Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0786900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:32679834:32691068:1 gene:Os03g0786900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os03t0786900-01)
Sequence	GAGATCACCCCGGTGGTGATGGTGCTCACCACCCCGCTCGCCGAGGCCGCCTGCCGCAAG AGCGGCCTCAGCGTCGTCGACATGCTCTCGCCGTTCTCCCTCTTCAAAAAAATCGACGTG CCCGTGCGGACGGCGAGTGACCAGCCTTACAGGCTGCAGATGTTTAAGATTCGGATGGTC TACGCTTCCGACGTCCGGAAGCAGGACTACGAGGTGGCGGATCAGAGGATCAAGCCAGTA GTTTCTGAGGCCAATGAGAGTGCTCTTCCAGATCTGCTTTCAGACCCACCACAGCTAGAA GATGTACTTAGCAAGCCTGAAGCTGAACTGTGCCCTTTGTGGATTAAGAAATTCAACAGA GCTCTGATGCGTACACTCTCATTTTCAGAGCATGAAACATTCGACCACCCTGTGGCATGT CTGTTAGTTGTATCATCAAAGGACAATGAACCAATCAGCAAGTTTGTTGATCTCTTCAAC ACAAATCAGTTACCTTCTCTTTTAAATGAAGGCATAATGGATCCCCAGATTCTTAAGCAC TATCTTATACTTCATGATCAACAAGATGGACCACAAGAGATAGCTATGAACATTTTAGCG GAAATGAAGAGCACTCTTGGTTTGAATGATTGTAAATTGTTGTGTATTAATTCTTCTACA GAAGCAGATGGTGCAGATGCTGAGAATTCATGGTTACCTTATAAATCTCATGGTTTGCAC AACCAAGACGGAGCTTGTTGGCTTAACACGGATGATTTGAATGAGATAAAGGACTTCATG CAAGATTTGGCTTCTAATCATATAATTCCCTACATGGAGCAAAAGATCCGTGTCCTCAAT CAGCAGGTAGCCACAACAAGGAAGGGCTTTAGGAATCAAATAAAGAACTTGTGGTGGAGA AAAAGAGATGATGTTCCAGAAGCTGCAAATGGCCCAATGTATACGTTCACCTCCATAGAG TCACAGATTAGAGTTCTAGGTGACTATGCTTTCATGTTACGGGACTATGAGCTTGCTTTG TCCAATTATAGATTACTCTCAACAGATTATAAGCTTGACAAAGCTTGGAAGCGCTTTGCT GGTGTGCAGGAAATGAGTGGACTGTGCTATTTCATGTTGGACCAGTCAAGGAAGGATGCT GAATATTGCCTGGACAGTGCCTTTAGTACATATCTGAGAATTGGATCTTCTGGGAAGAGA AATGCTACTAGATGTGGCATTTGGTGGGCAGAAATGCTTAAAACAAGAGGACAGTATAGG GAGGCATCAAGTGTATACTACCGCGTTTCTAATGAGGAACCTTCATTGCATTCTGCTGTA CTGCTTGAGCAAGCCGCTTGTTGCTATGTGTTATCTAAACCACCTATGCTTCGGAAGTAT GGATTTCACCTAGTGTTAGCTGGAAATAGTTATTACATATCCGATCAGAAGCAACATGCT GTTCGGGCATACAGAAATGCTCTGTTTGTTTACAAACAACATCCTTGGAGTTATATCAAT GATCATGTACATTTTAATGTTGGAAGGTGGTATGGAGTCCTTGGGATATTTGATGTAGCC ATAAAGCACTTGCTGGAGGTCATTGCTTGCAGCCATCAGTCCCTGACAACGCAAAGCATG TTCCTCAATGATTTTTTCCATTTTGTTCAGAGTATGGGGAAGAAATTTGATGTCTACAAG CTTCAACTTCCTGTTATCAACATGCCATCACTCAGAGTTATATATGAAGATCATCGTACT TATGCATCAGATGCAGATGTTAATGTTAGTGAAAGCATTTGGCAGGAGCTGGAGGAAGAA