Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0785300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:32591747:32599028:-1 gene:Os03g0785300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C3HC-like domain containing protein. (Os03t0785300-01);Nuclear-interacting partner of ALK/Rsm1-like domain containing protein. (Os03t0785300-02)
Sequence	ATGCGGGAGGAGGTGAGGAGCTCGTCGGGGGCGGCGGCCGAGCCGCCTCCTACGCCGGTT GCAAGTTCTGCAGGACCCTCGTCACCTGCTATGCAAGCTAATGTTGCCAGCATAGATTGG TCGGGTAGCAGACAAGCTTCCAGAGTTGATTCCTCATCACATGTTGCTCCGCATGCCCAT CAGCCTTCTCATAGTTTCGATGCCACTGGAACTGCTTTGGATTCTGCACCGTCATGTAGG CCATGGGAACGCGGAGACTTACTTCGTCGACTGGCAACATATAAGCCTACAACTTGGGCT TCTAGGCCTAAGGCTGCTAGTTCTTTGGCTTGTGCTCGGAGAGGTTGGGTTAACGTTGAC ATGGACAAAATTGAATGCGAGTCATGTGGTGCACATCTCATATTCAGTACATTGACATCC TGGTCTCCAGCTGAAGTTTCAAATGCTGGAGAAGCCTTTGCCGAGCAGCTTGATGCATCA CACCATAATAGCTGTCCCTGGAGAGGCAATAGCTGTGCTGACAGCTTGGTGCAGCTCCAC CTAACACAATCAGCCCTTATTGGGGGTTTTAAAGATCGATGTGATGGACTTCTGCAGTTT ACTTCCCTTCCAGTGATTGCTTCATCAGCAATTGAGCACATGAGGCTGACCAGGAGTTCC CAGATTGACCGCTTATTATCCCAATCAATTACCTTTTTATCTGGAGAGCTTAGTTACAAA GCAGAGAGCACAACAGGAATTGATATCCAGCAAGATTCCTCTTGTAGCTACTCAAAAGCT AGGAAGCTTATAAGCCTTTGTGGATGGGAGCCTAGGTGGCTTCCAAATGTTCAAGACTGT GAAGAAAATTCAACCCACTCAGCTAAAAATGCAGATTCGGTGGAACCATTTTTTCCCCGT TTTGCTGAACATCAAAAAAATTCATTCTCTGGGTCAGCCAAAAAAGATAAAGGAAAAGGC AAAAGGCCACTCAAAGACTCTGGATGTAGCATGAGATCACCTTTGTTAGATTGTAGCTTT TGTGGCTCTACAGTCAAGATCTGGGACTTTAGATCTGTGTCACGTCCTTGTCGTTTTAGT CCAAATAACATTGATGCACCTGAAACAGGCAAGAAGCTTGCTCTGACACGTGGAATTAGC GCTGCCAGTGGGATCAATGAATGGGTTACTGATGGGATGGAAAGAGATCCTGCTGAAGGG CGTGATGAAGAAGCAACAAATGAGGGTAAATCATTATCAAATGCTGGAGTGGACCTGAAT CTAACAATGGCTGGAGGATTACCATCAATTCAATCTTCTATACCAATTGCATCTGAGCGT TTCAACGGAGGATTGGGAAGAGATCTGATGATTGGACAACCTACTGGAAGTGAAGTTGGT GATCATGCAACTTCATACGAGTCCCGAGGTCCAAGCTCAAGGAAGCGCAACCATGAGGAA GGTGGGAGCACAGTTGACAAGCCACAGGACAGGCTTCAGCATGCTGATAGCATAGAAGGA AGTGTGATAGATCGTGATGGTGAGGAAGTTGATGATGCTGCGCAAGATTCGGACATCCCG AATAAAAGGTCACGTGGGTTTGATCTATTTGGTTCCTATCTTCCATCTTCTTCTGGAGCT GGTCCCAGTAGAAACTTTTGCTTTGATCCTGATGCGGATGCTGGTAAATTCAGTCATGCT