Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0793500-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:32999556:33006651:1 gene:Os03g0793500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEDAING DATE 16 description:Casein kinase I, Photoperiodic control of flowering time, Long-day repression (Os03t0793500-01);Similar to Casein kinase-like protein. (Os03t0793500-02)
Sequence	ATGCCAGAGTTGCGGGGTGGTGTTTGGAGAGCTCGTCTGAGGTCCAAGAAGGTTTACGAC GTCCAGGACGCAGATCCAGCTGCGAGTCCGGTGTCGCCAGCTCCGCGGGGGAGGACTGGA AGGCGCGGCGGTGCTGCGGCTGGCAGAGGCAACAAGACAGTTGCTGAGGGAGGAGGGAGG AAAGCTCTGAAGCCTAGAGGAAAGGGGTGCAGGGCTGTTGATTTGTGTAAGGATCAACCT TGCAAGGACCTCCCTGAAGTTATTGCTAGAAAGGCGGTTACCGGCAAAGCCCAGGAGGAC CTTGGTTTGAACAAGGTAGCTGACAGAGCTGCGAACTTGATGATGGACGGCGAAAGTGGA GACAAATTTGCTGCGGCAGAAGATGAATCCACTACAACACCAGTTCCTGAGCGGGTTCAA GTAGGCAATTCCCCAGAGTATATAACTGATAGGAAGTTGGGTAAAGGTGGATTTGGTCAG GTCTATGTTGGTCGAAGAGTATCTGGTGGAGGTTCTCGCACGGGTCCAGATGCGCAAGAG GTTGCGCTTAAATTTGAGCACCGAAGCAGTAAAGGATGTAACTATGGCCCTCCATACGAG TGGCAGGTTTACCACACTCTCAATGGTTGTTATGGCATACCATCAGTCCACTATAAGGGT CGTTTGGGAGACTACTACATTCTTGTAATGGATATGCTTGGTCCCAGCCTCTGGGATGTG TGGAATTCAGTGGGACAGGCGATGTCTGCCCATATGGTTGCTTGCATTGCTGTGGAAGCG ATATCAATTCTTGAGAAGCTTCACTCTAAAGGGTTTGTACATGGTGATGTCAAACCAGAG AATTTTTTGCTTGGTCATCCTGGGTCAGTTGATGAGAAGAAGCTTTTCCTGATTGATCTT GGTTTAGCATCCAGGTGGAAAGAAGCATCATCTGGTCAGCATGTTGACTATGATCAGAGG CCAGATGTCTTTAGGGGAACAATTAGATACGCTAGCGTCCATGCCCACTTAGGTCGTACA GGTAGCAGGAGGGATGATTTAGAGTCACTGGCTTACACCCTAATCTTTTTAATAAGAGGG AGATTACCTTGGCAAGGGTATCAGGGAGATAACAAGAGTTTTCTTGTTTGTAAGAAGAAA ATGGCTACTTCACCAGAGTTGCTGTGTTGCTTCTGTCCAGCTCCGTTCAAACATTTTCTA GAGATGGTCACTAACATGAAATTTGACGAAGAGCCAAACTATCCAAAACTTATTTCTCTC TTTGATGGTTTGATTGAAGGGCCTGCTTCAAGGCCCATCAGAATTGATGGAGCTCTGAAG GTTGGGCAAAAACGTGGAAGAATGGTTGTAAATCTTGACGATGATGAACAGCCCAAGAAG AAAGTTAGGTTGGGAAGCCCAGCAACTCAATGGATCTCAGTTTATAATGCTAGGCGGCCC ATGAAGCAGAGATATCACTATAATGTTGCTGATTCAAGGCTGCATCAGCATATAGAAAAA GGCAATGAAGATGGGCTGTACATTAGTTGTGTCTCTTCTTCCGCAAATTTTTGGGCTCTC ATAATGGATGCTGGGACTGGCTTTTGTTCCCAAGTTTATGAGCTTTCACAAGTGTTTCTG CACAAGGATTGGATTATGGAGCAGTGGGAGAAGAATTATTACATAACGGCAATAGCAGGA GCAACCAATGGAAGCTCATTGGTTGTAATGTCCAAAGGAACTCCATACACACAGCAGTCA