Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0790900-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:32879424:32884577:-1 gene:Os03g0790900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Indole-3-acetaldehyde oxidase 3 description:Similar to Aldehyde oxidase-2. (Os03t0790900-01);Similar to aldehyde oxidase-2. (Os03t0790900-02);Similar to aldehyde oxidase-2. (Os03t0790900-03);Similar to Aldehyde oxidase-2. (Os03t0790900-04)
Sequence	CAAGCGAATGGTGGCGCTCCGGCGGTGGCGGTCACCGGAGACGGCTGGTTCCACCCCAAG AGCGTCGAGGAGTTCCACAGGTTGTTTGACTCTAACCTGTTCGACGAAAGGTCTGTGAAG ATTGTGGCATCGAACACCGGCTCCGGAGTGTACAAGGATCAAGACCTCCATGACAAGTAC ATCAACATCTCGCAGATTCTGGAACTCTCAGCCATCAATAGAAGCAGCAAGGGCGTCGAG ATCGGAGCTGTCGTGTCTATCTCCAAAGCCATTGAGATATTGTCGGATGGAGGCGCAGTG TTCAGAAAGATTGCCGATCACCTGAGCAAAGTGGCCTCGTCGTTCGTCCAGAACACGGCG ACCATTGGAGGCAACATCATCATGGCGCAGAGGCTGTCTTTCCCGTCGGACATCGCAACG GTTCTTCTCGCTGCAGGATCAACTGTCACCATCCAGGTGGCCGCCAAGAGGATGTGCATC ACTCTGGAGGAGTTCTTGAAGCAGCCTCCATGTGATTCCAGGACGTTGTTGGTCAGCATC TCTATCCCGGATTGGGGTTCAGATGATGGCATCACCTTTGAGTCGTTTCGTGCGGCTCCT CGTCCACTTGGCAATGCTGTGTCATATGTTAATTCTGCATTCTTGGCAAGAAGTTCAGTG GATGGATCATCAGGGAGCCATCTCATTGAGGATGTTTGCTTGGCATTTGGCGCCTTCGGG GCCGAACACGCCATCAGAGCTAGGGAGGTTGAGGAGTTCTTGAAGGGAAAATTGGTTAGT GCACCAGTGATACTTGAAGCAGTTCGGCTTCTTAAAGGTGTTGTTTCACCAGCTGAAGGC ACAACACATCCTGAATACAGAGTCAGCTTGGCCGTCAGTTATCTGTTCAGATTCCTGACT TCCCTTGCTAATGGCTTGGATGAGCCTGAAAATGCTAATGTTCCCAATGGTTCATGTACT AATGGAACCGCAAACGGTAGCGCTAATTCCTCTCCGGAGAAGCACTCAAATGTTGACAGC TCTGATTTGCCAATAAAATCAAGGCAAGAGATGGTTTTCTCTGATGAATACAAACCTGTT GGAAAGCCGATCGAGAAAACCGGAGCAGAGCTCCAAGCTTCTGGAGAGGCAGTGTATGTT GATGACATCCCTGCTCCGAAGGATTGCCTCTATGGAGCATTTATCTATAGCACACACCCT CACGCTCACATAAAAGATATAAACTTCAGATCATCTTTGGCTTCACAGAAGGTCATCACA GTTATCACTGCAAAGGACATTCCTACCGGTGGAGAAAATATTGGATCATGCTTCCCAATG CTTGGAGATGAAGCGCTTTTCGTTCATCCTGTTTCTGAATTTGCCGGCCAGAATATTGGT GTTGTGATTGCTGAAACACAAAAGTATGCCTATATGGCGGCGAAGCAAGCTGTGATCGAA TATAGTACCGAAAATCTTCAGCCACCAATTCTGACAATAGAAGATGCTGTCCAGCATAAC AGCTACTTCCCAGTTCCCCCATTTTTAGCTCCTACGCCAATTGGTGACTTCAACCAAGCT ATGTCTGAAGCTGATCACAAGATCATAGATGGGGAGGTGAAACTTGAATCCCAGTACTAT TTCTACATGGAGACACAGACGGCCTTAGCTATCCCTGATGAAGATAACTGTATAACCCTC TATGTGTCGGCGCAACTACCTGAGATTACTCAAAATACTGTTGCGAGGTGCCTTGGCATT CCATATCACAATGTCCGTATCATCACGAGAAGAGTTGGAGGAGGTTTTGGTGGAAAGGCA ATGAAAGCAATACATGTTGCCGCTGCATGTGCTGTCGCCGCATTCAAGCTGCGGCGTCCG GTTCGAATGTACCTCGATCGCAAGACAGACATGATCATGGCGGGAGGGCGGCATCCGATG