Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0788000-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:32732162:32733002:-1 gene:Os03g0788000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0116M22.8 protein. (Os03t0788000-00)
Sequence

ATGTCAACGGCGGCGCTGGTGGCGCGGCTCGCCCGCGACGTATCGGCCGCGCGAGACGCC
GCCCGCTTGGCCGCGGCCGCCGCATCCCGCGCCGCGCGCTCCTCGGCGGTCGCGTCGTCC
AGTCCTTGCGCACGCTCGGCGGCCGTCGTCGCAGCACGTCGCGCGGCACGCTCAGCCGCC
GCCGCCGCATCTCGCGCCGCGCGCGCGGTGTCACGCATCCCGTCTTATAACCTCGACGAC
TACAGCGACTACGAGCCAACTCCTGCTCCTCCCAGCCCATTGCCATCATATGGTCCTGAG
CCAGCTGACGATGAGACGGACAAGGATTTTGAGACTGATCTAGTTGACAGTGTGACGGAC
AAGGATTTTGAATCTGATGAAGCCATTTGGGCCTTCTATGAGCGCTGGTGCAAGGCTTAC
GATAAGGAGCGTGACCATGCTGAGATGGCTCACCGGTTCAAGATATTCAAGGAAACTGCA
GAGCTTGTTCATAGATCCAACAAGGATGCTCCAGAAGAAGAGAAACTATGTTTTGGCCCA
TACTGCGATGGGTTCGATGAGCAACAGAGGGCTGAATTTCTGCTTAAGTTTGGCCATTTT
CACGGGATTCACGAATTTGTAGAGCAGTGGAAGATCGACTTCCCAAAGCCGCGGAAGATT
GACTCCCCAAATCAATCCCCATGA

Peptide Sequence

PEP ID

Os03t0788000-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:32732162:32733002:-1 gene:Os03g0788000 transcript:Os03t0788000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0116M22.8 protein. (Os03t0788000-00)
Sequence

MSTAALVARLARDVSAARDAARLAAAAASRAARSSAVASSSPCARSAAVVAARRAARSAA
AAASRAARAVSRIPSYNLDDYSDYEPTPAPPSPLPSYGPEPADDETDKDFETDLVDSVTD
KDFESDEAIWAFYERWCKAYDKERDHAEMAHRFKIFKETAELVHRSNKDAPEEEKLCFGP
YCDGFDEQQRAEFLLKFGHFHGIHEFVEQWKIDFPKPRKIDSPNQSP

Transcript Sequence

Transcript ID

Os03t0788000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32732162:32733002:-1 gene:Os03g0788000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0116M22.8 protein. (Os03t0788000-00)
Sequence

ATGTCAACGGCGGCGCTGGTGGCGCGGCTCGCCCGCGACGTATCGGCCGCGCGAGACGCC
GCCCGCTTGGCCGCGGCCGCCGCATCCCGCGCCGCGCGCTCCTCGGCGGTCGCGTCGTCC
AGTCCTTGCGCACGCTCGGCGGCCGTCGTCGCAGCACGTCGCGCGGCACGCTCAGCCGCC
GCCGCCGCATCTCGCGCCGCGCGCGCGGTGTCACGCATCCCGTCTTATAACCTCGACGAC
TACAGCGACTACGAGCCAACTCCTGCTCCTCCCAGCCCATTGCCATCATATGGTCCTGAG
CCAGCTGACGATGAGACGGACAAGGATTTTGAGACTGATCTAGTTGACAGTGTGACGGAC
AAGGATTTTGAATCTGATGAAGCCATTTGGGCCTTCTATGAGCGCTGGTGCAAGGCTTAC
GATAAGGAGCGTGACCATGCTGAGATGGCTCACCGGTTCAAGATATTCAAGGAAACTGCA
GAGCTTGTTCATAGATCCAACAAGGATGCTCCAGAAGAAGAGAAACTATGTTTTGGCCCA
TACTGCGATGGGTTCGATGAGCAACAGAGGGCTGAATTTCTGCTTAAGTTTGGCCATTTT
CACGGGATTCACGAATTTGTAGAGCAGTGGAAGATCGACTTCCCAAAGCCGCGGAAGATT
GACTCCCCAAATCAATCCCCATGA