AGAGCTGCAGGTCTAGCCGCTGTTGACAGAGATTCTATGAGGGAATCTTCTGTAGCTGCA ATGGATACTGTTCATAGTGCTGATGAAGACTCCATGGAGAGCGTTGAATACTATCCAGGT GATGGTAATGATATTGACATGCCCTCATCTAGTGCACACAGAAATATTGAAATGGATGAT GTCTTGGGCCTGAACTATAGTAACCAAGCACAGCAAAGTGCATGTGTACAGCCTGCTTCT GGAAGTGATGGAAGGGAAATAGGAGGAAGCAGTACAAATGAAGGGGAGGAAGTCCTTGAT GCAGTAACAGCCCCTGCTTTTGCAAGGGATCAACTTAGTGTAGGAATTAGCGGTGGTAGT GTTGGCATGGGTGCTAGCCATGAAGCTGAAATTCATGGAATTGATGTTTCTTTGCAAAGG GCTGAAAGTGTTGTAGGTGATGCAGAACCTAATACTGAGCTAACAGAGACGATGGGTCAT ACTGGTGAATCAGTTCCTGGACCTGGACTAATGGATGAGTTTGTACCTGACGAAGTTGAT CGGCAAGAACCTCATGGAGATAGCCAAGATATGGTGTCTCAGTCAGTCGGCCAAGCTGAC AGTGGCTCAAAAATTTATGGTTCCACTAAAGCTGATTCTGTTGAGAGTGGAGAAAAGATA GGAGGGCATGCTGTTGGTCATGCAAGCAGGATGCATCCTTCTCTTTCTTGCAATGCAGGG ATGCAGACCGGTTTGGATGTATCTAAAGAGGAAGTGACACAGGCTGGCAAACTATTGATC GCTGGTGATGTGCCAATGGGGTTAGATTATGACCCTCAGAATGGATTAGGAGCAACAAAT GGAGAAAATGATTTTGAATCAGGACTTCCAGAATTTGATCCTGTTAAGCATCACAACAGT TACTGCCCATGGGTAAATGGAACTGTGGCAGCAGCTTGCTGTAGCAACACTGAATCAAGC TCAAGTAGTTCACCACTTTCTGGCTGGCAATTAACAGTTGATGCACTTGACACATTCCAA TCTCTTGGTCAAGCTCAAAATCATGCTATGCGATCTGATTCCGCAGCCTCGTTATATATG GATGATCATGTAACTCCTAACCACAAGCTCGCCAGAAGGGCATCAGTGAGCAGAAGCCAT GGGAAATGCTGA

Peptide Sequence

PEP ID	Os03t0785300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:32591747:32599028:-1 gene:Os03g0785300 transcript:Os03t0785300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C3HC-like domain containing protein. (Os03t0785300-01);Nuclear-interacting partner of ALK/Rsm1-like domain containing protein. (Os03t0785300-02)
Sequence	MREEVRSSSGAAAEPPPTPVASSAGPSSPAMQANVASIDWSGSRQASRVDSSSHVAPHAH QPSHSFDATGTALDSAPSCRPWERGDLLRRLATYKPTTWASRPKAASSLACARRGWVNVD MDKIECESCGAHLIFSTLTSWSPAEVSNAGEAFAEQLDASHHNSCPWRGNSCADSLVQLH LTQSALIGGFKDRCDGLLQFTSLPVIASSAIEHMRLTRSSQIDRLLSQSITFLSGELSYK AESTTGIDIQQDSSCSYSKARKLISLCGWEPRWLPNVQDCEENSTHSAKNADSVEPFFPR FAEHQKNSFSGSAKKDKGKGKRPLKDSGCSMRSPLLDCSFCGSTVKIWDFRSVSRPCRFS PNNIDAPETGKKLALTRGISAASGINEWVTDGMERDPAEGRDEEATNEGKSLSNAGVDLN LTMAGGLPSIQSSIPIASERFNGGLGRDLMIGQPTGSEVGDHATSYESRGPSSRKRNHEE GGSTVDKPQDRLQHADSIEGSVIDRDGEEVDDAAQDSDIPNKRSRGFDLFGSYLPSSSGA