Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0789200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:32800595:32802990:-1 gene:Os03g0789200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF593 family protein. (Os03t0789200-01)
Sequence

ATGGATCCAATCGGCGACCCATCGCCGTCGTCCCGGCGGTCGGTGAAGCGGCGGCCTCCC
GCGCGATCGCCGGAGCTGTCGCCGAAGGCGTGGGGAGGGGAGGCGCCGGAGCTGATCCGG
CGGCTGGAGGAGCTGGAGGAGGCGGCGGCGCGGCTGCGGGGCGAGAAGGAGGCCGCGGAG
GAGGCGGCGCGGGAGCTGCAGGCCGAGTTGGATGCGGAGCGGGCGTCGGCGGAGACGGCG
ACCAGCGAGGCCATGCTCATGATCGAGCGGCTGCAGCGGGAGAAGGCGGCCGCGCAGATG
GAGGCCCGCCAGTTCCGGCGGTACGCCGAGGGCCGCGAGGATCGCGAGCGTGAGGTACAG
GAAGAGCTCGCCTCGCTCTCCGACCTCGCCGCCTCCTACCACTCCCGCCTCCAGTCCCAC
GGGATCGACCCTGATTCCTTCTCCGACGACGGCGAGGAGGAGCAGCACGACGAGGAAGAT
GGCGAAGAGGTAGAACAGATCGACACGGCCGCGCTACAGACAGATGGAAGCAGCGGCGGC
GACTCAATCGGTGGCATGCAGGTGAAAGCCATGGTCGACGATGATGAGGAAGAGCAATTC
ACCCCTGTGGAGAAGGAGTTCGAGTACACGGTGGATGTGAGGTGCGCGAGCTCGACGACG
AAGGTATCCGGGGCGGTGGTTGTTGGGGAGTTCATGGGGGAGGGCAATGCAGCTGCAGGG
GGATTGTACGCCAGGGTGGAGGCTCTGGAGGCGGACAGGGCGGCAATGCGGAGGGAAATC
GCAGCATTGCGAGCAGAGAGAGCTCAGCTGGTGATGGCGAGGGCGATGGCGCGGCGGCTG
TGCCGGGAGGTGGTTGCTGAACAGAAAGCCAAGAAAGTGGCTGCCTCACCACGAAGCTTC
TCGGTGCTAGGGGTTTGCAAGTGGGTGCTCTCGATAATCTTTTGGAGAAACAGAAGTTCC
ACAGCCAGGTATACCTTCGGTCTGTCAACTACGTTCCTTGGCTTCCTACTGCTGCTCGAC
AGATCCACCATGTTGAGTCCCTGGCGTCGTCTGCCTAGCCCACGGCAATGA

Peptide Sequence

PEP ID

Os03t0789200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:32800595:32802990:-1 gene:Os03g0789200 transcript:Os03t0789200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF593 family protein. (Os03t0789200-01)
Sequence

MDPIGDPSPSSRRSVKRRPPARSPELSPKAWGGEAPELIRRLEELEEAAARLRGEKEAAE
EAARELQAELDAERASAETATSEAMLMIERLQREKAAAQMEARQFRRYAEGREDREREVQ
EELASLSDLAASYHSRLQSHGIDPDSFSDDGEEEQHDEEDGEEVEQIDTAALQTDGSSGG
DSIGGMQVKAMVDDDEEEQFTPVEKEFEYTVDVRCASSTTKVSGAVVVGEFMGEGNAAAG
GLYARVEALEADRAAMRREIAALRAERAQLVMARAMARRLCREVVAEQKAKKVAASPRSF
SVLGVCKWVLSIIFWRNRSSTARYTFGLSTTFLGFLLLLDRSTMLSPWRRLPSPRQ

Transcript Sequence

Transcript ID

Os03t0789200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32800595:32802990:-1 gene:Os03g0789200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF593 family protein. (Os03t0789200-01)
Sequence

AGACGCCACTGCCTTTCCCCTTCCGAGCAGCAGCGGCCGCTTCGCTTCGCTTCGTTTGCT
TCGTTCGCCGGCGGCAGCGGCGGTGGCGGCGGCGGCGGTGAGGGTGGGGTTGGGGATTGG
GGGATCGAACCTCGCTGGATATATAGATGCCTCCATGGATCCAATCGGCGACCCATCGCC
GTCGTCCCGGCGGTCGGTGAAGCGGCGGCCTCCCGCGCGATCGCCGGAGCTGTCGCCGAA
GGCGTGGGGAGGGGAGGCGCCGGAGCTGATCCGGCGGCTGGAGGAGCTGGAGGAGGCGGC
GGCGCGGCTGCGGGGCGAGAAGGAGGCCGCGGAGGAGGCGGCGCGGGAGCTGCAGGCCGA
GTTGGATGCGGAGCGGGCGTCGGCGGAGACGGCGACCAGCGAGGCCATGCTCATGATCGA
GCGGCTGCAGCGGGAGAAGGCGGCCGCGCAGATGGAGGCCCGCCAGTTCCGGCGGTACGC
CGAGGGCCGCGAGGATCGCGAGCGTGAGGTACAGGAAGAGCTCGCCTCGCTCTCCGACCT
CGCCGCCTCCTACCACTCCCGCCTCCAGTCCCACGGGATCGACCCTGATTCCTTCTCCGA
CGACGGCGAGGAGGAGCAGCACGACGAGGAAGATGGCGAAGAGGTAGAACAGATCGACAC
GGCCGCGCTACAGACAGATGGAAGCAGCGGCGGCGACTCAATCGGTGGCATGCAGGTGAA
AGCCATGGTCGACGATGATGAGGAAGAGCAATTCACCCCTGTGGAGAAGGAGTTCGAGTA
CACGGTGGATGTGAGGTGCGCGAGCTCGACGACGAAGGTATCCGGGGCGGTGGTTGTTGG
GGAGTTCATGGGGGAGGGCAATGCAGCTGCAGGGGGATTGTACGCCAGGGTGGAGGCTCT
GGAGGCGGACAGGGCGGCAATGCGGAGGGAAATCGCAGCATTGCGAGCAGAGAGAGCTCA
GCTGGTGATGGCGAGGGCGATGGCGCGGCGGCTGTGCCGGGAGGTGGTTGCTGAACAGAA
AGCCAAGAAAGTGGCTGCCTCACCACGAAGCTTCTCGGTGCTAGGGGTTTGCAAGTGGGT
GCTCTCGATAATCTTTTGGAGAAACAGAAGTTCCACAGCCAGGTATACCTTCGGTCTGTC
AACTACGTTCCTTGGCTTCCTACTGCTGCTCGACAGATCCACCATGTTGAGTCCCTGGCG
TCGTCTGCCTAGCCCACGGCAATGAAACGACCTTCCCGGGCATATTGTCTATAAATCAGA
ACCTGGAATCATTGTTTACAGCTTCATTGTAAGTGTGTGTATTGCATTCTTTGACATGTT
CTTCCTCTTCTTTTTTTTTTCTTTTTTGCCCAAGCACAGTTTTTGAGCTGTATGTTTTTA
TTTGGAAGCTTTGAGCTTGTCTTATAGTGTGTTTATTCAAACCTAGGCGTGAATAGCTTG
TAATCAGGAGCTAACTGACATGCTCTGTGTAGAGTGTACATCATAGTAAGCTATGGAATC
TGATCTTGTTTGCGCGGTTGCCG