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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0767800-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:31790667:31793202:1 gene:Os03g0767800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COR413-plasma membrane group multispanning transmembrane protein 1, cold-regulated 413-plasma membrane group multispanning transmembrane protein 1 description:Cold acclimation WCOR413 family protein. (Os03t0767800-01);Cold acclimation WCOR413 family protein. (Os03t0767800-02)
Sequence

ATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCG
GCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTC
GCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGG
CTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAAC
ATGCTGACCGCTCTCTTGGTCCCTTACATTTTCTTTACACTGCCTGGTGGGCTGTTCTCT
CTGTTGAGGGGAGAAATTGGAAAATGGATTGCGATCATTGCTGTCATCCTTCGTCTCTTC
TTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGGTGCTGTGATCCTTCTCATTGCT
GTTGCCCCGAACCTGTTTGCGAGCACCTTCCGAGGCGACTTAGTTGGCATCTTCATATGC
CTCATCATTGGATGCTACCTGCTTCAAGAGCACATCAGGGCGTCAGGTGGATTCAGGAAC
GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTAC
CCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAG

Peptide Sequence

PEP ID

Os03t0767800-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:31790667:31793202:1 gene:Os03g0767800 transcript:Os03t0767800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COR413-plasma membrane group multispanning transmembrane protein 1, cold-regulated 413-plasma membrane group multispanning transmembrane protein 1 description:Cold acclimation WCOR413 family protein. (Os03t0767800-01);Cold acclimation WCOR413 family protein. (Os03t0767800-02)
Sequence

MGKGFMSYLAMKTDAAGGEAAQAALIDADLQELGVAARKLANHALVLGGGLGFGTTFLKW
LAFFAAVYLLILDRTNWKTNMLTALLVPYIFFTLPGGLFSLLRGEIGKWIAIIAVILRLF
FPRHFPDWLELPGAVILLIAVAPNLFASTFRGDLVGIFICLIIGCYLLQEHIRASGGFRN
AFRKGNGVSNSIGILLLFIYPVWALVLNFL

Transcript Sequence

Transcript ID

Os03t0767800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:31790667:31793202:1 gene:Os03g0767800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COR413-plasma membrane group multispanning transmembrane protein 1, cold-regulated 413-plasma membrane group multispanning transmembrane protein 1 description:Cold acclimation WCOR413 family protein. (Os03t0767800-01);Cold acclimation WCOR413 family protein. (Os03t0767800-02)
Sequence

GAGCTTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGT
GGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGCGTGGGAGATGGGGAAGGGGTTCAT
GTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGAT
CGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGT
CCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGC
CGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTT
GGTCCCTTACATTTTCTTTACACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAAT
TGGAAAATGGATTGCGATCATTGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCC
TGATTGGTTAGAGCTGCCTGGTGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTT
TGCGAGCACCTTCCGAGGCGACTTAGTTGGCATCTTCATATGCCTCATCATTGGATGCTA
CCTGCTTCAAGAGCACATCAGGGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAA
CGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGT
GCTGAACTTTCTGTAGGCGCCACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCG
CTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTAT
CGTTTTGAGGAGATGGATAATGTATGTTTGGACCTCCTGCCTCCTGATGCACGTTTTCTT
GGCATTTTCGTTTGTTGTAGCTTTGCTATCAGCCCGTGTTTCGTCGTTCTGAGTGTACAA
GCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCT
CTTATGTGATT