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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0798500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33286651:33288551:1 gene:Os03g0798500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE6 description:WRKY transcription factor, Positive regulation of defense responses (Os03t0798500-01)
Sequence

ATGGATGGGGTGGAGGAGGCGAACATGGCGGCGGTGGAGAGCTCGAAGAAGCTCGTGGCC
ATCCTGTCCAAGTCCGGCGACCCGTTCCGGCTGATGGCGGCCGTCGCGGAGACCGACGAG
GCGGTGTCAAGGTTCGGCAAGGTGGTCACCATCCTCAGCAACAGGGTCGGCCATGCGAGG
GCGAGGCTTGGCAAGAGGAGGAGCTCGCCGCCGGTTGATCCGGGCTGCCTCATGGACCAC
CCGTTGGCGGCGGCGGCGAGCTCTCCTGCTCCCAGCAATGGCCGCCTCCATTTCAGTAGT
AGTGCTGCTACTGCGTCGCCGTCTCCGGCAACGGCGGCGGCGGCTTCCTCCGCCGCGAAC
GTCACGCCGGCGGTGGTTGACCGGAGCTTGTTTCTTGAGACGACGCTCTTGGATTTGAAC
AGTCGCGGCGCTCCTGCTCCAGCTGCATCCATGGCGGCGGCTGCCAAGAACAGCTCGAAG
CTTGCACCTGCACCCATGGTGAACAGCTCCTCCTCCGCAAATCACATCCAGTTCCAGCAG
CCGATGAAGAGCTTTCAGTTCGAGCAGACGCCGATCAGCGACAAGTTCCACATCGAGATG
CCGAGAGGCGTCGGCGGCGGCGGAGGGAAGGAGGTGATCAGCTTCAGCTTCGACAACTCG
GTGTGCACCTCGTCGGCGGCGACCTCCTTCTTCACCTCCATCAGCAGCCAGCTCATCAGC
ATGTCCGACGCCGCCACCAACTCCGCCGCGGCTGCGGCGGCGCCGACGACCAAGAAGCCG
TCGTCGTGCGCCAGGAAGGCCACCGCCGACGACGACGCCGGCGGCAAATGCCATTGCCCA
AAGAAGAAGAAACCCAGGGAGAAGAAGGTGGTCACCGTGCCGGCGATCAGCGACAAGGTC
GCCGATATACCTTCGGACAATTATTCTTGGAGAAAATATGGTCAGAAACCAATCAAAGGC
TCTCCTCATCCAAGGGGATACTACAGGTGCAGCAGCAAGAAGGATTGCCCGGCGAGGAAG
CACGTCGAGAGGTGTCGCAGCGACCCGGCGATGCTGCTCGTCACCTACGAGAACGAACAC
AACCACGCGCAGCCGCTCGATCTCTCCGTAGTGCAGCAAGCCACCGCTAATCCCCAGACC
TGA

Peptide Sequence

PEP ID

Os03t0798500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33286651:33288551:1 gene:Os03g0798500 transcript:Os03t0798500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE6 description:WRKY transcription factor, Positive regulation of defense responses (Os03t0798500-01)
Sequence

MDGVEEANMAAVESSKKLVAILSKSGDPFRLMAAVAETDEAVSRFGKVVTILSNRVGHAR
ARLGKRRSSPPVDPGCLMDHPLAAAASSPAPSNGRLHFSSSAATASPSPATAAAASSAAN
VTPAVVDRSLFLETTLLDLNSRGAPAPAASMAAAAKNSSKLAPAPMVNSSSSANHIQFQQ
PMKSFQFEQTPISDKFHIEMPRGVGGGGGKEVISFSFDNSVCTSSAATSFFTSISSQLIS
MSDAATNSAAAAAAPTTKKPSSCARKATADDDAGGKCHCPKKKKPREKKVVTVPAISDKV
ADIPSDNYSWRKYGQKPIKGSPHPRGYYRCSSKKDCPARKHVERCRSDPAMLLVTYENEH
NHAQPLDLSVVQQATANPQT

