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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0798600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33290841:33293309:-1 gene:Os03g0798600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S15 (Fragment). (Os03t0798600-01)
Sequence

ATGGCGGATGTCGAGGTCGAGGCGGAGGTGGCCGCGGCCGGAGCGCCGAAGAAGAGGACG
TTCCGCAAGTACAGCTACCGCGGCGTGGACCTCGACGCGCTCCTCGACATGTCCACCGAC
GACCTCGTCCAGCTCTTCCCCGCGCGCGCCCGCAGAAGGTTCCAGAGGGGCCTGAAGAGG
AAGCCCATGGCGCTCATCAAGAAGCTCCGCAAGGCGAAAAAGGATGCACCTGCTGGTGAG
AAGCCAGAGCCTGTGAGGACCCACCTCAGGAACATGATCATTGTGCCTGAGATGATCGGA
AGCATCGTCGGTGTCTACAACGGCAAGACCTTCAACCAGGTTGAGATCAAGCCTGAGATG
ATTGGCCACTACCTCGCAGAGTTCTCCATCTCGTACAAGCCAGTCAAGCACGGTAGGCCT
GGTATTGGTGCTACCCACTCCTCACGGTTTATCCCTCTCAAGTGA

Peptide Sequence

PEP ID

Os03t0798600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33290841:33293309:-1 gene:Os03g0798600 transcript:Os03t0798600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S15 (Fragment). (Os03t0798600-01)
Sequence

MADVEVEAEVAAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKR
KPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEM
IGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK

Transcript Sequence

Transcript ID

Os03t0798600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33290841:33293309:-1 gene:Os03g0798600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S15 (Fragment). (Os03t0798600-01)
Sequence

CTAACCGCCGCCGCCGCCGTCTCCTCCTCCTCATCCAAGCAGCTCGCGCCTCCGACCCCT
CGCCTCGAGCTCCAGCTCTCCCCAACCCCTTCAACAATGGCGGATGTCGAGGTCGAGGCG
GAGGTGGCCGCGGCCGGAGCGCCGAAGAAGAGGACGTTCCGCAAGTACAGCTACCGCGGC
GTGGACCTCGACGCGCTCCTCGACATGTCCACCGACGACCTCGTCCAGCTCTTCCCCGCG
CGCGCCCGCAGAAGGTTCCAGAGGGGCCTGAAGAGGAAGCCCATGGCGCTCATCAAGAAG
CTCCGCAAGGCGAAAAAGGATGCACCTGCTGGTGAGAAGCCAGAGCCTGTGAGGACCCAC
CTCAGGAACATGATCATTGTGCCTGAGATGATCGGAAGCATCGTCGGTGTCTACAACGGC
AAGACCTTCAACCAGGTTGAGATCAAGCCTGAGATGATTGGCCACTACCTCGCAGAGTTC
TCCATCTCGTACAAGCCAGTCAAGCACGGTAGGCCTGGTATTGGTGCTACCCACTCCTCA
CGGTTTATCCCTCTCAAGTGAGAGATCATCTGCAGCTGTTTGCGCTTCCAGTATGTAGCT
TGAGCTGTCGAACAAGGAACTCCAAAGTACTTTATTAATAGCGTGTCCACCGAGCAGCCA
CTTTTTGAACCTTGGTTAATCTGATGTTATTTCCCCAGATATTTTGAAGTTATATCCAAA
CATGTTATTTCTATTGCAATTATCATCCGTTGAAC