Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0767000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:31764991:31766985:-1 gene:Os03g0767000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALLENE OXIDE SYNTHASE 1 description:Allene oxide synthase (CYP74A1), Biosynthesis of jasmonic acid (JA) (Os03t0767000-01)
Sequence	ATGGCCACGGCGGCGGCTTGCATCTCGTTCGCGTCGCCGTCGCCGGCGCGCGTCGTGATC AGGCGGCAGACGCGGGCGTCGGCGTCGGCGTCGGCGACGGACCGGCAGGAGGTGGTGTCG CCGAAGCGGCGGCTGCCGCTGCGGAAGGTGCCGGGGGACTACGGCCCGCCGGTGGTGGGC GCGATCCGGGACAGGTACGAGTACTTCTACGGCCCGGGCGGCCGCGACGGCTTCTTCGCG GCGCGCGTCCGCGCGCACCGCTCCACGGTGGTGCGCCTCAACATGCCGCCCGGGCCGTTC GTGGCGCGCGACCCGCGGGTGGTGGCGCTGCTCGACGCCGCCTCCTTCCCCGTCCTGTTC GACACGTCGCTCGTCGACAAGACCGACCTCTTCACCGGCACCTTCATGCCGTCCACCGAC CTCACCGGCGGGTACCGCGTCCTCTCCTACCTTGACCCCTCCGAGCCCAACCACGCGCCG CTCAAGACCCTCCTCTTCTACCTCCTCTCCCACCGGCGGCAGCAGGTGATCCCCAAGTTC CGCGAGGTGTACGGCGACCTGTTCGGCCTCATGGAGAACGACCTCGCCCGCGTCGGCAAG GCCGACTTCGGCGTCCACAACGACGCCGCCGCGTTCGGCTTCCTCTGCCAGGGGCTCCTC GGCCGCGACCCGGCCAAGTCGGCGCTGGGGCGCGACGGGCCCAAGCTGATCACCAAGTGG GTGCTGTTCCAGCTCAGCCCGCTGCTCAGCCTCGGCCTCCCCACCCTCGTCGAGGACACG CTCCTCCACTCGCTCCGCCTCCCGCCGGCGCTGGTGAAGAAGGACTACGACCGCCTCGCC GACTTCTTCCGGGACGCGGCCAAGGCCGTCGTCGACGAGGGGGAGCGCCTCGGCATTGCA CGGGAGGAGGCCGTGCACAACATCCTCTTCGCGCTCTGCTTCAACTCGTTCGGCGGGATG AAGATCCTGTTCCCGACGCTGGTGAAGTGGCTGGGCCGCGCCGGGGCGCGTGTGCACGGG CGGCTCGCCACCGAGGTGCGCGGCGCCGTGCGGGACAACGGCGGGGAGGTGACGATGAAG GCGCTGGCGGAGATGCCGCTGGTGAAGTCGGCGGTGTACGAGGCGCTGCGGATCGAGCCG CCGGTGGCGATGCAGTACGGGAGGGCGAAGCGGGACATGGTGGTGGAGAGCCACGACTAC GGGTACGAGGTGAGGGAAGGGGAGATGCTGTTCGGGTACCAGCCCATGGCGACCAAGGAC CCGCGGGTGTTCGCGCGGCCGGAGGAGTACGTGCCGGACAGGTTCCTCGGCGAGGACGGC GCGCGGCTGCTCCGCCACGTCGTGTGGTCCAACGGGCCCGAGACGGCGGCGCCCACCCTG CACGACAAGCAGTGCGCCGGCAAGGACTTCGTCGTGCTCGTCGCGCGCCTCCTCCTCGTC GAGCTCTTCCTCCGATACGACTCCTTCGACGTCGAGGTCGGCACCTCCACGCTCGGCTCA TCTGTCACCGTCACCTCGCTCAAGAAGGCCACCTTCTGA

Peptide Sequence

PEP ID	Os03t0767000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:31764991:31766985:-1 gene:Os03g0767000 transcript:Os03t0767000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALLENE OXIDE SYNTHASE 1 description:Allene oxide synthase (CYP74A1), Biosynthesis of jasmonic acid (JA) (Os03t0767000-01)
Sequence	MATAAACISFASPSPARVVIRRQTRASASASATDRQEVVSPKRRLPLRKVPGDYGPPVVG AIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRVVALLDAASFPVLF DTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKF REVYGDLFGLMENDLARVGKADFGVHNDAAAFGFLCQGLLGRDPAKSALGRDGPKLITKW VLFQLSPLLSLGLPTLVEDTLLHSLRLPPALVKKDYDRLADFFRDAAKAVVDEGERLGIA REEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRLATEVRGAVRDNGGEVTMK ALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKD PRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLV ELFLRYDSFDVEVGTSTLGSSVTVTSLKKATF