Transcript Sequence

Transcript ID

Os03t0798500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33286651:33288551:1 gene:Os03g0798500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE6 description:WRKY transcription factor, Positive regulation of defense responses (Os03t0798500-01)
Sequence

TTTTTCCTACGCCACCATTTCTTGCAATCTTGCAGCTTTTCATCTCTTGTTCCTCCTAGA
TTTTCATAGAGAAATCTGTTTCATCCAATCTTACAAAGCTCCTTTTTTTTTTCTTTTTTC
ATTTTCTTGGTCAAATTTGTTCTTCATCTTTGATCAATTCAGTTACTATTTACTACCTAT
GATCTGCTCATTTCTGCTAGAATTCATTGATTTCTCAGCTGAAAAACACTCACTGTTCCA
TTGCAACACCAAGGGTGCTTGAATTTTACTCGGTTTTCGCCATGGATGGGGTGGAGGAGG
CGAACATGGCGGCGGTGGAGAGCTCGAAGAAGCTCGTGGCCATCCTGTCCAAGTCCGGCG
ACCCGTTCCGGCTGATGGCGGCCGTCGCGGAGACCGACGAGGCGGTGTCAAGGTTCGGCA
AGGTGGTCACCATCCTCAGCAACAGGGTCGGCCATGCGAGGGCGAGGCTTGGCAAGAGGA
GGAGCTCGCCGCCGGTTGATCCGGGCTGCCTCATGGACCACCCGTTGGCGGCGGCGGCGA
GCTCTCCTGCTCCCAGCAATGGCCGCCTCCATTTCAGTAGTAGTGCTGCTACTGCGTCGC
CGTCTCCGGCAACGGCGGCGGCGGCTTCCTCCGCCGCGAACGTCACGCCGGCGGTGGTTG
ACCGGAGCTTGTTTCTTGAGACGACGCTCTTGGATTTGAACAGTCGCGGCGCTCCTGCTC
CAGCTGCATCCATGGCGGCGGCTGCCAAGAACAGCTCGAAGCTTGCACCTGCACCCATGG
TGAACAGCTCCTCCTCCGCAAATCACATCCAGTTCCAGCAGCCGATGAAGAGCTTTCAGT
TCGAGCAGACGCCGATCAGCGACAAGTTCCACATCGAGATGCCGAGAGGCGTCGGCGGCG
GCGGAGGGAAGGAGGTGATCAGCTTCAGCTTCGACAACTCGGTGTGCACCTCGTCGGCGG
CGACCTCCTTCTTCACCTCCATCAGCAGCCAGCTCATCAGCATGTCCGACGCCGCCACCA
ACTCCGCCGCGGCTGCGGCGGCGCCGACGACCAAGAAGCCGTCGTCGTGCGCCAGGAAGG
CCACCGCCGACGACGACGCCGGCGGCAAATGCCATTGCCCAAAGAAGAAGAAACCCAGGG
AGAAGAAGGTGGTCACCGTGCCGGCGATCAGCGACAAGGTCGCCGATATACCTTCGGACA
ATTATTCTTGGAGAAAATATGGTCAGAAACCAATCAAAGGCTCTCCTCATCCAAGGGGAT
ACTACAGGTGCAGCAGCAAGAAGGATTGCCCGGCGAGGAAGCACGTCGAGAGGTGTCGCA
GCGACCCGGCGATGCTGCTCGTCACCTACGAGAACGAACACAACCACGCGCAGCCGCTCG
ATCTCTCCGTAGTGCAGCAAGCCACCGCTAATCCCCAGACCTGATGATCCTTAGCTTAAT
CACCATCCGTGTATCTATCAGCATCACTGCAAATGCAAATGCAAATGCAAAT