TACAAAGTCAGTGAATCCTTTCCTTACAAGTGGATTAACAAAAAGTGGAAAGAAGGTTTC CATGTGACATCTATGGCTACTGCTGGAAACCGTTGGGGAGTTGTCATGTCAAGAAATGCA GGCTATTCCCATCAGGTGGTAGAGTTGGACTTTCTATATCCAAGTGAAGGGATCCATCGG CGATGGGAGACAGGTTACAGAATAACTTCGACTGCAGCAACTCCTGACCAAGCTGCCTTC ATCTTGAGCATACCAAAGAGGAAGCCAATGGACGAGACACAAGAAACTCTTCGAACTTCC TCCTTTCCCAGCAACCATGTCAAGGAAAAATGGTCAAAGAACCTATACATCGCTTCAATC TGCTACGGCCGGACCGTATGCTGA

Peptide Sequence

PEP ID	Os03t0793500-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:32999556:33006651:1 gene:Os03g0793500 transcript:Os03t0793500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEDAING DATE 16 description:Casein kinase I, Photoperiodic control of flowering time, Long-day repression (Os03t0793500-01);Similar to Casein kinase-like protein. (Os03t0793500-02)
Sequence	MPELRGGVWRARLRSKKVYDVQDADPAASPVSPAPRGRTGRRGGAAAGRGNKTVAEGGGR KALKPRGKGCRAVDLCKDQPCKDLPEVIARKAVTGKAQEDLGLNKVADRAANLMMDGESG DKFAAAEDESTTTPVPERVQVGNSPEYITDRKLGKGGFGQVYVGRRVSGGGSRTGPDAQE VALKFEHRSSKGCNYGPPYEWQVYHTLNGCYGIPSVHYKGRLGDYYILVMDMLGPSLWDV WNSVGQAMSAHMVACIAVEAISILEKLHSKGFVHGDVKPENFLLGHPGSVDEKKLFLIDL GLASRWKEASSGQHVDYDQRPDVFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIRG RLPWQGYQGDNKSFLVCKKKMATSPELLCCFCPAPFKHFLEMVTNMKFDEEPNYPKLISL FDGLIEGPASRPIRIDGALKVGQKRGRMVVNLDDDEQPKKKVRLGSPATQWISVYNARRP MKQRYHYNVADSRLHQHIEKGNEDGLYISCVSSSANFWALIMDAGTGFCSQVYELSQVFL HKDWIMEQWEKNYYITAIAGATNGSSLVVMSKGTPYTQQSYKVSESFPYKWINKKWKEGF HVTSMATAGNRWGVVMSRNAGYSHQVVELDFLYPSEGIHRRWETGYRITSTAATPDQAAF ILSIPKRKPMDETQETLRTSSFPSNHVKEKWSKNLYIASICYGRTVC

Transcript Sequence

Transcript ID	Os03t0793500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:32999556:33006651:1 gene:Os03g0793500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEDAING DATE 16 description:Casein kinase I, Photoperiodic control of flowering time, Long-day repression (Os03t0793500-01);Similar to Casein kinase-like protein. (Os03t0793500-02)
