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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0780400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:32360719:32363837:-1 gene:Os03g0780400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 2 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os03t0780400-01)
Sequence

ATGGCGTTCATGCGTTCCCACTCCAATGCATCCTCCGGTATGGGGGTTGCTCCTGACATC
AGGGACACATTCCTTGAGCTTCAGATGAAGAAAGCATTTCGCTATGTTATCTTCAAAATC
GAGGAAAAGCAAAAGCAAGTTGTTGTGGAGAAGACCGGGGCAACAACTGAGAGTTATGAT
GATTTCCTGGCATCTCTCCCAGAAAATGACTGCAGATATGCCCTCTATGATTTTGACTTT
GTTACTGGGGAGAATGTGCAAAAGAGCAAGATTTTCTTCATCGCCTGGTCTCCATCAACA
TCCCGGATCCGTGCTAAGATGCTGTACTCCACCTCCAAGGATCGCATCAAGCAAGAACTT
GATGGATTCCACTACGAGATCCAGGCAACCGACCCAACTGAGGTAGACCTTGAGGTCCTC
CGGGAGCGGGCTCATTAA

Peptide Sequence

PEP ID

Os03t0780400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:32360719:32363837:-1 gene:Os03g0780400 transcript:Os03t0780400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 2 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os03t0780400-01)
Sequence

MAFMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYD
DFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL
DGFHYEIQATDPTEVDLEVLRERAH

Transcript Sequence

Transcript ID

Os03t0780400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32360719:32363837:-1 gene:Os03g0780400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 2 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os03t0780400-01)
Sequence

CTCTCCACACCAAAAGACGCCGCCCAACTCGCGAAGGCGGAAAAGGAAAAAAAGAGAGAA
AAAAAAAGGAAGAAAAAAAAATAAAACTCGCGCACAGCAACCGAATCATCTGCCTCCTCC
TCAAGTAGTCTAGTCCTCCTCTCTTCTCCGGAGTCTGCGTGCGATCGAAGCAGAGGCGCG
GCGCTCCTCCTCCTCCTCCGGCTCCGATCCCCATGGCGTTCATGCGTTCCCACTCCAATG
CATCCTCCGGTATGGGGGTTGCTCCTGACATCAGGGACACATTCCTTGAGCTTCAGATGA
AGAAAGCATTTCGCTATGTTATCTTCAAAATCGAGGAAAAGCAAAAGCAAGTTGTTGTGG
AGAAGACCGGGGCAACAACTGAGAGTTATGATGATTTCCTGGCATCTCTCCCAGAAAATG
ACTGCAGATATGCCCTCTATGATTTTGACTTTGTTACTGGGGAGAATGTGCAAAAGAGCA
AGATTTTCTTCATCGCCTGGTCTCCATCAACATCCCGGATCCGTGCTAAGATGCTGTACT
CCACCTCCAAGGATCGCATCAAGCAAGAACTTGATGGATTCCACTACGAGATCCAGGCAA
CCGACCCAACTGAGGTAGACCTTGAGGTCCTCCGGGAGCGGGCTCATTAAGGCCCTGGCC
CTGATGATCGATCACCTGCGAATCTCAAGTCAAGACGCAAATTCATCCTATCAGTGATGC
TCCCTTGCGATACTATTGTTAATAAGAAAGATATCCATGTTTCCTGTAAAACGTATCCCC
ACCATCATCATCATCATCATCGTTTAGCCTTGCCTGCATGATTCTAGCTGCAGATGGAGT
GTTGTCGGAGATTTACCCGTATGAGGTCTCAGAGCCTGTAAAACGTATGAAACACCCTCT
CCCAAACTCTTATATTGTGGTATTAATATGGATTACTGGGTGTGGATTGTCC