Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0799000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33304497:33305962:1 gene:Os03g0799000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H1. (Os03t0799000-01)
Sequence

ATGGCGACCGACGTGGCAGCGACTGAGCCCGAGGTGGCGGCGGAGGAGGCTGCGGCCGCC
GCGCCTGAGACCACGGCCACCGCCGGGGATTCCAAGCCGGCGAAGGAGGCCAAGGCCAAG
AAGGCCGCCGCGCCGAGGAAGGCACGCTCCACCGCCACCCACCCGCCGTACGCCGAGATG
ATCTCGGAGGCGATCGCGACGCTGAAGGAGAGGACCGGGTCGAGCCAGTACGCGATCGGC
AAGTTCCTCGAGGACAAGCACAAGGACCACCTGCCATCCAACTTCCGCAAGCAGCTGCTC
GTCCAGATCAAGAAGCTCGTCGCCGCCGGCAAGCTGACCAAGGTCAAGAACTCCTACAAG
TTGCCGCCGACGCGCGCGCCGGCCGCGGCCAAGCCCAAGGCGAAGCCCGCCGCCGCCGCA
AAGCCGAAGCCGAAGCCGAAGGCCGCAGCTAAGCCCAAGGCGGCTGCCAAGCCGAAGGCC
AAGGCTCCAGCCAAGTCCAAGGCCGCCGCGAAGCCTAAGGCGGCTGCCAAGCCAGCCGCG
AAGCCGAAGGCGGCGGCTAAGCCCAAGTCTCCGGCTAAGCCAGCCGCCAAGCCCAAGGCT
GCCCCCAAGGCTAAAGCCAAGCCGGCCGCGAAGCCGAAAGCCAAGGCGGCTCCCAAGCCG
AAGGCGGCAGCCGTGACGAAGACGAAGGCGACCTCGGCTCCCGCCCGGAGGCCGGCGAAG
GCGGCGAAGACGTCAGCCAAGGACACGCCCAGCAAGAAGGCGGCGCCGGCGGCCAAGAAG
CCCGCCGCCGCGGCGAAGAAGGCGCCCGCCAAGAAGGCCGCGCCGGCGAAGAAGGCGGCC
GCTCCGGCGAGGAAGGTGCCCGCCCGGAAGGCGAAGAAGTAG

Peptide Sequence

PEP ID

Os03t0799000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33304497:33305962:1 gene:Os03g0799000 transcript:Os03t0799000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H1. (Os03t0799000-01)
Sequence

MATDVAATEPEVAAEEAAAAAPETTATAGDSKPAKEAKAKKAAAPRKARSTATHPPYAEM
ISEAIATLKERTGSSQYAIGKFLEDKHKDHLPSNFRKQLLVQIKKLVAAGKLTKVKNSYK
LPPTRAPAAAKPKAKPAAAAKPKPKPKAAAKPKAAAKPKAKAPAKSKAAAKPKAAAKPAA
KPKAAAKPKSPAKPAAKPKAAPKAKAKPAAKPKAKAAPKPKAAAVTKTKATSAPARRPAK
AAKTSAKDTPSKKAAPAAKKPAAAAKKAPAKKAAPAKKAAAPARKVPARKAKK

Transcript Sequence

Transcript ID

Os03t0799000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33304497:33305962:1 gene:Os03g0799000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H1. (Os03t0799000-01)
Sequence

ACCCACCCACCGGCGAGCAGCTGCTCCGACAAGCGCTCTCTCTCTCTCTCAACTCCGGCG
AGGCTCACGCGCGCTCCGAAGCTTCGGATAGCGGCAGTAGTCAGTGCATTGATGGCGACC
GACGTGGCAGCGACTGAGCCCGAGGTGGCGGCGGAGGAGGCTGCGGCCGCCGCGCCTGAG
ACCACGGCCACCGCCGGGGATTCCAAGCCGGCGAAGGAGGCCAAGGCCAAGAAGGCCGCC
GCGCCGAGGAAGGCACGCTCCACCGCCACCCACCCGCCGTACGCCGAGATGATCTCGGAG
GCGATCGCGACGCTGAAGGAGAGGACCGGGTCGAGCCAGTACGCGATCGGCAAGTTCCTC
GAGGACAAGCACAAGGACCACCTGCCATCCAACTTCCGCAAGCAGCTGCTCGTCCAGATC
AAGAAGCTCGTCGCCGCCGGCAAGCTGACCAAGGTCAAGAACTCCTACAAGTTGCCGCCG
ACGCGCGCGCCGGCCGCGGCCAAGCCCAAGGCGAAGCCCGCCGCCGCCGCAAAGCCGAAG
CCGAAGCCGAAGGCCGCAGCTAAGCCCAAGGCGGCTGCCAAGCCGAAGGCCAAGGCTCCA
GCCAAGTCCAAGGCCGCCGCGAAGCCTAAGGCGGCTGCCAAGCCAGCCGCGAAGCCGAAG
GCGGCGGCTAAGCCCAAGTCTCCGGCTAAGCCAGCCGCCAAGCCCAAGGCTGCCCCCAAG
GCTAAAGCCAAGCCGGCCGCGAAGCCGAAAGCCAAGGCGGCTCCCAAGCCGAAGGCGGCA
GCCGTGACGAAGACGAAGGCGACCTCGGCTCCCGCCCGGAGGCCGGCGAAGGCGGCGAAG
ACGTCAGCCAAGGACACGCCCAGCAAGAAGGCGGCGCCGGCGGCCAAGAAGCCCGCCGCC
GCGGCGAAGAAGGCGCCCGCCAAGAAGGCCGCGCCGGCGAAGAAGGCGGCCGCTCCGGCG
AGGAAGGTGCCCGCCCGGAAGGCGAAGAAGTAGAGCTCTCTCTCCGGCGAGCGAGCAATC
TAGGGCTTCATGGTTGTTTTCTTAGCTGTTTTTTTTTCTCTTCTCTTTGTTGTTAGTTGC
GAGGAGGGGTCAGGGGTACTAGCTTGTAAATTTGATATCGCGGCGGGGGTACACTGGTCA
TTTCGTACCCAGGTGGTGGTGCGCGACGATGATGACGACGACGACGAGACAGTTTGTTTT
TAGGGCAATGTATTTCTGAGTAGATTGGTGGAGTTTTTATTGTGGTAACAATCTTGTGAT
ATTTGTCGAAATCACTTTAGCTAAGTAATTAATTATGCAGTAATTTTACTTACTGTATTG
GCTTGACCACACCCTGTATTCCTCTGAATTTTCAGATCTGGAAATTGAAATGAAATATAG
GATTTG