Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0778400-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:32307046:32308070:1 gene:Os03g0778400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0778400-00)
Sequence

ATGGCGGCCGACGCGCTCGTCGTGGCGGGGCAGGCGAAGGCGAGGCACCCGCTGAGCCAG
ATCGCGGAGAGCGGGACGCACCGGCTGCTGCTGAAGCAGTGGCTCAAGGAGGAGGACCTG
CTCGCCCGCCGCGTCGCCCTGCGGGAGGCCCGCCTCGACGGCGCCCGCAAGGAGATCGCC
TTCCTCTACTGCGCCTTCTTCGCCTTCCACGCCGCCTCCATCCTCCTCCTCTTCCTCTCC
GCCTCCGCCTCCACCTCCGCGGCGTGCCGGCGCTCGTGGATCCCCTGCCTCGTGTCGCTG
CTCTCGTCGCTGGCCATGCTGTGGGCGCTGCGGTACAAGGCGGACACGGAGGCGGTGCTG
GAGCGGCTGCTGGCGCGGGAGCGGGAGGACGCGCTGCTGCTCGGCAAGTGCGTCGCCGAG
CTCAAGCGGAAGGGGCTCGAGTTCGACCTCCTCAAGGAGGTGGACGCGCTGCGCCGCGCC
AAGAGCCTGCGCGTCGAGGCCAAGGGCGGCGCCGGCGGCGAGAGGCCCAAGCGCTGGGCG
GCCAGGGACCTCGCCGTCTTCCTCCTCTTCGGCGCCGCCTGCGGCGTCCTCGTGCTCACC
AGGTACTTGCTCTGCAATTAG

Peptide Sequence

PEP ID

Os03t0778400-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:32307046:32308070:1 gene:Os03g0778400 transcript:Os03t0778400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0778400-00)
Sequence

MAADALVVAGQAKARHPLSQIAESGTHRLLLKQWLKEEDLLARRVALREARLDGARKEIA
FLYCAFFAFHAASILLLFLSASASTSAACRRSWIPCLVSLLSSLAMLWALRYKADTEAVL
ERLLAREREDALLLGKCVAELKRKGLEFDLLKEVDALRRAKSLRVEAKGGAGGERPKRWA
ARDLAVFLLFGAACGVLVLTRYLLCN

Transcript Sequence

Transcript ID

Os03t0778400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32307046:32308070:1 gene:Os03g0778400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0778400-00)
Sequence

AACACGCCAAAACCGCAACCAAATCCCCTCACCCCCACGACGCACGCGAAACCACCTCGA
CGAATCCATGGCGGCCGACGCGCTCGTCGTGGCGGGGCAGGCGAAGGCGAGGCACCCGCT
GAGCCAGATCGCGGAGAGCGGGACGCACCGGCTGCTGCTGAAGCAGTGGCTCAAGGAGGA
GGACCTGCTCGCCCGCCGCGTCGCCCTGCGGGAGGCCCGCCTCGACGGCGCCCGCAAGGA
GATCGCCTTCCTCTACTGCGCCTTCTTCGCCTTCCACGCCGCCTCCATCCTCCTCCTCTT
CCTCTCCGCCTCCGCCTCCACCTCCGCGGCGTGCCGGCGCTCGTGGATCCCCTGCCTCGT
GTCGCTGCTCTCGTCGCTGGCCATGCTGTGGGCGCTGCGGTACAAGGCGGACACGGAGGC
GGTGCTGGAGCGGCTGCTGGCGCGGGAGCGGGAGGACGCGCTGCTGCTCGGCAAGTGCGT
CGCCGAGCTCAAGCGGAAGGGGCTCGAGTTCGACCTCCTCAAGGAGGTGGACGCGCTGCG
CCGCGCCAAGAGCCTGCGCGTCGAGGCCAAGGGCGGCGCCGGCGGCGAGAGGCCCAAGCG
CTGGGCGGCCAGGGACCTCGCCGTCTTCCTCCTCTTCGGCGCCGCCTGCGGCGTCCTCGT
GCTCACCAGGTACTTGCTCTGCAATTAGCCCACCCAACCGCAAGAGGAGGAAGGAGGAGA
TCGGATCGCAGTTGCGCCTTCTTGGCGTTGATCTAATCCCACGCTGCTCGTTCGTGCAGA
ACTGTCTGTTCTGCGAATTTTGATGTTGGTTACTCACTTCGTTCAGATTCGATACATTTT
ATTTTGCTTTTTGTGATTGTGATTATTTCAGAGAGCAAATTTACTCTCCAAATGTGCACT
AATTTAAGTAGCCTCTCATCTGAATTTCTCCAATCCCCAATCACTCCATTATTCAGAGGT
AGTGATGTTCAGAATTATTTACCTTGGGACAAGGATTTTTTGCTTGA