ATGATCCCATCATCATCTATTGTTAGAACTAACTGGCTTGAAAAATCTCCTGACTTGAGA AAATACAAGGATTCCTGTGTTTGTGTTGTGGGAGAAGCAGTAAAAGTGAGGATTGAGCTT AGGAATCCTCTACAAATTCCTGTTGTTGTTTCTTGCATCTCTCTAATATGTCAGCTTTCC ACCAGTTTGGATGCTTCAAGTGCTGTCAATAGTGTGCTGACCACAGGTGCTGGGGAAGAT ATAGCTAACACAAAGCCTGCGATATCAACATTTGAGGATGATGGAAATAATTTCACAGTT TCAAAGCTGGACATTGTGTTAGGAGGAAGTGAAACTAAAAGTGTACAACTTGAAGTTACT CCAAAAGTTGAAGGTATTCTGAAGTTACATGGGATAAGGTGGACGCTCTCAGATTTATTA GTTGGCTATCAATACTTTGAATTTGACACAAAAAGGAAAACTAAGAAAGGGAAAAAGGGA CCTCGTCGTACTTTGAGCAACACCCTGATTGTAATCAAGGGTTTACCTAAACTTACGGGG TGTATTGATCACTTGCCAACAAATGCGTTTGCTGGAGATTTACGGCTACTCAAGCTGAAT CTGAGGAACCAGTCAGAATATGCTGTGAAGAATATTAAGATGAAGCTTAGCCATCCAAGA TTTGTAATTCCTGGTGATTTATCAGAAGTTGATTTCGAGTTTCCCCAATGCTTAAGAAAG CATGTACAATCAGAAATTAGTACTGTATCGACAAAACGTACTCAGGGAGATGCCAAGGGT TTGCTCTTTACATTTTCTCAAGATATTAAAATTCAAGAAGGAGCCACGTTCTCCTGGCCT ATTTGGTTCCATGCTGCAACTCCTGGGAACTTTTCTCTTTATATATCTCTGTATTATGAA ATGGAGAGCCCAAGTGAGATAACTTATAGAACATTGCGCATGCACTACAATATTGAGGTT TTTCCATCACTTAATGTGTCCTTTGCTATAAGAATGTGCTCATCAAGATTGAAAGAGTAT ATTGTGCGCATGGACATCCTGAACAGGACTCCCTCAGAGTCATTTATTCTTCATCAGTTG TCATGCAATGACAGTAAATGGGCAATTTCATCGTTGCCTTTGTGCGATTCTATCCGCTCT ATTGAAACAGTATCAGCAAATCAGTCTGTGTCGTGCTTCTTCAAGATAAAGGATTTAGGT ACAAATTCTTGTAAAGAAGCTGAAAACAGTTCTTGTAGAAGTGATATGCTTTTTTTATCT CGTGAGGGCAACAGCAATACTGAGGAGTTTGATGTTTCCCAATCTCCTATTACCAATTTC CACTATCAAGAGAGATACCAACAGGGAAGGTTGGCTAAGGGACCACGGGACCTTCTTGAT TTTATTCTGATCTCGAAAGCAGTAGGTGGTAACTATTCCAAGTCAGATCCAGACGTTCAA CTACTCTCTCATCATGTGTGCCATTGCAGTGCTATCGACCAGAGTCCTATATGGTGGTTT ATGGAAGGGCCTAGAACAGTTACTCATGATTTCTCAAAGTCTTACTGTGAAGCAAACATC CAGTTGGTAATTCATAATACTGTGCAACATAATATTTCAGCGAGAGTAGTTACCTATGAC AGCGTGCCAGATAAAAGCCAAACTGTCAATTTGCAAGATTCTAATAGTAATCAGGGTGGA TGGTATGATGTATCGCTGGAAAATGACATTAAAGCTATCTCTACTGCCAAGGGGACACAT TATCAGAAACAGCCATCAGAGAGCATTTCACCTTTTGTTTGGTGTTCATTGAGTTCTGCT CAAGTTGACCTGAAACCTGACACTTCCACTAAAGTTCCTCTAAAAGTGTGCATATTTATG CCTGGAACATACAATCTTTCGAATTATCAGCTACAATGGAAAGTGCATTCATCCGAGGTA GGACAGGTGGATGAAAATCAAAGATCCGGTGGTGGCCAAGGGCATCCTTTTTATGTCACT GTTCTTCAGGATGCTTGA

Peptide Sequence