GPSRNFCFDPDADAGKFSHARAAGLAAVDRDSMRESSVAAMDTVHSADEDSMESVEYYPG DGNDIDMPSSSAHRNIEMDDVLGLNYSNQAQQSACVQPASGSDGREIGGSSTNEGEEVLD AVTAPAFARDQLSVGISGGSVGMGASHEAEIHGIDVSLQRAESVVGDAEPNTELTETMGH TGESVPGPGLMDEFVPDEVDRQEPHGDSQDMVSQSVGQADSGSKIYGSTKADSVESGEKI GGHAVGHASRMHPSLSCNAGMQTGLDVSKEEVTQAGKLLIAGDVPMGLDYDPQNGLGATN GENDFESGLPEFDPVKHHNSYCPWVNGTVAAACCSNTESSSSSSPLSGWQLTVDALDTFQ SLGQAQNHAMRSDSAASLYMDDHVTPNHKLARRASVSRSHGKC

Transcript Sequence

Transcript ID	Os03t0785300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:32591747:32599028:-1 gene:Os03g0785300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C3HC-like domain containing protein. (Os03t0785300-01);Nuclear-interacting partner of ALK/Rsm1-like domain containing protein. (Os03t0785300-02)
Sequence	AATTACGCCGCGGCGAGGAGGAGAGGGGCGGCGACGCGGCGCGGCGAGGGGGAGAGGTGA GGAGAGGAGAGGGGAGGGGAGATGCGGGAGGAGGTGAGGAGCTCGTCGGGGGCGGCGGCC GAGCCGCCTCCTACGCCGGTTGCAAGTTCTGCAGGACCCTCGTCACCTGCTATGCAAGCT AATGTTGCCAGCATAGATTGGTCGGGTAGCAGACAAGCTTCCAGAGTTGATTCCTCATCA CATGTTGCTCCGCATGCCCATCAGCCTTCTCATAGTTTCGATGCCACTGGAACTGCTTTG GATTCTGCACCGTCATGTAGGCCATGGGAACGCGGAGACTTACTTCGTCGACTGGCAACA TATAAGCCTACAACTTGGGCTTCTAGGCCTAAGGCTGCTAGTTCTTTGGCTTGTGCTCGG AGAGGTTGGGTTAACGTTGACATGGACAAAATTGAATGCGAGTCATGTGGTGCACATCTC ATATTCAGTACATTGACATCCTGGTCTCCAGCTGAAGTTTCAAATGCTGGAGAAGCCTTT GCCGAGCAGCTTGATGCATCACACCATAATAGCTGTCCCTGGAGAGGCAATAGCTGTGCT GACAGCTTGGTGCAGCTCCACCTAACACAATCAGCCCTTATTGGGGGTTTTAAAGATCGA TGTGATGGACTTCTGCAGTTTACTTCCCTTCCAGTGATTGCTTCATCAGCAATTGAGCAC ATGAGGCTGACCAGGAGTTCCCAGATTGACCGCTTATTATCCCAATCAATTACCTTTTTA TCTGGAGAGCTTAGTTACAAAGCAGAGAGCACAACAGGAATTGATATCCAGCAAGATTCC TCTTGTAGCTACTCAAAAGCTAGGAAGCTTATAAGCCTTTGTGGATGGGAGCCTAGGTGG CTTCCAAATGTTCAAGACTGTGAAGAAAATTCAACCCACTCAGCTAAAAATGCAGATTCG GTGGAACCATTTTTTCCCCGTTTTGCTGAACATCAAAAAAATTCATTCTCTGGGTCAGCC AAAAAAGATAAAGGAAAAGGCAAAAGGCCACTCAAAGACTCTGGATGTAGCATGAGATCA CCTTTGTTAGATTGTAGCTTTTGTGGCTCTACAGTCAAGATCTGGGACTTTAGATCTGTG TCACGTCCTTGTCGTTTTAGTCCAAATAACATTGATGCACCTGAAACAGGCAAGAAGCTT GCTCTGACACGTGGAATTAGCGCTGCCAGTGGGATCAATGAATGGGTTACTGATGGGATG