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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0780800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:32376007:32378380:1 gene:Os03g0780800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FATTY ACID 2-HYDROXYLASE 2 description:Fatty acid 2-hydroxylase, Resistance to rice blast fungus infection (Os03t0780800-01);Fatty acid hydroxylase domain containing protein. (Os03t0780800-02)
Sequence

ATGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCAT
CTTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGC
TTTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACC
ATATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATT
CAGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACT
TTGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTAC
CTTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCT
ACTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCA
ACTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACT
CACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTAT
CACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGG
GATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGA

Peptide Sequence

PEP ID

Os03t0780800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:32376007:32378380:1 gene:Os03g0780800 transcript:Os03t0780800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FATTY ACID 2-HYDROXYLASE 2 description:Fatty acid 2-hydroxylase, Resistance to rice blast fungus infection (Os03t0780800-01);Fatty acid hydroxylase domain containing protein. (Os03t0780800-02)
Sequence

MVVQEFTVDLNKPLVFQVGHLEERYQEWVHQPIVSKEGPRFFGNDVLEFLTRTKWFAVPT
IWLPVVCWLLVKSIRMGHTIQEVGLMALFGIFIWTLIEYTLHRFLFHIETKTYWANTAHY
LLHGCHHKHPMDSLRLVFPPTATAILCVPFWKLVAFFATPTITPALFGGGLLGYVMYDCT
HYYLHHGQPSKEPAKNLKRYHLNHHFRIQNKGFGITSSLWDYVFGTLPPSKTTGKNN

Transcript Sequence

Transcript ID

Os03t0780800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32376007:32378380:1 gene:Os03g0780800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FATTY ACID 2-HYDROXYLASE 2 description:Fatty acid 2-hydroxylase, Resistance to rice blast fungus infection (Os03t0780800-01);Fatty acid hydroxylase domain containing protein. (Os03t0780800-02)
Sequence

CTATTCTCCGCTCCTCGCGTCGTCGTCCTCCGAGAGGGGGAGGAGAAGGCGAGAAGGGGC
TCCGGTGGTGGGAGAGGGAGACCGCCATTGCCGCTACTTCCGAGTTCAGATTGGGGAAGA
TGGTTGTCCAGGAGTTCACCGTTGATCTGAACAAGCCTCTCGTTTTCCAGGTTGGCCATC
TTGAGGAACGTTATCAGGAATGGGTTCATCAACCTATCGTGAGCAAGGAAGGTCCACGCT
TTTTCGGAAATGATGTCCTGGAGTTCTTGACGCGCACAAAGTGGTTTGCTGTGCCAACCA
TATGGCTGCCTGTCGTCTGCTGGTTGCTTGTGAAATCTATTCGGATGGGTCATACTATTC
AGGAAGTAGGTCTAATGGCCCTATTTGGAATATTCATTTGGACATTGATCGAGTATACTT
TGCACCGCTTCCTATTCCACATTGAGACCAAAACCTATTGGGCAAACACAGCACATTACC
TTCTTCATGGATGCCACCATAAGCATCCTATGGACTCACTCAGGCTTGTATTCCCCCCTA
CTGCAACAGCAATTTTGTGTGTGCCGTTCTGGAAGCTGGTAGCGTTCTTCGCAACTCCAA
CTATCACTCCTGCGCTATTTGGTGGTGGCCTGTTGGGATATGTGATGTATGACTGCACTC
ACTATTACTTGCACCATGGACAACCATCCAAAGAGCCAGCGAAAAATCTCAAGCGGTATC
ACCTCAACCACCACTTCAGAATCCAAAACAAAGGCTTTGGCATCACCTCATCACTCTGGG
ATTACGTTTTTGGGACATTGCCTCCGTCGAAGACCACCGGAAAGAACAACTGAGCCACTG
ACAGAAATGTATTGTTTTGCATGAGAAATTTTAGAGGATATGTAATATATATATTAAGTC
TAGGCACAACTGCTTGTTTTGTCTTTCTGGGACAACAGGTTCACATGCCCATTCAGTTCG
AATTCCTGTGGTTTACTGATGACTGCCTTGATGTGGGTGAAGAAGACATTTCATTGCCTT
GACATCCAATGTTCTGAATTCAGAT