Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0783000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:32444133:32449496:1 gene:Os03g0783000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARP7 description:Similar to Actin-related protein 7. (Os03t0783000-01)
Sequence

ATGGAGGCGGTGGTCGTCGACGCGGGGTCGAAGCTGCTCAAGGCCGGCATCGCCTTGCCC
GACCAGTCCCCATCGCTGGTGATGCCGTCGAAGATGAAGTTGGAGGTAGAGGACGGTCAG
ATGGGCGACGGCGCGGTGGTGGAGGAGGTGGTGCAGCCGGTGGTGCGTGGCTTCGTCAAG
GACTGGGACGCCATGGAGGACCTGCTCAACTACGTCCTGTACAGCAACATTGGGTGGGAG
ATTGGGGATGAGGGCCAGATCCTCTTCACAGAGCCGCTCTTCACACCCAAGGCACTTCGG
GAGCAACTGGCGCAACTTATGTTCGAAAAATTCAATGTTTCAGGCTTTTATGACTCTGAG
CAGGCTGTATTGTCACTTTATGCAGTTGGACGCATTTCGGGCTGTACAGTGGACATTGGG
CATGGGAAAATCGATATTGCTCCAGTTTGTGAAGGTGCTGTTCAGCACATAGCATCAAAG
AGATTTGATATTGGAGGAACTGACTTGACAAACCTATTTGCGGAAGAACTCAAAAAATCT
AACTCATCGGTAAACATTGATATTTCTGATGTTGAGCGGCTGAAAGAGCAGTATGCATGC
TGTGCAGAAGATCAAATGGCCTTTGAAGCTATAGGAAGCTCATGCCGACCAGAAAGGCAC
ACACTTCCAGATGGGCAGGTTATAACAATTGAAAAAGAACGGTACATTGTTGGTGAAGCT
TTATTTCAACCCCACATTTTGGGCTTAGAAGATTATGGAATTGTTCATCAGCTGGTTACA
AGCGTCTCGAATGTCACACCAGAGTACCATCGTCAGCTGCTTGAAAACACTATGTTATGT
GGTGGCACTGCATCAATGACTGGTTTTGAAGACAGGTTCCAGAGAGAAGCAAATCTGTCT
GCTTCAGCAATCTGCCCATCTCTTGTAAAGCCTCCAGAATATATGCCCGAGAACCTAGCT
AGGTACTCGGCCTGGCTGGGCGGTGCAATATTGGCCAAGGTCGTTTTCCCGCAAAACCAG
CACGTCACCAAGGGAGACTACGACGAGACTGGTCCATCCATCGTTCACAAGAAGTGCTTC
TGA

Peptide Sequence

PEP ID

Os03t0783000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:32444133:32449496:1 gene:Os03g0783000 transcript:Os03t0783000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARP7 description:Similar to Actin-related protein 7. (Os03t0783000-01)
Sequence

MEAVVVDAGSKLLKAGIALPDQSPSLVMPSKMKLEVEDGQMGDGAVVEEVVQPVVRGFVK
DWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSE
QAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKS
NSSVNIDISDVERLKEQYACCAEDQMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEA
LFQPHILGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREANLS
ASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF

Transcript Sequence

Transcript ID

Os03t0783000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32444133:32449496:1 gene:Os03g0783000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARP7 description:Similar to Actin-related protein 7. (Os03t0783000-01)
Sequence

ACGCGCTTGTCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCGCGCAGC
CTCCAAATTCTCCAAAACCCTCGCGTTTTCCCGCGGCTTCGCTTCCGGGGAGAGGAGATT
TTCAAAAATAAATTCCTCATCCACATCCTCCTCTTCCCCTAGCTCCTAGGCAGGGTCTCG
TCTCGACTCCGAATCTTAGGGTTTCTCCTCCCCGCTCCCCGCCGCGGGCGCCATGGAGGC
GGTGGTCGTCGACGCGGGGTCGAAGCTGCTCAAGGCCGGCATCGCCTTGCCCGACCAGTC
CCCATCGCTGGTGATGCCGTCGAAGATGAAGTTGGAGGTAGAGGACGGTCAGATGGGCGA
CGGCGCGGTGGTGGAGGAGGTGGTGCAGCCGGTGGTGCGTGGCTTCGTCAAGGACTGGGA
CGCCATGGAGGACCTGCTCAACTACGTCCTGTACAGCAACATTGGGTGGGAGATTGGGGA
TGAGGGCCAGATCCTCTTCACAGAGCCGCTCTTCACACCCAAGGCACTTCGGGAGCAACT
GGCGCAACTTATGTTCGAAAAATTCAATGTTTCAGGCTTTTATGACTCTGAGCAGGCTGT
ATTGTCACTTTATGCAGTTGGACGCATTTCGGGCTGTACAGTGGACATTGGGCATGGGAA
AATCGATATTGCTCCAGTTTGTGAAGGTGCTGTTCAGCACATAGCATCAAAGAGATTTGA
TATTGGAGGAACTGACTTGACAAACCTATTTGCGGAAGAACTCAAAAAATCTAACTCATC
GGTAAACATTGATATTTCTGATGTTGAGCGGCTGAAAGAGCAGTATGCATGCTGTGCAGA
AGATCAAATGGCCTTTGAAGCTATAGGAAGCTCATGCCGACCAGAAAGGCACACACTTCC
AGATGGGCAGGTTATAACAATTGAAAAAGAACGGTACATTGTTGGTGAAGCTTTATTTCA
ACCCCACATTTTGGGCTTAGAAGATTATGGAATTGTTCATCAGCTGGTTACAAGCGTCTC
GAATGTCACACCAGAGTACCATCGTCAGCTGCTTGAAAACACTATGTTATGTGGTGGCAC
TGCATCAATGACTGGTTTTGAAGACAGGTTCCAGAGAGAAGCAAATCTGTCTGCTTCAGC
AATCTGCCCATCTCTTGTAAAGCCTCCAGAATATATGCCCGAGAACCTAGCTAGGTACTC
GGCCTGGCTGGGCGGTGCAATATTGGCCAAGGTCGTTTTCCCGCAAAACCAGCACGTCAC
CAAGGGAGACTACGACGAGACTGGTCCATCCATCGTTCACAAGAAGTGCTTCTGAATAAC
AGCTCGCCTTGGAGGCATGAACACCTTGCACGGGGCGTGGATGCACGAATCTACAGTTTA
CTGGCATGTAGGGGCCTGCCTGCCCTGTGCTTCAACTCGCTGTACTAACTTCCTCTGAAG
CTGCGGTTCTGAGCAATTCATTAGATTCGGTTGTGCCCGCGGCTGCCAGGTCCAGTTTAG
ATGGTGTTTGTTACACTTGTTACTAGCCATTCAGGATGCAGTAGAATCTAACATTGGCAT
CTATTTATTACAAGTTGTAGAGGATTGTACCTGGCAACGCTCGTAGGCTGCATTCGTTTG
ATTGTCCGTTCACCGAGCGTACGGAAATCAGTTCATTCTGTGATTCTCCCTTCCAATTGC
TCTCTGAATTCTGTGTAGCTGTAGTGCTGTGTAGCAAACTACAAGAAAACAAAGCTTAGC
TAGAAGCGGTATTGTTCTTCCAAGTTGATTGGCAATTTGAGCTGTTCTATGAGTAAT