Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0795500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33096176:33099400:1 gene:Os03g0795500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin, core domain containing protein. (Os03t0795500-01)
Sequence

ATGGCCGCCGCCACCAACGCCGCCGCCGCCGCCGCCGCCGCTCCGGCCCCAGCTCCGGCG
ACGCCGGTGCCGCGCGGGCAGGTGGATCTGGTCGACTTCATCGACTGGAGCGGCGTCGAG
TGCCTCAACCAGGACCCCGCCCACAGCATCGTTAACGCCCTCAAGCAGGGTTACAGGGAC
GACGAGGGGCTGTACTTGGCCAGCGATTCGGATGAGCAGCTGCTTATCCACATCCCCTTC
ATGCAGGTGGTTAAGCTGCATTCCGCGCTATTCAAGGGCCCCGAGGAAGATGGCCCGAAA
ACAATTAAACTCTTCTGCAACAAAGAGCATATGGGTTTCAGCAATGTCAATGACTATCCA
CCAAGTGACAGTCTTGACCTGTCTTCCAATCATTTATCAGAGAGTAAGCCTATGCAGCTT
AAGTATGTCAAGTTCCAGAATGTTCGCAGCCTGACTATATTTATTGAGGACAATCAAAGT
GGAAGTGATGTCTCAAAAATTCTCAAGATTGCGCTGTACGGAACAACTGTGGACACTACA
AATATGAAGGACCTGAAGAAGATAGAAGAGCATTAA

Peptide Sequence

PEP ID

Os03t0795500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33096176:33099400:1 gene:Os03g0795500 transcript:Os03t0795500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin, core domain containing protein. (Os03t0795500-01)
Sequence

MAAATNAAAAAAAAPAPAPATPVPRGQVDLVDFIDWSGVECLNQDPAHSIVNALKQGYRD
DEGLYLASDSDEQLLIHIPFMQVVKLHSALFKGPEEDGPKTIKLFCNKEHMGFSNVNDYP
PSDSLDLSSNHLSESKPMQLKYVKFQNVRSLTIFIEDNQSGSDVSKILKIALYGTTVDTT
NMKDLKKIEEH

Transcript Sequence

Transcript ID

Os03t0795500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33096176:33099400:1 gene:Os03g0795500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin, core domain containing protein. (Os03t0795500-01)
Sequence

CACCGCGTCGCAGCCGCAACTTCGCAAGGGTCGGAGTCGCACGCGAACCCGCCCGCCTCT
CCACAAGCCATGGCCGCCGCCACCAACGCCGCCGCCGCCGCCGCCGCCGCTCCGGCCCCA
GCTCCGGCGACGCCGGTGCCGCGCGGGCAGGTGGATCTGGTCGACTTCATCGACTGGAGC
GGCGTCGAGTGCCTCAACCAGGACCCCGCCCACAGCATCGTTAACGCCCTCAAGCAGGGT
TACAGGGACGACGAGGGGCTGTACTTGGCCAGCGATTCGGATGAGCAGCTGCTTATCCAC
ATCCCCTTCATGCAGGTGGTTAAGCTGCATTCCGCGCTATTCAAGGGCCCCGAGGAAGAT
GGCCCGAAAACAATTAAACTCTTCTGCAACAAAGAGCATATGGGTTTCAGCAATGTCAAT
GACTATCCACCAAGTGACAGTCTTGACCTGTCTTCCAATCATTTATCAGAGAGTAAGCCT
ATGCAGCTTAAGTATGTCAAGTTCCAGAATGTTCGCAGCCTGACTATATTTATTGAGGAC
AATCAAAGTGGAAGTGATGTCTCAAAAATTCTCAAGATTGCGCTGTACGGAACAACTGTG
GACACTACAAATATGAAGGACCTGAAGAAGATAGAAGAGCATTAAGACCATACGAAGCTA
GCATGTTCCAATGGGTGTATGGCACAAAAAACAGTTAACAATTGAATTTCTAGTTGATCT
TGGCAACTTTGCGCCCCATTTTATACATGAGGAATTTGAGAGCCGCAGGATCTGGTGGAG
ATACCATACATTTGCCTCTTGGCCTCGGGCTTTACCTTGTAGTGCTACCGATGGCTTGAT
GTGGCAAGCGAATTCATATGTTTCCTCTTTAAGAAATTCATATTTGGAGTTGTGGTGGTA
CCTTCTTGATCGATCGATCGATCTGCTTCACAGTAACCGTTACATGTTTCTTAAGAAATT
CATATTTGGAGTTGTGGTGGTACTTGTTAGATCGATCGATCTGCGTCACAGCAACTGTTG
CATATGTTTAGCTTGTGTTTGTTTGCCTGTCTTAGTTAACTGGGAACCAAACTTGTGGTC
ATTCGGTCAATTTGCTATGTCATGACAAGATGATTCAAACT