PEP ID	Os03t0786900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:32679834:32691068:1 gene:Os03g0786900 transcript:Os03t0786900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os03t0786900-01)
Sequence	EITPVVMVLTTPLAEAACRKSGLSVVDMLSPFSLFKKIDVPVRTASDQPYRLQMFKIRMV YASDVRKQDYEVADQRIKPVVSEANESALPDLLSDPPQLEDVLSKPEAELCPLWIKKFNR ALMRTLSFSEHETFDHPVACLLVVSSKDNEPISKFVDLFNTNQLPSLLNEGIMDPQILKH YLILHDQQDGPQEIAMNILAEMKSTLGLNDCKLLCINSSTEADGADAENSWLPYKSHGLH NQDGACWLNTDDLNEIKDFMQDLASNHIIPYMEQKIRVLNQQVATTRKGFRNQIKNLWWR KRDDVPEAANGPMYTFTSIESQIRVLGDYAFMLRDYELALSNYRLLSTDYKLDKAWKRFA GVQEMSGLCYFMLDQSRKDAEYCLDSAFSTYLRIGSSGKRNATRCGIWWAEMLKTRGQYR EASSVYYRVSNEEPSLHSAVLLEQAACCYVLSKPPMLRKYGFHLVLAGNSYYISDQKQHA VRAYRNALFVYKQHPWSYINDHVHFNVGRWYGVLGIFDVAIKHLLEVIACSHQSLTTQSM FLNDFFHFVQSMGKKFDVYKLQLPVINMPSLRVIYEDHRTYASDADVNVSESIWQELEEE MIPSSSIVRTNWLEKSPDLRKYKDSCVCVVGEAVKVRIELRNPLQIPVVVSCISLICQLS TSLDASSAVNSVLTTGAGEDIANTKPAISTFEDDGNNFTVSKLDIVLGGSETKSVQLEVT PKVEGILKLHGIRWTLSDLLVGYQYFEFDTKRKTKKGKKGPRRTLSNTLIVIKGLPKLTG CIDHLPTNAFAGDLRLLKLNLRNQSEYAVKNIKMKLSHPRFVIPGDLSEVDFEFPQCLRK HVQSEISTVSTKRTQGDAKGLLFTFSQDIKIQEGATFSWPIWFHAATPGNFSLYISLYYE MESPSEITYRTLRMHYNIEVFPSLNVSFAIRMCSSRLKEYIVRMDILNRTPSESFILHQL SCNDSKWAISSLPLCDSIRSIETVSANQSVSCFFKIKDLGTNSCKEAENSSCRSDMLFLS REGNSNTEEFDVSQSPITNFHYQERYQQGRLAKGPRDLLDFILISKAVGGNYSKSDPDVQ LLSHHVCHCSAIDQSPIWWFMEGPRTVTHDFSKSYCEANIQLVIHNTVQHNISARVVTYD SVPDKSQTVNLQDSNSNQGGWYDVSLENDIKAISTAKGTHYQKQPSESISPFVWCSLSSA QVDLKPDTSTKVPLKVCIFMPGTYNLSNYQLQWKVHSSEVGQVDENQRSGGGQGHPFYVT VLQDA

Transcript Sequence

Transcript ID	Os03t0786900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:32679834:32691068:1 gene:Os03g0786900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os03t0786900-01)
Sequence	GAGATCACCCCGGTGGTGATGGTGCTCACCACCCCGCTCGCCGAGGCCGCCTGCCGCAAG AGCGGCCTCAGCGTCGTCGACATGCTCTCGCCGTTCTCCCTCTTCAAAAAAATCGACGTG CCCGTGCGGACGGCGAGTGACCAGCCTTACAGGCTGCAGATGTTTAAGATTCGGATGGTC TACGCTTCCGACGTCCGGAAGCAGGACTACGAGGTGGCGGATCAGAGGATCAAGCCAGTA GTTTCTGAGGCCAATGAGAGTGCTCTTCCAGATCTGCTTTCAGACCCACCACAGCTAGAA GATGTACTTAGCAAGCCTGAAGCTGAACTGTGCCCTTTGTGGATTAAGAAATTCAACAGA