Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0775600-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:32160281:32163775:1 gene:Os03g0775600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0775600-01);Similar to mRNA, clone: RTFL01-02-G05. (Os03t0775600-02)
Sequence

ATGGCTGATGAGGTGGCTTTTGAGACTGCCAGGAAGATCATCATGCACCCGCTTTATACG
CCGAGGTCTTCGCCGTGGCTTGACTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAG
GTGGATGAGTCTGCGCCGGACCGTCTCACGCTCAACCACATCCCGCTGTCTCCCGATACG
GTTATCGAGGTGAATGGTCAGCGGAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTC
AGGAGGGACAGGGTTGACAAAATGACCGAGGAGGCTACATTCGTGAGCACAGATAGTATA
AGGATGACAGGGAGTGTCAGGTTTCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGC
GACCTAGAGTTGTGCAGTGCCAATGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGA
TGGAATATGAAGTGCCAACCAGCATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCC
ACAGCTTCAGAGTCTGTACATCCTGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGC
ACACCTATTATATTAACAAAGACTGTGCAGCATATATCACGGAGGAAATCCCAAATGAAA
CTAAAGCTTGATTCCATCCCTGAGAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAAT
GAGGACTCTTTGCAGGTATCAGAATCACAGAATCCCAAATCTGAGCAAGATGTGGATGTT
GATTATAACAGCTTGTACTCGAGGCAGGACTTTATAGAGGGCGAGGACGGTGAGCTTTCA
TGGTTTAATGCTGGTGTCCGAGTTGGGGTTGGGATTGGCCTTGGTATTTGTGTGGGTGTT
GGATTGGGTGTTGGCCTGCTGGTCCGGACGTACCAAAGCACCAGTAGGAACTTCAGGCGG
CGATTGCCCTGA

Peptide Sequence

PEP ID

Os03t0775600-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:32160281:32163775:1 gene:Os03g0775600 transcript:Os03t0775600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0775600-01);Similar to mRNA, clone: RTFL01-02-G05. (Os03t0775600-02)
Sequence

MADEVAFETARKIIMHPLYTPRSSPWLDLKVFYVRVSNCEVDESAPDRLTLNHIPLSPDT
VIEVNGQRSSMHTEFISSSLRRDRVDKMTEEATFVSTDSIRMTGSVRFQVFDKNDLLLTG
DLELCSANGVVGESKNSSKRWNMKCQPASSCNGFLKGKPSTASESVHPVIEVYLAGTFCG
TPIILTKTVQHISRRKSQMKLKLDSIPENEATEQQKEELNEDSLQVSESQNPKSEQDVDV
DYNSLYSRQDFIEGEDGELSWFNAGVRVGVGIGLGICVGVGLGVGLLVRTYQSTSRNFRR
RLP

Transcript Sequence

Transcript ID

Os03t0775600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:32160281:32163775:1 gene:Os03g0775600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os03t0775600-01);Similar to mRNA, clone: RTFL01-02-G05. (Os03t0775600-02)
Sequence

ATTATTCCCCCCCGATATCCTGATCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCG
CCGGAGCCCCGCCTCGAAGCGGAGGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTG
TGTGTGTGACGGCGACGGCCTCCTCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGG
GCGACGCGCGCGGCCTCCGTGTCTCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGA
ACTGGAGCTGTCCTATAGGCTATAGAAAGAGAAATTTATTCATGTAGTGTAATACATATG
TTTGGATCCGTGTCGGCGTGATAAGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAG
ATGGCTGATGAGGTGGCTTTTGAGACTGCCAGGAAGATCATCATGCACCCGCTTTATACG
CCGAGGTCTTCGCCGTGGCTTGACTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAG
GTGGATGAGTCTGCGCCGGACCGTCTCACGCTCAACCACATCCCGCTGTCTCCCGATACG
GTTATCGAGGTGAATGGTCAGCGGAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTC
AGGAGGGACAGGGTTGACAAAATGACCGAGGAGGCTACATTCGTGAGCACAGATAGTATA
AGGATGACAGGGAGTGTCAGGTTTCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGC
GACCTAGAGTTGTGCAGTGCCAATGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGA
TGGAATATGAAGTGCCAACCAGCATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCC
ACAGCTTCAGAGTCTGTACATCCTGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGC
ACACCTATTATATTAACAAAGACTGTGCAGCATATATCACGGAGGAAATCCCAAATGAAA
CTAAAGCTTGATTCCATCCCTGAGAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAAT
GAGGACTCTTTGCAGGTATCAGAATCACAGAATCCCAAATCTGAGCAAGATGTGGATGTT
GATTATAACAGCTTGTACTCGAGGCAGGACTTTATAGAGGGCGAGGACGGTGAGCTTTCA
TGGTTTAATGCTGGTGTCCGAGTTGGGGTTGGGATTGGCCTTGGTATTTGTGTGGGTGTT
GGATTGGGTGTTGGCCTGCTGGTCCGGACGTACCAAAGCACCAGTAGGAACTTCAGGCGG
CGATTGCCCTGATGGCCAGACCACCCCATGAATGTAGATGTGTCTTTATCTTGTTCTGTA
GGGAACTAACTGTCCAACCATCTTTCCTGTTCATGCTTGTGGTAGATATAAGTGAGGCTT
TTTGTTCTTCGATTCTGCAGTCACTCTGGAATCTGTTGCTCTCTTGTCTGCAATGCCAAT
CATTTTTGCTCCCTTGAGATGTAAATATTAGTCTGTATGGCAAATAAAGAGTCGAATCAC
TTGCTGCT