Transcript Sequence

Transcript ID	Os03t0767000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:31764991:31766985:-1 gene:Os03g0767000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALLENE OXIDE SYNTHASE 1 description:Allene oxide synthase (CYP74A1), Biosynthesis of jasmonic acid (JA) (Os03t0767000-01)
Sequence	GGCTGCGTGACTGTGTCTGCGTCGCGTCTCCTCCACTTTTAAAACCCCCAACGACGCTCG ATCCGAGATTAATTGTGCTCATACTGTTCGACGAATTGACACCATCTGCACACCTGCACC TGCACCTGCACGGCCGTGGCTGTGGACTTGCAGTTGGAGCTAGTAGCTAGCTCGGGGAGT AGTAGCTAGGTGTAGTTCATCGGATCAAGGGGGGGATGGCCACGGCGGCGGCTTGCATCT CGTTCGCGTCGCCGTCGCCGGCGCGCGTCGTGATCAGGCGGCAGACGCGGGCGTCGGCGT CGGCGTCGGCGACGGACCGGCAGGAGGTGGTGTCGCCGAAGCGGCGGCTGCCGCTGCGGA AGGTGCCGGGGGACTACGGCCCGCCGGTGGTGGGCGCGATCCGGGACAGGTACGAGTACT TCTACGGCCCGGGCGGCCGCGACGGCTTCTTCGCGGCGCGCGTCCGCGCGCACCGCTCCA CGGTGGTGCGCCTCAACATGCCGCCCGGGCCGTTCGTGGCGCGCGACCCGCGGGTGGTGG CGCTGCTCGACGCCGCCTCCTTCCCCGTCCTGTTCGACACGTCGCTCGTCGACAAGACCG ACCTCTTCACCGGCACCTTCATGCCGTCCACCGACCTCACCGGCGGGTACCGCGTCCTCT CCTACCTTGACCCCTCCGAGCCCAACCACGCGCCGCTCAAGACCCTCCTCTTCTACCTCC TCTCCCACCGGCGGCAGCAGGTGATCCCCAAGTTCCGCGAGGTGTACGGCGACCTGTTCG GCCTCATGGAGAACGACCTCGCCCGCGTCGGCAAGGCCGACTTCGGCGTCCACAACGACG CCGCCGCGTTCGGCTTCCTCTGCCAGGGGCTCCTCGGCCGCGACCCGGCCAAGTCGGCGC TGGGGCGCGACGGGCCCAAGCTGATCACCAAGTGGGTGCTGTTCCAGCTCAGCCCGCTGC TCAGCCTCGGCCTCCCCACCCTCGTCGAGGACACGCTCCTCCACTCGCTCCGCCTCCCGC CGGCGCTGGTGAAGAAGGACTACGACCGCCTCGCCGACTTCTTCCGGGACGCGGCCAAGG CCGTCGTCGACGAGGGGGAGCGCCTCGGCATTGCACGGGAGGAGGCCGTGCACAACATCC TCTTCGCGCTCTGCTTCAACTCGTTCGGCGGGATGAAGATCCTGTTCCCGACGCTGGTGA AGTGGCTGGGCCGCGCCGGGGCGCGTGTGCACGGGCGGCTCGCCACCGAGGTGCGCGGCG CCGTGCGGGACAACGGCGGGGAGGTGACGATGAAGGCGCTGGCGGAGATGCCGCTGGTGA AGTCGGCGGTGTACGAGGCGCTGCGGATCGAGCCGCCGGTGGCGATGCAGTACGGGAGGG CGAAGCGGGACATGGTGGTGGAGAGCCACGACTACGGGTACGAGGTGAGGGAAGGGGAGA TGCTGTTCGGGTACCAGCCCATGGCGACCAAGGACCCGCGGGTGTTCGCGCGGCCGGAGG AGTACGTGCCGGACAGGTTCCTCGGCGAGGACGGCGCGCGGCTGCTCCGCCACGTCGTGT GGTCCAACGGGCCCGAGACGGCGGCGCCCACCCTGCACGACAAGCAGTGCGCCGGCAAGG ACTTCGTCGTGCTCGTCGCGCGCCTCCTCCTCGTCGAGCTCTTCCTCCGATACGACTCCT TCGACGTCGAGGTCGGCACCTCCACGCTCGGCTCATCTGTCACCGTCACCTCGCTCAAGA AGGCCACCTTCTGACCACCGCCGGTCAAAGTCTCCGGCGCCCGGTCATCTTATTTTCCGT CCTCTTCTTCTTCACTAAATATTTTAGTAGTATTAGTAATTTTTTCACTCTGTATGGTGT GATCAATCAGCTTGTACGGATACGGAGTTGCACTGGTAGTGATTTTCTTTGCTGAGATAA TACTAGTAGAAGATATTTTTTTTCACAATTACTTTAAAAAATCATATTAATATATTTTTC AAATTTATTTTAACT