Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0769900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:31874977:31876331:1 gene:Os03g0769900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CF9. (Os03t0769900-01)
Sequence

ATGGACAGCCGCCTCGTGGCCTTCTCCCACCGCCGCCGGCGCTGGATCCTCCTCGCGGCG
GGCGGGGCGGCGGCGGTGTTCGGGGCGTACAAGATCTACCACCACCCGGCCGTGGCGGCC
CGCCGCCGCCGCCTCGCGCGGCTGGCCGGCGCGGTCGCGGCCTTCCTCGACGCCGCCGCG
GCCTCCGCCGACGCGGCGGCCCTGGTGGCCTCCGACCTCTCCGACTTCGTCCGCTCCGGC
TCGGACGAGCTCCCCCGCAGCGTCACGCAGCTGGCCAAGCTCGCCGCGTCCCCCGAGGTC
TCCGCGACCGTCTCCGCGATCTCGGAGGCCATCACCGCCGGGATACTCCGCGGAGTCGGA
TCCGACTCCGGGCCCGGCTCCGGCGGTGGCGTGGCCCTCTCCGATCGCCTCGTCGACAGG
CTCTTCTCGGAGTCCGGGGAGCGCCTTGCGGCTGCCATCGCCGGGAGCTTCGCCCGCCAT
CTCGTAGCTGCTATCTACTCCGCCTCTTCGACTCCCGGGGAGACCTCCTCGCCGATGAAG
TGGGTCAACTTGATTGCCACTGGAAAGGGCCAGAAGGCGATTAGTAATTGGGTTGAGGTG
TTCGTGAGCACAGCCGTGGGGGTGTTCGTTGACAAGACAATCCACATCAATACCTATGAT
CAGCTATTCCAAGGCCTTACCAATGCAAGCCATGATGCTAAGGTTAAAGAATTGCTTGTT
TCGGTATGCAACGGGGCAGTGGAGACTATGGTGAAGGCCACTCACCATGTTATGTCCAAT
GCCAATTATAAATCGGTTGGCAGTGGCAGCAATGGTGCTGGGGAAGGGTGGGTCGAGACA
GTGTCGAGCACATTGGCAGTTCCAAGCAACAGGAAGTTTGTGCTTGATGTTACTGGTAGA
GTTACATTTGAGACAGTGAGGTCGTTCCTTGAGTTCGCACTGTGGAAAATGCACGCTGGG
GCGAAGAAGGGTGGCAACACAGTGATGGATAGCGGACTGCGCGCGATGCAATACATGACT
GATAAGTCTATGGTTATCGCCACAATATGCATTACACTTTGTTTGCATGTTTTGAATGGC
ACTCGGCTCCTGGTAACAGCTTGA

Peptide Sequence

PEP ID

Os03t0769900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:31874977:31876331:1 gene:Os03g0769900 transcript:Os03t0769900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CF9. (Os03t0769900-01)
Sequence

MDSRLVAFSHRRRRWILLAAGGAAAVFGAYKIYHHPAVAARRRRLARLAGAVAAFLDAAA
ASADAAALVASDLSDFVRSGSDELPRSVTQLAKLAASPEVSATVSAISEAITAGILRGVG
SDSGPGSGGGVALSDRLVDRLFSESGERLAAAIAGSFARHLVAAIYSASSTPGETSSPMK
WVNLIATGKGQKAISNWVEVFVSTAVGVFVDKTIHINTYDQLFQGLTNASHDAKVKELLV
SVCNGAVETMVKATHHVMSNANYKSVGSGSNGAGEGWVETVSSTLAVPSNRKFVLDVTGR
VTFETVRSFLEFALWKMHAGAKKGGNTVMDSGLRAMQYMTDKSMVIATICITLCLHVLNG
TRLLVTA

Transcript Sequence

Transcript ID

Os03t0769900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:31874977:31876331:1 gene:Os03g0769900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CF9. (Os03t0769900-01)
Sequence

CACGAAAAACACGCGAAGGGAAAAAAAAAGGGCCAAAAAAAAAAGAAAAAAAAACAGAGA
GAGGGAGACCGGCACGGTACGCGCACCGCACCACACGAACCAATCCGAAACCCTAGCTCC
GGCGAGCCGCCGCCGCCATGGACAGCCGCCTCGTGGCCTTCTCCCACCGCCGCCGGCGCT
GGATCCTCCTCGCGGCGGGCGGGGCGGCGGCGGTGTTCGGGGCGTACAAGATCTACCACC
ACCCGGCCGTGGCGGCCCGCCGCCGCCGCCTCGCGCGGCTGGCCGGCGCGGTCGCGGCCT
TCCTCGACGCCGCCGCGGCCTCCGCCGACGCGGCGGCCCTGGTGGCCTCCGACCTCTCCG
ACTTCGTCCGCTCCGGCTCGGACGAGCTCCCCCGCAGCGTCACGCAGCTGGCCAAGCTCG
CCGCGTCCCCCGAGGTCTCCGCGACCGTCTCCGCGATCTCGGAGGCCATCACCGCCGGGA
TACTCCGCGGAGTCGGATCCGACTCCGGGCCCGGCTCCGGCGGTGGCGTGGCCCTCTCCG
ATCGCCTCGTCGACAGGCTCTTCTCGGAGTCCGGGGAGCGCCTTGCGGCTGCCATCGCCG
GGAGCTTCGCCCGCCATCTCGTAGCTGCTATCTACTCCGCCTCTTCGACTCCCGGGGAGA
CCTCCTCGCCGATGAAGTGGGTCAACTTGATTGCCACTGGAAAGGGCCAGAAGGCGATTA
GTAATTGGGTTGAGGTGTTCGTGAGCACAGCCGTGGGGGTGTTCGTTGACAAGACAATCC
ACATCAATACCTATGATCAGCTATTCCAAGGCCTTACCAATGCAAGCCATGATGCTAAGG
TTAAAGAATTGCTTGTTTCGGTATGCAACGGGGCAGTGGAGACTATGGTGAAGGCCACTC
ACCATGTTATGTCCAATGCCAATTATAAATCGGTTGGCAGTGGCAGCAATGGTGCTGGGG
AAGGGTGGGTCGAGACAGTGTCGAGCACATTGGCAGTTCCAAGCAACAGGAAGTTTGTGC
TTGATGTTACTGGTAGAGTTACATTTGAGACAGTGAGGTCGTTCCTTGAGTTCGCACTGT
GGAAAATGCACGCTGGGGCGAAGAAGGGTGGCAACACAGTGATGGATAGCGGACTGCGCG
CGATGCAATACATGACTGATAAGTCTATGGTTATCGCCACAATATGCATTACACTTTGTT
TGCATGTTTTGAATGGCACTCGGCTCCTGGTAACAGCTTGATGATGTGTTCAAGATCAAC
ACGGGTGTATTTGGATTGCATTGTTGGTACATGACTTGTAGGAAAATTTATACTGAAACT
GTAAATTCATCTAGAAAAGAAGAGCTGAAATGACG