AAGGTAAAGTACTCCGTCGGTTTCAAGTCCGACGGCAAGATCACGGGTCTGCACTTTGAT CTTGGAATGAACGGCGGAATATCGCCGGATTGCAGCCCGGTGTTGCCAGTCGCCATTGTC GGGGCTCTGAAGAAGTACAACTGGGGCGCTCTCTCCTTCGACATCAAGGTCTGCAAGACG AACGTCTCGTCGAAGTCGGCGATGCGGGCTCCCGGCGACGCGCAGGGCTCGTTCATCGCC GAGGCCATCGTCGAACACATCGCGTCCACTCTCTCAGTGGACACGAACGCCATCAGGAGG AAGAACCTCCACGACTTCGAGAGCCTCAAGGTGTTTTATGGGAATAGCGCCGGTGATCCT TCGACGTACAGTCTCGTCACCATCTTCGACAAGCTGGCCTCGTCGCCGGAGTACCAGCAG AGGGCCGCCATGGTCGAGCACTTCAACGCCGGCAACAGGTGGAAGAAGCGGGGCATTTCT TGCGTGCCGATCACCTACGACGTGAGGCTCCGGCCAACTCCGGGGAAGGTGTCCATCATG AACGACGGCTCCATCGCCGTTGAGGTCGGCGGCGTCGAGATCGGGCAGGGGCTGTGGACG AAAGTGAAGCAGATGACAGCGTTCGCGCTGGGCCAGCTCTGCGATGATGGCGGCGAGGGC CTCATCGACAAGGTCCGTGTCATCCAGGCCGACACCCTGAGCATGATCCAGGGAGGCTTC ACCGGTGGGAGCACGACCTCCGAGACTAGCTGCGAGGCTGTTCGGAAGTCGTGCGCCGCC CTCGTGGAGAGGTTGAAGCCCATCAAAGAGAAGGCTGGCACGCCACCATGGAAATCCCTT ATTGCCCAGGCAAGCATGGCGAGTGTGAAGCTGACAGAGCACGCGTACTGGACGCCTGAC CCCACGTTCACTAGCTACTTGAACTATGGAGCTGCAATTAGTGAGGTGGAAGTCGATGTG CTGACGGGAGAAACCACCATCCTGAGGAGCGACCTCGTGTACGACTGTGGGCAGAGCCTG AATCCTGCTGTGGACTTGGGCCAGGTGGAAGGCGCATTCGTGCAAGGGATCGGCTTCTTC ACGAACGAGGAGTACACGACCAACTCCGATGGGCTGGTCATCAACGACGGCACGTGGACG TACAAGATCCCCACCGTGGACACCATCCCCAAGCAGTTCAACGTCGAGCTCATCAACAGC GCCCGCGATCACAAGCGCGTCCTCTCCTCCAAAGCGTCCGGTGAGCCGCCGCTGCTGCTG GCGTCGTCGGTGCACTGCGCGATGAGGGAGGCGATCAGGGCGGCCAGGAAGGAGTTCGCC GGCGCCGGAGGCTCGCCGCTGACGTTCCAGATGGACGTGCCGGCGACGATGCCGATCGTC AAGGAGCTCTGCGGCCTTGACGTCGTGGAGAGATATCTCGAGAGCTTTGCTGCCAAAGCC TAG

Peptide Sequence

PEP ID	Os03t0790900-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:32879424:32884577:-1 gene:Os03g0790900 transcript:Os03t0790900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Indole-3-acetaldehyde oxidase 3 description:Similar to Aldehyde oxidase-2. (Os03t0790900-01);Similar to aldehyde oxidase-2. (Os03t0790900-02);Similar to aldehyde oxidase-2. (Os03t0790900-03);Similar to Aldehyde oxidase-2. (Os03t0790900-04)
Sequence	QANGGAPAVAVTGDGWFHPKSVEEFHRLFDSNLFDERSVKIVASNTGSGVYKDQDLHDKY INISQILELSAINRSSKGVEIGAVVSISKAIEILSDGGAVFRKIADHLSKVASSFVQNTA TIGGNIIMAQRLSFPSDIATVLLAAGSTVTIQVAAKRMCITLEEFLKQPPCDSRTLLVSI SIPDWGSDDGITFESFRAAPRPLGNAVSYVNSAFLARSSVDGSSGSHLIEDVCLAFGAFG AEHAIRAREVEEFLKGKLVSAPVILEAVRLLKGVVSPAEGTTHPEYRVSLAVSYLFRFLT SLANGLDEPENANVPNGSCTNGTANGSANSSPEKHSNVDSSDLPIKSRQEMVFSDEYKPV GKPIEKTGAELQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHIKDINFRSSLASQKVIT