GGAACATGGTGCCTGTGCCATTCATTATCCTCTACCTGAAAAAACTTGCAGCATTTCTCT CTCAAAGAAGCGCATCTGCAACTCGGATTATGGATCTTCTCTTTGAGCGGGCGCGGCAGA AGGCTGCACCTGTTGAGGAATTTCAATGGCTTGGTTTGATGCTGTTTGTGGCTGTACCAT TTCCTGGAACTGGAGCATGGACTGGGGCAATAATTTCATCGGTTCTTGGCATGCCATTCT GGTCAGGTTTTTCAGCAAATTTCGTGGGCGTTGTCTTAGCAGGACTGTTGGTAAATTTGC TTATGAATCTTGGTTTGAAGTATGCCATTATCACTGGTTTAGTTCTGTTCTTTTTATCAA CTGTCATGTGGGGTGTCCTTCGATCCCTCAAAAAATCACTGAATGCTAAATGATGTAATG AACATGCAACTATTTTTTCGTTGTAAAGAAGAATTCACCCTTGTGAGGGAATTCTAGCTG TAAACTTCTCCCTCTATTTTTCCTATTATACAAAATGAAAATGCTTACCTTTGAGGCC