Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0791500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:32911242:32915158:-1 gene:Os03g0791500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 25.3 kDa vesicle transport protein. (Os03t0791500-01)
Sequence

ATGGTGAAGCTGACAATGGTAGCACGTGTCACTGATGGCCTTCCACTGGCAGAAGGGTTG
GATGATGGACGGGATCAGAAGGACGCTGACTTTTACAAGCAGCAAGCTAAACTTCTTTTC
AAAAACTTATCAAAGGGGCAACATGAAGCCTCGCGGATGTCAATTGAGACTGGGCCATAC
TTTTTTCATTACATCATTGAGGGGCGAGTATGTTATCTGACAATGTGTGACCGTTCTTAT
CCAAAGAAACTTGCATTCCAGTACCTAGAAGATCTGAAAAACGAATTTGAAAGAGTCAAT
GGCAGTCAAATCGAAACAGCTGCAAGGCCATATGCCTTTATTAAGTTTGACACATTCATT
CAGAAGACTAAGAAACTTTATTTGGACACTAGAACCCAGAGGAATCTTGCGAAATTGAAT
GATGAGCTCTATGAGGTGCATCAGATTATGACTCGCAATGTTCAAGAAGTTCTTGGTGTC
GGTGAAAAGCTAGACCAGGTCACTGAAATGTCAACTAGGTTGACTTCTGACACAAGAATG
TATGCAGATAAGGCTAAGGATCTCAATCGCCAGGCCTTGATTCGGAAGTATGCCCCCGTT
GCCATTGTGATCGGTGTAGTTTTGATGCTCTTTTGGTTGAAGAACAAGATATGGTAA

Peptide Sequence

PEP ID

Os03t0791500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:32911242:32915158:-1 gene:Os03g0791500 transcript:Os03t0791500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 25.3 kDa vesicle transport protein. (Os03t0791500-01)
Sequence

MVKLTMVARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPY
FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVTEMSTRLTSDTRM
YADKAKDLNRQALIRKYAPVAIVIGVVLMLFWLKNKIW

Transcript Sequence

Transcript ID

Os03t0791500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32911242:32915158:-1 gene:Os03g0791500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 25.3 kDa vesicle transport protein. (Os03t0791500-01)
Sequence

GAGAAGTGAAGAGGACGAAACGGCGGTGGGCTCTCGAAACTTCCGGGCTCCGGCGACTCC
GCCGGCCGCGATCTCCTCCTCCTCCTCCTCTCCGGCTCTTCCCGGAGACGACCAACTCCC
TCCTTCCTGTTCATTTGGTATTCTGGTGCAGTTTGCAGTGGTTTCTGGCCTTCTTGACAA
AATGGTGAAGCTGACAATGGTAGCACGTGTCACTGATGGCCTTCCACTGGCAGAAGGGTT
GGATGATGGACGGGATCAGAAGGACGCTGACTTTTACAAGCAGCAAGCTAAACTTCTTTT
CAAAAACTTATCAAAGGGGCAACATGAAGCCTCGCGGATGTCAATTGAGACTGGGCCATA
CTTTTTTCATTACATCATTGAGGGGCGAGTATGTTATCTGACAATGTGTGACCGTTCTTA
TCCAAAGAAACTTGCATTCCAGTACCTAGAAGATCTGAAAAACGAATTTGAAAGAGTCAA
TGGCAGTCAAATCGAAACAGCTGCAAGGCCATATGCCTTTATTAAGTTTGACACATTCAT
TCAGAAGACTAAGAAACTTTATTTGGACACTAGAACCCAGAGGAATCTTGCGAAATTGAA
TGATGAGCTCTATGAGGTGCATCAGATTATGACTCGCAATGTTCAAGAAGTTCTTGGTGT
CGGTGAAAAGCTAGACCAGGTCACTGAAATGTCAACTAGGTTGACTTCTGACACAAGAAT
GTATGCAGATAAGGCTAAGGATCTCAATCGCCAGGCCTTGATTCGGAAGTATGCCCCCGT
TGCCATTGTGATCGGTGTAGTTTTGATGCTCTTTTGGTTGAAGAACAAGATATGGTAACT
GCACCAAATGAAGGAAGCTGGGCCTGCGTTACAACACTGGAGAAAGAAAAACAAAAAAAT
TAGGTTGATTCTGGATCAATAGTGCTTTGGTGACGTGTATCCCGTATCTGCCCATTCAAG
CGAGTACTTCAGCTGCCCTTTTACCCTCCTCCTCACTACAAAGCTATTCAAGTCAATTCG
TTGTAGCATAGGCCTTATGACGGACTTGATTTTGTAAATCCTTGGAACTGTACATATAAG
AGCTCTGTAGAGTTGAGTTTTCGGTATTGGGATGGGATTGTATTCTTTTGCAAACTCAAC
TCATGTAAGAATTCAGGCTGAATATCGTATACTCCATATCTCTTGGACT