VITAKDIPTGGENIGSCFPMLGDEALFVHPVSEFAGQNIGVVIAETQKYAYMAAKQAVIE YSTENLQPPILTIEDAVQHNSYFPVPPFLAPTPIGDFNQAMSEADHKIIDGEVKLESQYY FYMETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRIITRRVGGGFGGKA MKAIHVAAACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVGFKSDGKITGLHFD LGMNGGISPDCSPVLPVAIVGALKKYNWGALSFDIKVCKTNVSSKSAMRAPGDAQGSFIA EAIVEHIASTLSVDTNAIRRKNLHDFESLKVFYGNSAGDPSTYSLVTIFDKLASSPEYQQ RAAMVEHFNAGNRWKKRGISCVPITYDVRLRPTPGKVSIMNDGSIAVEVGGVEIGQGLWT KVKQMTAFALGQLCDDGGEGLIDKVRVIQADTLSMIQGGFTGGSTTSETSCEAVRKSCAA LVERLKPIKEKAGTPPWKSLIAQASMASVKLTEHAYWTPDPTFTSYLNYGAAISEVEVDV LTGETTILRSDLVYDCGQSLNPAVDLGQVEGAFVQGIGFFTNEEYTTNSDGLVINDGTWT YKIPTVDTIPKQFNVELINSARDHKRVLSSKASGEPPLLLASSVHCAMREAIRAARKEFA GAGGSPLTFQMDVPATMPIVKELCGLDVVERYLESFAAKA

Transcript Sequence

Transcript ID	Os03t0790900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:32879424:32884577:-1 gene:Os03g0790900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Indole-3-acetaldehyde oxidase 3 description:Similar to Aldehyde oxidase-2. (Os03t0790900-01);Similar to aldehyde oxidase-2. (Os03t0790900-02);Similar to aldehyde oxidase-2. (Os03t0790900-03);Similar to Aldehyde oxidase-2. (Os03t0790900-04)
Sequence	CAAGCGAATGGTGGCGCTCCGGCGGTGGCGGTCACCGGAGACGGCTGGTTCCACCCCAAG AGCGTCGAGGAGTTCCACAGGTTGTTTGACTCTAACCTGTTCGACGAAAGGTCTGTGAAG ATTGTGGCATCGAACACCGGCTCCGGAGTGTACAAGGATCAAGACCTCCATGACAAGTAC ATCAACATCTCGCAGATTCTGGAACTCTCAGCCATCAATAGAAGCAGCAAGGGCGTCGAG ATCGGAGCTGTCGTGTCTATCTCCAAAGCCATTGAGATATTGTCGGATGGAGGCGCAGTG TTCAGAAAGATTGCCGATCACCTGAGCAAAGTGGCCTCGTCGTTCGTCCAGAACACGGCG ACCATTGGAGGCAACATCATCATGGCGCAGAGGCTGTCTTTCCCGTCGGACATCGCAACG GTTCTTCTCGCTGCAGGATCAACTGTCACCATCCAGGTGGCCGCCAAGAGGATGTGCATC ACTCTGGAGGAGTTCTTGAAGCAGCCTCCATGTGATTCCAGGACGTTGTTGGTCAGCATC TCTATCCCGGATTGGGGTTCAGATGATGGCATCACCTTTGAGTCGTTTCGTGCGGCTCCT CGTCCACTTGGCAATGCTGTGTCATATGTTAATTCTGCATTCTTGGCAAGAAGTTCAGTG GATGGATCATCAGGGAGCCATCTCATTGAGGATGTTTGCTTGGCATTTGGCGCCTTCGGG GCCGAACACGCCATCAGAGCTAGGGAGGTTGAGGAGTTCTTGAAGGGAAAATTGGTTAGT GCACCAGTGATACTTGAAGCAGTTCGGCTTCTTAAAGGTGTTGTTTCACCAGCTGAAGGC ACAACACATCCTGAATACAGAGTCAGCTTGGCCGTCAGTTATCTGTTCAGATTCCTGACT TCCCTTGCTAATGGCTTGGATGAGCCTGAAAATGCTAATGTTCCCAATGGTTCATGTACT AATGGAACCGCAAACGGTAGCGCTAATTCCTCTCCGGAGAAGCACTCAAATGTTGACAGC TCTGATTTGCCAATAAAATCAAGGCAAGAGATGGTTTTCTCTGATGAATACAAACCTGTT GGAAAGCCGATCGAGAAAACCGGAGCAGAGCTCCAAGCTTCTGGAGAGGCAGTGTATGTT