GCTCTGATGCGTACACTCTCATTTTCAGAGCATGAAACATTCGACCACCCTGTGGCATGT CTGTTAGTTGTATCATCAAAGGACAATGAACCAATCAGCAAGTTTGTTGATCTCTTCAAC ACAAATCAGTTACCTTCTCTTTTAAATGAAGGCATAATGGATCCCCAGATTCTTAAGCAC TATCTTATACTTCATGATCAACAAGATGGACCACAAGAGATAGCTATGAACATTTTAGCG GAAATGAAGAGCACTCTTGGTTTGAATGATTGTAAATTGTTGTGTATTAATTCTTCTACA GAAGCAGATGGTGCAGATGCTGAGAATTCATGGTTACCTTATAAATCTCATGGTTTGCAC AACCAAGACGGAGCTTGTTGGCTTAACACGGATGATTTGAATGAGATAAAGGACTTCATG CAAGATTTGGCTTCTAATCATATAATTCCCTACATGGAGCAAAAGATCCGTGTCCTCAAT CAGCAGGTAGCCACAACAAGGAAGGGCTTTAGGAATCAAATAAAGAACTTGTGGTGGAGA AAAAGAGATGATGTTCCAGAAGCTGCAAATGGCCCAATGTATACGTTCACCTCCATAGAG TCACAGATTAGAGTTCTAGGTGACTATGCTTTCATGTTACGGGACTATGAGCTTGCTTTG TCCAATTATAGATTACTCTCAACAGATTATAAGCTTGACAAAGCTTGGAAGCGCTTTGCT GGTGTGCAGGAAATGAGTGGACTGTGCTATTTCATGTTGGACCAGTCAAGGAAGGATGCT GAATATTGCCTGGACAGTGCCTTTAGTACATATCTGAGAATTGGATCTTCTGGGAAGAGA AATGCTACTAGATGTGGCATTTGGTGGGCAGAAATGCTTAAAACAAGAGGACAGTATAGG GAGGCATCAAGTGTATACTACCGCGTTTCTAATGAGGAACCTTCATTGCATTCTGCTGTA CTGCTTGAGCAAGCCGCTTGTTGCTATGTGTTATCTAAACCACCTATGCTTCGGAAGTAT GGATTTCACCTAGTGTTAGCTGGAAATAGTTATTACATATCCGATCAGAAGCAACATGCT GTTCGGGCATACAGAAATGCTCTGTTTGTTTACAAACAACATCCTTGGAGTTATATCAAT GATCATGTACATTTTAATGTTGGAAGGTGGTATGGAGTCCTTGGGATATTTGATGTAGCC ATAAAGCACTTGCTGGAGGTCATTGCTTGCAGCCATCAGTCCCTGACAACGCAAAGCATG TTCCTCAATGATTTTTTCCATTTTGTTCAGAGTATGGGGAAGAAATTTGATGTCTACAAG CTTCAACTTCCTGTTATCAACATGCCATCACTCAGAGTTATATATGAAGATCATCGTACT TATGCATCAGATGCAGATGTTAATGTTAGTGAAAGCATTTGGCAGGAGCTGGAGGAAGAA ATGATCCCATCATCATCTATTGTTAGAACTAACTGGCTTGAAAAATCTCCTGACTTGAGA AAATACAAGGATTCCTGTGTTTGTGTTGTGGGAGAAGCAGTAAAAGTGAGGATTGAGCTT AGGAATCCTCTACAAATTCCTGTTGTTGTTTCTTGCATCTCTCTAATATGTCAGCTTTCC ACCAGTTTGGATGCTTCAAGTGCTGTCAATAGTGTGCTGACCACAGGTGCTGGGGAAGAT ATAGCTAACACAAAGCCTGCGATATCAACATTTGAGGATGATGGAAATAATTTCACAGTT TCAAAGCTGGACATTGTGTTAGGAGGAAGTGAAACTAAAAGTGTACAACTTGAAGTTACT CCAAAAGTTGAAGGTATTCTGAAGTTACATGGGATAAGGTGGACGCTCTCAGATTTATTA GTTGGCTATCAATACTTTGAATTTGACACAAAAAGGAAAACTAAGAAAGGGAAAAAGGGA CCTCGTCGTACTTTGAGCAACACCCTGATTGTAATCAAGGGTTTACCTAAACTTACGGGG TGTATTGATCACTTGCCAACAAATGCGTTTGCTGGAGATTTACGGCTACTCAAGCTGAAT