Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0797800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33246011:33247318:-1 gene:Os03g0797800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA14 description:AUX/IAA protein family protein. (Os03t0797800-01)
Sequence

ATGGCCATGGCGGCGGAGAGCATCGACGCGGAGCTGCGCCTCGGGCTGCCCGGCAGCGGC
GGCGGTGACGGCGTGGCGGCGAAGAAGCGGCGGTCGGCGTCGTCGACGGTGAAGAGCGAG
GCCTCCGGCACGGCCTGCTGCGGCGGCGCCGGCGCCCGGGACGTCGAAGACGGCGCCTCG
CCGGCGTCCAAAGTGCAGGTGGTGGGGTGGCCGCCGGTGGGGTCGTACAGGAGGAGCACG
TTCCAGTCTTCGTCGTCGTCGACGGCGGCGGCGGCGAAGGGGAAGGGCGGCGGCGAGACG
GATCAAGGGAGGAAGAATAAGGGAGGAGGGCTGTACGTGAAGGTGAGCATGGACGGGGCG
CCATACCTCCGCAAGGTCGACCTCCGGATGTACGGCGGCTACAGGGAGCTCAGGGACGCT
CTCGACGCGCTCTTCGGCTGCTTCTCCGCCGACGCCTCCGCCTCCGCCGCCCACTTCGCC
GTCGCCTATGAGGACAAGGACGGCGACCTCATGCTCGCCGGCGACGTGCCCTGGGACATG
TTCATCTCTTCTTGCAAGAAGCTGCGGATAATGCGAGGATCTGAGGCGAGATGA

Peptide Sequence

PEP ID

Os03t0797800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33246011:33247318:-1 gene:Os03g0797800 transcript:Os03t0797800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA14 description:AUX/IAA protein family protein. (Os03t0797800-01)
Sequence

MAMAAESIDAELRLGLPGSGGGDGVAAKKRRSASSTVKSEASGTACCGGAGARDVEDGAS
PASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGA
PYLRKVDLRMYGGYRELRDALDALFGCFSADASASAAHFAVAYEDKDGDLMLAGDVPWDM
FISSCKKLRIMRGSEAR

Transcript Sequence

Transcript ID

Os03t0797800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33246011:33247318:-1 gene:Os03g0797800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA14 description:AUX/IAA protein family protein. (Os03t0797800-01)
Sequence

GACGACGAGGTCAGTGTCGCAGCGACGAACGCCGACGAGCTAGCTCTCTCTCTCGATCGA
TGGCCATGGCGGCGGAGAGCATCGACGCGGAGCTGCGCCTCGGGCTGCCCGGCAGCGGCG
GCGGTGACGGCGTGGCGGCGAAGAAGCGGCGGTCGGCGTCGTCGACGGTGAAGAGCGAGG
CCTCCGGCACGGCCTGCTGCGGCGGCGCCGGCGCCCGGGACGTCGAAGACGGCGCCTCGC
CGGCGTCCAAAGTGCAGGTGGTGGGGTGGCCGCCGGTGGGGTCGTACAGGAGGAGCACGT
TCCAGTCTTCGTCGTCGTCGACGGCGGCGGCGGCGAAGGGGAAGGGCGGCGGCGAGACGG
ATCAAGGGAGGAAGAATAAGGGAGGAGGGCTGTACGTGAAGGTGAGCATGGACGGGGCGC
CATACCTCCGCAAGGTCGACCTCCGGATGTACGGCGGCTACAGGGAGCTCAGGGACGCTC
TCGACGCGCTCTTCGGCTGCTTCTCCGCCGACGCCTCCGCCTCCGCCGCCCACTTCGCCG
TCGCCTATGAGGACAAGGACGGCGACCTCATGCTCGCCGGCGACGTGCCCTGGGACATGT
TCATCTCTTCTTGCAAGAAGCTGCGGATAATGCGAGGATCTGAGGCGAGATGATATATAT
CGAAATCGAAAGGCGTCGAGCTGAAGAAAAAATTTTCGCCGATGCATGCATGGAGTAGAC
ATCTCACAGAAAAAAGGCTTCATGCATGAGAGAGATGAGATCTATCCGTGGACATCGTCA
TGCATGGCGATCGGACGGCTGGCCAAGAAGGACACTTACACGTGGATGCATCTTGTTTTT
GTTCTACGTAGATGTGTAGATGAGATATCCAAGGATCTGAATTCTAAAAAAGTTCAGGAT
TCAGTTGGATCGGAGTTGGTGAGGAGGAGGATATGATCGATCGAGCAGAGCTGCAGTACT
CCTATGTACAGAATAATCTAGCTGAGATTTTGGTTGTTGGAAATGGCAACTGCTAGTTCT
GCAGATTTGTGTACACATGCCTTTTTTTTAAAGCTTTTTTTTTTCTAGCTTCTGTTGTGT
CACTGAAGAAATCTGAGAGCTGAAGAAAGAGAAACTTGGAAGTTTGGTC