GATGACATCCCTGCTCCGAAGGATTGCCTCTATGGAGCATTTATCTATAGCACACACCCT CACGCTCACATAAAAGATATAAACTTCAGATCATCTTTGGCTTCACAGAAGGTCATCACA GTTATCACTGCAAAGGACATTCCTACCGGTGGAGAAAATATTGGATCATGCTTCCCAATG CTTGGAGATGAAGCGCTTTTCGTTCATCCTGTTTCTGAATTTGCCGGCCAGAATATTGGT GTTGTGATTGCTGAAACACAAAAGTATGCCTATATGGCGGCGAAGCAAGCTGTGATCGAA TATAGTACCGAAAATCTTCAGCCACCAATTCTGACAATAGAAGATGCTGTCCAGCATAAC AGCTACTTCCCAGTTCCCCCATTTTTAGCTCCTACGCCAATTGGTGACTTCAACCAAGCT ATGTCTGAAGCTGATCACAAGATCATAGATGGGGAGGTGAAACTTGAATCCCAGTACTAT TTCTACATGGAGACACAGACGGCCTTAGCTATCCCTGATGAAGATAACTGTATAACCCTC TATGTGTCGGCGCAACTACCTGAGATTACTCAAAATACTGTTGCGAGGTGCCTTGGCATT CCATATCACAATGTCCGTATCATCACGAGAAGAGTTGGAGGAGGTTTTGGTGGAAAGGCA ATGAAAGCAATACATGTTGCCGCTGCATGTGCTGTCGCCGCATTCAAGCTGCGGCGTCCG GTTCGAATGTACCTCGATCGCAAGACAGACATGATCATGGCGGGAGGGCGGCATCCGATG AAGGTAAAGTACTCCGTCGGTTTCAAGTCCGACGGCAAGATCACGGGTCTGCACTTTGAT CTTGGAATGAACGGCGGAATATCGCCGGATTGCAGCCCGGTGTTGCCAGTCGCCATTGTC GGGGCTCTGAAGAAGTACAACTGGGGCGCTCTCTCCTTCGACATCAAGGTCTGCAAGACG AACGTCTCGTCGAAGTCGGCGATGCGGGCTCCCGGCGACGCGCAGGGCTCGTTCATCGCC GAGGCCATCGTCGAACACATCGCGTCCACTCTCTCAGTGGACACGAACGCCATCAGGAGG AAGAACCTCCACGACTTCGAGAGCCTCAAGGTGTTTTATGGGAATAGCGCCGGTGATCCT TCGACGTACAGTCTCGTCACCATCTTCGACAAGCTGGCCTCGTCGCCGGAGTACCAGCAG AGGGCCGCCATGGTCGAGCACTTCAACGCCGGCAACAGGTGGAAGAAGCGGGGCATTTCT TGCGTGCCGATCACCTACGACGTGAGGCTCCGGCCAACTCCGGGGAAGGTGTCCATCATG AACGACGGCTCCATCGCCGTTGAGGTCGGCGGCGTCGAGATCGGGCAGGGGCTGTGGACG AAAGTGAAGCAGATGACAGCGTTCGCGCTGGGCCAGCTCTGCGATGATGGCGGCGAGGGC CTCATCGACAAGGTCCGTGTCATCCAGGCCGACACCCTGAGCATGATCCAGGGAGGCTTC ACCGGTGGGAGCACGACCTCCGAGACTAGCTGCGAGGCTGTTCGGAAGTCGTGCGCCGCC CTCGTGGAGAGGTTGAAGCCCATCAAAGAGAAGGCTGGCACGCCACCATGGAAATCCCTT ATTGCCCAGGCAAGCATGGCGAGTGTGAAGCTGACAGAGCACGCGTACTGGACGCCTGAC CCCACGTTCACTAGCTACTTGAACTATGGAGCTGCAATTAGTGAGGTGGAAGTCGATGTG CTGACGGGAGAAACCACCATCCTGAGGAGCGACCTCGTGTACGACTGTGGGCAGAGCCTG AATCCTGCTGTGGACTTGGGCCAGGTGGAAGGCGCATTCGTGCAAGGGATCGGCTTCTTC ACGAACGAGGAGTACACGACCAACTCCGATGGGCTGGTCATCAACGACGGCACGTGGACG TACAAGATCCCCACCGTGGACACCATCCCCAAGCAGTTCAACGTCGAGCTCATCAACAGC GCCCGCGATCACAAGCGCGTCCTCTCCTCCAAAGCGTCCGGTGAGCCGCCGCTGCTGCTG GCGTCGTCGGTGCACTGCGCGATGAGGGAGGCGATCAGGGCGGCCAGGAAGGAGTTCGCC GGCGCCGGAGGCTCGCCGCTGACGTTCCAGATGGACGTGCCGGCGACGATGCCGATCGTC AAGGAGCTCTGCGGCCTTGACGTCGTGGAGAGATATCTCGAGAGCTTTGCTGCCAAAGCC TAGAGATAGAAGGGTTCTTTGGCTTAGCTTTGTATAAACACCAACAATAATCTGCGCCTG GATTTGTGTTGATGTGGTATATATGTACAGAACAAAAGGTGTTTTTTTGGGAAAAATAAA ATCATATGGATGGTATTGTTCTATC