Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0798400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33281634:33282656:-1 gene:Os03g0798400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os03t0798400-01)
Sequence

ATGGCCGCCTCCACCGCCTCATGGTCGCGCTACGGCACCGTCCCGCCGGCGGCGGCGGCG
GCGGCGCCTCCCCTGAAGCGCGAGGAGGTGGTGGTGGGCGGGGACGGGGAGGCGGCGGCG
GCGGCGCCCTCGCCGTCGCCCGCGACGGCGGCGGAGGCCGGGGTGGCGTTCTTCTCGCGG
GCGAGGGCGGTGGCGGGCGCCGCGGCGGGGAGGCCGAGGGCGTGGAGGGAGGTGCTCGAC
GCGACGGCGTTCTCGCGCCCGGAGAGCTGCGGGGAGGCGAGGGCGCGGGCGCGGCGGAAC
CTCGCCTACTTCCGCGCCAACTACGCGCTCGCGGCGCTCGTGCTCGTCTTCCTCGGCCTC
GTCTACCGCCCGGTCTCCATGCTCGCCTTCCTCGCGCTCTTCGCCGCCTGGCTCGGCCTC
TACTTCGGCCGCGGCGACGGCGAGCCGCCGCTCGCCTGCATGGGCCGCGAGGTCGACGAC
CGCGTCGTGCTCGCCGCCCTCTCCGTCGCCACCGTCCTCGCCGTCGCGCTCTCCCGCGCC
GGCCTCAACCTGCTCGTCTCGCTCGTCCTCGCCGCCGCCGCCATCGGCGCGCACGCCGCG
TTCCGGATGAACGTGTACCTCGACGAGAGGGACGCGTACGACGGATCGTCCTTCATGGGG
AGCTCCTATGGCGGCTACGCGCTCCCAAGATGA

Peptide Sequence

PEP ID

Os03t0798400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33281634:33282656:-1 gene:Os03g0798400 transcript:Os03t0798400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os03t0798400-01)
Sequence

MAASTASWSRYGTVPPAAAAAAPPLKREEVVVGGDGEAAAAAPSPSPATAAEAGVAFFSR
ARAVAGAAAGRPRAWREVLDATAFSRPESCGEARARARRNLAYFRANYALAALVLVFLGL
VYRPVSMLAFLALFAAWLGLYFGRGDGEPPLACMGREVDDRVVLAALSVATVLAVALSRA
GLNLLVSLVLAAAAIGAHAAFRMNVYLDERDAYDGSSFMGSSYGGYALPR

Transcript Sequence

Transcript ID

Os03t0798400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33281634:33282656:-1 gene:Os03g0798400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os03t0798400-01)
Sequence

AGCTTCCAAATCATTTCCCCTCCTCGTCTCCTCCAGCTAGAATCCGCGGCCTCCTAGATC
CACTCCGATCGCAGCCTAGGGTTCGCCTTCGCCATGGCCGCCTCCACCGCCTCATGGTCG
CGCTACGGCACCGTCCCGCCGGCGGCGGCGGCGGCGGCGCCTCCCCTGAAGCGCGAGGAG
GTGGTGGTGGGCGGGGACGGGGAGGCGGCGGCGGCGGCGCCCTCGCCGTCGCCCGCGACG
GCGGCGGAGGCCGGGGTGGCGTTCTTCTCGCGGGCGAGGGCGGTGGCGGGCGCCGCGGCG
GGGAGGCCGAGGGCGTGGAGGGAGGTGCTCGACGCGACGGCGTTCTCGCGCCCGGAGAGC
TGCGGGGAGGCGAGGGCGCGGGCGCGGCGGAACCTCGCCTACTTCCGCGCCAACTACGCG
CTCGCGGCGCTCGTGCTCGTCTTCCTCGGCCTCGTCTACCGCCCGGTCTCCATGCTCGCC
TTCCTCGCGCTCTTCGCCGCCTGGCTCGGCCTCTACTTCGGCCGCGGCGACGGCGAGCCG
CCGCTCGCCTGCATGGGCCGCGAGGTCGACGACCGCGTCGTGCTCGCCGCCCTCTCCGTC
GCCACCGTCCTCGCCGTCGCGCTCTCCCGCGCCGGCCTCAACCTGCTCGTCTCGCTCGTC
CTCGCCGCCGCCGCCATCGGCGCGCACGCCGCGTTCCGGATGAACGTGTACCTCGACGAG
AGGGACGCGTACGACGGATCGTCCTTCATGGGGAGCTCCTATGGCGGCTACGCGCTCCCA
AGATGAAGAAGCATCAACACACTGAAATGAGATGAGACGAAGGTGTTTTTTTTTCTTCTT
CTAAGAGGATTCTTGATGTGATTCTGATCTTGTGCTTGTGTTCTTGGATTTCTGTAGCTT
GCAATGTTGTGTATAGAATTTTCGTTTTCATTTTTCAAGGGAGTTTTACATTTGTTTGAT
GTAGTATGCTCATTTGGGTGAATTTTTTGGGCTGATTATGATGATTTCAAGTTGCTTTGG
AGG