GAAAGAGATCCTGCTGAAGGGCGTGATGAAGAAGCAACAAATGAGGGTAAATCATTATCA AATGCTGGAGTGGACCTGAATCTAACAATGGCTGGAGGATTACCATCAATTCAATCTTCT ATACCAATTGCATCTGAGCGTTTCAACGGAGGATTGGGAAGAGATCTGATGATTGGACAA CCTACTGGAAGTGAAGTTGGTGATCATGCAACTTCATACGAGTCCCGAGGTCCAAGCTCA AGGAAGCGCAACCATGAGGAAGGTGGGAGCACAGTTGACAAGCCACAGGACAGGCTTCAG CATGCTGATAGCATAGAAGGAAGTGTGATAGATCGTGATGGTGAGGAAGTTGATGATGCT GCGCAAGATTCGGACATCCCGAATAAAAGGTCACGTGGGTTTGATCTATTTGGTTCCTAT CTTCCATCTTCTTCTGGAGCTGGTCCCAGTAGAAACTTTTGCTTTGATCCTGATGCGGAT GCTGGTAAATTCAGTCATGCTAGAGCTGCAGGTCTAGCCGCTGTTGACAGAGATTCTATG AGGGAATCTTCTGTAGCTGCAATGGATACTGTTCATAGTGCTGATGAAGACTCCATGGAG AGCGTTGAATACTATCCAGGTGATGGTAATGATATTGACATGCCCTCATCTAGTGCACAC AGAAATATTGAAATGGATGATGTCTTGGGCCTGAACTATAGTAACCAAGCACAGCAAAGT GCATGTGTACAGCCTGCTTCTGGAAGTGATGGAAGGGAAATAGGAGGAAGCAGTACAAAT GAAGGGGAGGAAGTCCTTGATGCAGTAACAGCCCCTGCTTTTGCAAGGGATCAACTTAGT GTAGGAATTAGCGGTGGTAGTGTTGGCATGGGTGCTAGCCATGAAGCTGAAATTCATGGA ATTGATGTTTCTTTGCAAAGGGCTGAAAGTGTTGTAGGTGATGCAGAACCTAATACTGAG CTAACAGAGACGATGGGTCATACTGGTGAATCAGTTCCTGGACCTGGACTAATGGATGAG TTTGTACCTGACGAAGTTGATCGGCAAGAACCTCATGGAGATAGCCAAGATATGGTGTCT CAGTCAGTCGGCCAAGCTGACAGTGGCTCAAAAATTTATGGTTCCACTAAAGCTGATTCT GTTGAGAGTGGAGAAAAGATAGGAGGGCATGCTGTTGGTCATGCAAGCAGGATGCATCCT TCTCTTTCTTGCAATGCAGGGATGCAGACCGGTTTGGATGTATCTAAAGAGGAAGTGACA CAGGCTGGCAAACTATTGATCGCTGGTGATGTGCCAATGGGGTTAGATTATGACCCTCAG AATGGATTAGGAGCAACAAATGGAGAAAATGATTTTGAATCAGGACTTCCAGAATTTGAT CCTGTTAAGCATCACAACAGTTACTGCCCATGGGTAAATGGAACTGTGGCAGCAGCTTGC TGTAGCAACACTGAATCAAGCTCAAGTAGTTCACCACTTTCTGGCTGGCAATTAACAGTT GATGCACTTGACACATTCCAATCTCTTGGTCAAGCTCAAAATCATGCTATGCGATCTGAT TCCGCAGCCTCGTTATATATGGATGATCATGTAACTCCTAACCACAAGCTCGCCAGAAGG GCATCAGTGAGCAGAAGCCATGGGAAATGCTGATTTGAGGCCCTTCCACGCATGCTAGCC TTTACTAATCACCCAAGTTTGCAGCAATACTATACCAGTAATTTCACAGCTTATCCGAAT CAAAAAGAAAAAAAAATAAAGACACAGCTTCTCAATCATAAGTAACATTCGCCAGAGATC CAATTTGGCACATCGAGGAGCGTATTTACATGTAATTCTTTCTGAATTATGTTGGGTTGG ACATCATCCCCAGTATGTTGCGCTGCCCATGATCAGACAGGATAAACCGGCTAATTAATA ATCCATGTTAGTTACACCGTGTGACCTATATAGTTGTTGCTCAGAAACCGGCAATTTGAT GTGGTGTCCAAACGATAATATCATAGTACTGTATTTATTCTGAAAGAGTCGATTCAATGA AGTTGTCCCCAGATTGACATGAAC