Sequence	CACGCGAGCGACGCGAGCGCTCCACGATTTCTCTGCCTCCCCCCCCCCCTCGGTCTCCTC CTCCCCCACCACCACCGCACGCTTCCCGAGGCGCCGCCCTCCGCCGCCGCGGGCATCCGC TTCCGACGACGATATTGGAAGGAGCACCGAAGGGTGTAGCACAAGGCCGAGTTGCATGGG GCGATAATGCCAGAGTTGCGGGGTGGTGTTTGGAGAGCTCGTCTGAGGTCCAAGAAGGTT TACGACGTCCAGGACGCAGATCCAGCTGCGAGTCCGGTGTCGCCAGCTCCGCGGGGGAGG ACTGGAAGGCGCGGCGGTGCTGCGGCTGGCAGAGGCAACAAGACAGTTGCTGAGGGAGGA GGGAGGAAAGCTCTGAAGCCTAGAGGAAAGGGGTGCAGGGCTGTTGATTTGTGTAAGGAT CAACCTTGCAAGGACCTCCCTGAAGTTATTGCTAGAAAGGCGGTTACCGGCAAAGCCCAG GAGGACCTTGGTTTGAACAAGGTAGCTGACAGAGCTGCGAACTTGATGATGGACGGCGAA AGTGGAGACAAATTTGCTGCGGCAGAAGATGAATCCACTACAACACCAGTTCCTGAGCGG GTTCAAGTAGGCAATTCCCCAGAGTATATAACTGATAGGAAGTTGGGTAAAGGTGGATTT GGTCAGGTCTATGTTGGTCGAAGAGTATCTGGTGGAGGTTCTCGCACGGGTCCAGATGCG CAAGAGGTTGCGCTTAAATTTGAGCACCGAAGCAGTAAAGGATGTAACTATGGCCCTCCA TACGAGTGGCAGGTTTACCACACTCTCAATGGTTGTTATGGCATACCATCAGTCCACTAT AAGGGTCGTTTGGGAGACTACTACATTCTTGTAATGGATATGCTTGGTCCCAGCCTCTGG GATGTGTGGAATTCAGTGGGACAGGCGATGTCTGCCCATATGGTTGCTTGCATTGCTGTG GAAGCGATATCAATTCTTGAGAAGCTTCACTCTAAAGGGTTTGTACATGGTGATGTCAAA CCAGAGAATTTTTTGCTTGGTCATCCTGGGTCAGTTGATGAGAAGAAGCTTTTCCTGATT GATCTTGGTTTAGCATCCAGGTGGAAAGAAGCATCATCTGGTCAGCATGTTGACTATGAT CAGAGGCCAGATGTCTTTAGGGGAACAATTAGATACGCTAGCGTCCATGCCCACTTAGGT CGTACAGGTAGCAGGAGGGATGATTTAGAGTCACTGGCTTACACCCTAATCTTTTTAATA AGAGGGAGATTACCTTGGCAAGGGTATCAGGGAGATAACAAGAGTTTTCTTGTTTGTAAG AAGAAAATGGCTACTTCACCAGAGTTGCTGTGTTGCTTCTGTCCAGCTCCGTTCAAACAT TTTCTAGAGATGGTCACTAACATGAAATTTGACGAAGAGCCAAACTATCCAAAACTTATT TCTCTCTTTGATGGTTTGATTGAAGGGCCTGCTTCAAGGCCCATCAGAATTGATGGAGCT CTGAAGGTTGGGCAAAAACGTGGAAGAATGGTTGTAAATCTTGACGATGATGAACAGCCC AAGAAGAAAGTTAGGTTGGGAAGCCCAGCAACTCAATGGATCTCAGTTTATAATGCTAGG CGGCCCATGAAGCAGAGATATCACTATAATGTTGCTGATTCAAGGCTGCATCAGCATATA GAAAAAGGCAATGAAGATGGGCTGTACATTAGTTGTGTCTCTTCTTCCGCAAATTTTTGG GCTCTCATAATGGATGCTGGGACTGGCTTTTGTTCCCAAGTTTATGAGCTTTCACAAGTG TTTCTGCACAAGGATTGGATTATGGAGCAGTGGGAGAAGAATTATTACATAACGGCAATA GCAGGAGCAACCAATGGAAGCTCATTGGTTGTAATGTCCAAAGGAACTCCATACACACAG CAGTCATACAAAGTCAGTGAATCCTTTCCTTACAAGTGGATTAACAAAAAGTGGAAAGAA GGTTTCCATGTGACATCTATGGCTACTGCTGGAAACCGTTGGGGAGTTGTCATGTCAAGA AATGCAGGCTATTCCCATCAGGTGGTAGAGTTGGACTTTCTATATCCAAGTGAAGGGATC CATCGGCGATGGGAGACAGGTTACAGAATAACTTCGACTGCAGCAACTCCTGACCAAGCT GCCTTCATCTTGAGCATACCAAAGAGGAAGCCAATGGACGAGACACAAGAAACTCTTCGA ACTTCCTCCTTTCCCAGCAACCATGTCAAGGAAAAATGGTCAAAGAACCTATACATCGCT TCAATCTGCTACGGCCGGACCGTATGCTGACAGCTTCAACATTTCGAAGCTCCAATGTGA AGCCATGTCTAGCTACTACTAGCATTTTGCAGTGAGCTGCCAACCGATCAAATCTCCCTT GATTGGGAGATCTGAAGCAAGG