Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0781400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:32394938:32397257:-1 gene:Os03g0781400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribose 5-phosphate isomerase family protein. (Os03t0781400-01);Similar to ribose-5-phosphate isomerase. (Os03t0781400-02)
Sequence	ATGGACGCCGTTGCCGGGGCAAGCGTGAGCTCCTCTTCGGCGCGGCTCCGCCCGTGCCCA CGCCCCCGCCGCATCGGCAACGTCGCACCGGCCACCGTGCGCCGCCGTAGCCGGAGACGT GCTGTGACCTGCGCGGCCGCCGCGGACGCCGACGTCGTCGGCCTCTTCGACGCCGCCAAG CTCACGGTGGACAGGTTTGTGGAGAGCGGCATGGTGGTCGGGCTCGGCTCCGGCCCGGCG TCCGGCCTCGCCATCCAGTACCTCGGCACTCGCCTCCGGCGAGGGTCTCTCACTGGCATC CTTGGAATACCCTCGTCCACGATCAGTGCAAGTGAGGCAGTGAAAGCAGGGATACAGGTC AGCAGCTACGAGGAAGGCACCCAAATTGACTTTGCTTTCACTGATGCTGATATAATTGAA GAGGACACAATGACCGCTGTCATTGGCCGTCGGAAAACGGAGAGCGGAGAGCCTTCTTTC ATGGTGGAGAAGGGTATTGTTAAATCAGCTGATAAACTTGCCTTCATCATTGGCCATGAA AAATATGTGAAAGGCATCGAAGGTTCAATTCCAGTCTTGGTGAAAAGTGCAAATTGGATC GACACTGCTGAAGAGATTGATGACTTGTTCCTAGGAGACGCAGAGGTATGGAGGCGGCCA TCGATTGGAACCGCTGGTCCATTAGGAGGTGACTTCCCATTGGTTACCAAGGAGGGCCAT CATGTACTTGATGTTATCTTCACAACTCCCATCCCGGATCTTGGTAAGGTAGCAGAAAGC TTGGAGAAAATTGCCGGTGTCGTGGACCATGGGATAGTTTCCAGCATTCCATCATATGTC GTAGTTGCATTGAACGGGGAAGTGCAGGTCTTGGATGAGAAGTCATCGGTGATACCATAG

Peptide Sequence

PEP ID	Os03t0781400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:32394938:32397257:-1 gene:Os03g0781400 transcript:Os03t0781400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribose 5-phosphate isomerase family protein. (Os03t0781400-01);Similar to ribose-5-phosphate isomerase. (Os03t0781400-02)
Sequence	MDAVAGASVSSSSARLRPCPRPRRIGNVAPATVRRRSRRRAVTCAAAADADVVGLFDAAK LTVDRFVESGMVVGLGSGPASGLAIQYLGTRLRRGSLTGILGIPSSTISASEAVKAGIQV SSYEEGTQIDFAFTDADIIEEDTMTAVIGRRKTESGEPSFMVEKGIVKSADKLAFIIGHE KYVKGIEGSIPVLVKSANWIDTAEEIDDLFLGDAEVWRRPSIGTAGPLGGDFPLVTKEGH HVLDVIFTTPIPDLGKVAESLEKIAGVVDHGIVSSIPSYVVVALNGEVQVLDEKSSVIP

Transcript Sequence

Transcript ID	Os03t0781400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:32394938:32397257:-1 gene:Os03g0781400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribose 5-phosphate isomerase family protein. (Os03t0781400-01);Similar to ribose-5-phosphate isomerase. (Os03t0781400-02)
Sequence	ACCCCTTATCCGCTTCGTCAATGTGCCATCCATCCAATGTATGCAACTGTCAAGCTCGCT AGGCCAGCAAGCTGAGGCACCAGCCCAACCATGGACGCCGTTGCCGGGGCAAGCGTGAGC TCCTCTTCGGCGCGGCTCCGCCCGTGCCCACGCCCCCGCCGCATCGGCAACGTCGCACCG GCCACCGTGCGCCGCCGTAGCCGGAGACGTGCTGTGACCTGCGCGGCCGCCGCGGACGCC GACGTCGTCGGCCTCTTCGACGCCGCCAAGCTCACGGTGGACAGGTTTGTGGAGAGCGGC ATGGTGGTCGGGCTCGGCTCCGGCCCGGCGTCCGGCCTCGCCATCCAGTACCTCGGCACT CGCCTCCGGCGAGGGTCTCTCACTGGCATCCTTGGAATACCCTCGTCCACGATCAGTGCA AGTGAGGCAGTGAAAGCAGGGATACAGGTCAGCAGCTACGAGGAAGGCACCCAAATTGAC TTTGCTTTCACTGATGCTGATATAATTGAAGAGGACACAATGACCGCTGTCATTGGCCGT CGGAAAACGGAGAGCGGAGAGCCTTCTTTCATGGTGGAGAAGGGTATTGTTAAATCAGCT GATAAACTTGCCTTCATCATTGGCCATGAAAAATATGTGAAAGGCATCGAAGGTTCAATT CCAGTCTTGGTGAAAAGTGCAAATTGGATCGACACTGCTGAAGAGATTGATGACTTGTTC CTAGGAGACGCAGAGGTATGGAGGCGGCCATCGATTGGAACCGCTGGTCCATTAGGAGGT GACTTCCCATTGGTTACCAAGGAGGGCCATCATGTACTTGATGTTATCTTCACAACTCCC ATCCCGGATCTTGGTAAGGTAGCAGAAAGCTTGGAGAAAATTGCCGGTGTCGTGGACCAT GGGATAGTTTCCAGCATTCCATCATATGTCGTAGTTGCATTGAACGGGGAAGTGCAGGTC TTGGATGAGAAGTCATCGGTGATACCATAGCACCGAAAATACAAATTCACCAAGTTTTAC AGAAGAATCTATTGCAGATAGGCTGAAAAATGCCAGTGAGTTAATCGTGTGGCAGTATTT TTTTTCACCATACGACATTGTTGTCGTTCGGTTTATGACAACCACCACACGACCGGAGAA TTTTACAACCCGAGATCTACAGTTACTGTGAAGAATCGTGTGAATTTTTCTGTTTTTTTT TTTGTGAATCACGTCTATATTAAGTTTTCAGAGACCATGGATTAAAAGTTTGAGCCGAGT CATAAAAGAAAGTTGGCCAGCGACCATGTAATATGTATGACCAATTGGCAAAATATTCTT CTCGAAGCATCTTTCCAGGCTTCCGCTGAAACGCGTACACGTTTTCTCGATC