CTGAGGAACCAGTCAGAATATGCTGTGAAGAATATTAAGATGAAGCTTAGCCATCCAAGA TTTGTAATTCCTGGTGATTTATCAGAAGTTGATTTCGAGTTTCCCCAATGCTTAAGAAAG CATGTACAATCAGAAATTAGTACTGTATCGACAAAACGTACTCAGGGAGATGCCAAGGGT TTGCTCTTTACATTTTCTCAAGATATTAAAATTCAAGAAGGAGCCACGTTCTCCTGGCCT ATTTGGTTCCATGCTGCAACTCCTGGGAACTTTTCTCTTTATATATCTCTGTATTATGAA ATGGAGAGCCCAAGTGAGATAACTTATAGAACATTGCGCATGCACTACAATATTGAGGTT TTTCCATCACTTAATGTGTCCTTTGCTATAAGAATGTGCTCATCAAGATTGAAAGAGTAT ATTGTGCGCATGGACATCCTGAACAGGACTCCCTCAGAGTCATTTATTCTTCATCAGTTG TCATGCAATGACAGTAAATGGGCAATTTCATCGTTGCCTTTGTGCGATTCTATCCGCTCT ATTGAAACAGTATCAGCAAATCAGTCTGTGTCGTGCTTCTTCAAGATAAAGGATTTAGGT ACAAATTCTTGTAAAGAAGCTGAAAACAGTTCTTGTAGAAGTGATATGCTTTTTTTATCT CGTGAGGGCAACAGCAATACTGAGGAGTTTGATGTTTCCCAATCTCCTATTACCAATTTC CACTATCAAGAGAGATACCAACAGGGAAGGTTGGCTAAGGGACCACGGGACCTTCTTGAT TTTATTCTGATCTCGAAAGCAGTAGGTGGTAACTATTCCAAGTCAGATCCAGACGTTCAA CTACTCTCTCATCATGTGTGCCATTGCAGTGCTATCGACCAGAGTCCTATATGGTGGTTT ATGGAAGGGCCTAGAACAGTTACTCATGATTTCTCAAAGTCTTACTGTGAAGCAAACATC CAGTTGGTAATTCATAATACTGTGCAACATAATATTTCAGCGAGAGTAGTTACCTATGAC AGCGTGCCAGATAAAAGCCAAACTGTCAATTTGCAAGATTCTAATAGTAATCAGGGTGGA TGGTATGATGTATCGCTGGAAAATGACATTAAAGCTATCTCTACTGCCAAGGGGACACAT TATCAGAAACAGCCATCAGAGAGCATTTCACCTTTTGTTTGGTGTTCATTGAGTTCTGCT CAAGTTGACCTGAAACCTGACACTTCCACTAAAGTTCCTCTAAAAGTGTGCATATTTATG CCTGGAACATACAATCTTTCGAATTATCAGCTACAATGGAAAGTGCATTCATCCGAGGTA GGACAGGTGGATGAAAATCAAAGATCCGGTGGTGGCCAAGGGCATCCTTTTTATGTCACT GTTCTTCAGGATGCTTGATGAACTGCAAGGAAGGATGGTGTGAGACAGTGAGACAACCTT CTCATGAAGAAACTCGTTCCTTGGATGCTGGGTAAAGATATACAATCTGACCAACCCAAA CCAGTGGAGTGGTGACTGGTGAAGATGTGTACCTGTAAGTTCACGGTTGAGTATAGAATG AATATACATGGATTCCAGTTTCAATACTAGCACAGTTATACAAGTTCTTTTCAAGGGTAA TTCTGGCGATTAGATGTATACCATTGTCGGTGAAATTTTGGTGCTAGGAAGGATGCAGAC AACAAAAGCTTTGGTTTGCCGATTGTTGCTGTAGCCTATAGGTTCTTACATTGTTCTTGT AAATCCTTGTCAACTTTGAGACAACTCGCAGATGCAGTATCTGTCCATAGTTTTCAGTCA TATTGTACTTTTGAGGAAATTAGATACTTGAGACGCTCCAAGGGCGGCAGTTTTGCCTGG CTAATTGTGATGTTCATCATATAGTGTTGCTTTGAATCCCAGATCATACGAAGTTATTTT ATTTCCATTGGCTTAGTTTGTTTGCCGGATTATCTTGTGATGTTTTTATAAGATTCTATA TAATAGAAAATGATTTGCGGTTGTCTTGTTTG