Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0766000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:31726005:31732261:-1 gene:Os03g0766000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seven transmembrane domain protein. (Os03t0766000-01)
Sequence

ATGACGGTGTTCCACTTCCTCAACTGCGCCGCCCTCACCTTCGGCCCCCACGTCGTCTAC
TACTCGGCCACCCCGCTGTCAGAGTATGACACAATTGGCACTTGTGTAAAAGCGGCTGTT
GTTTATCTTGGAACAGCACTAGTAAAGCTTGTTTGCTTAGCGACATTGCTCAAAGTACCT
GAGAATGATAGCTTTGATCCTTATCAGGAATTGATGAAAATCTTTATTGGGTTTATAGAT
GTTGCTGGTCTTTATTTTGCTTTGACACAGTTGACTCATAGAAACATCTCCCAGAATCAC
AAGTTTCAGGCAGTTGGTCTTGGTTGGGCTTTTGCTGACTCAGTTCTGCACCGTCTGGCG
CCTCTCTGGATTGGTGCAAGAGGACTTGAATTTACGTGGGAGTACATTTTTCAAGGACTT
GAAGCAAATGCCAATCTTGTTATGACGCTGTCCCTTGCTGCTTTAGGATCCTTGATGTGG
CTGAGGAAAAACAAACCTAGGACTTTGGTGCCAATAATTTATGCATGTGCTTTGCTTCTG
GCAACAATGCCATCTATCACCAGTTACTTGAGGAGATCATTAGAGTGGCAGACTCCAAAG
GTGGTTGGCTTCGAGCTGTTCTCCTCACTGGTCATGGCTTTCATCAGCTGGCAGCTGTTC
TCAGCTTGTCAGAGACCAATGTAA

Peptide Sequence

PEP ID

Os03t0766000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:31726005:31732261:-1 gene:Os03g0766000 transcript:Os03t0766000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seven transmembrane domain protein. (Os03t0766000-01)
Sequence

MTVFHFLNCAALTFGPHVVYYSATPLSEYDTIGTCVKAAVVYLGTALVKLVCLATLLKVP
ENDSFDPYQELMKIFIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA
PLWIGARGLEFTWEYIFQGLEANANLVMTLSLAALGSLMWLRKNKPRTLVPIIYACALLL
ATMPSITSYLRRSLEWQTPKVVGFELFSSLVMAFISWQLFSACQRPM

Transcript Sequence

Transcript ID

Os03t0766000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:31726005:31732261:-1 gene:Os03g0766000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seven transmembrane domain protein. (Os03t0766000-01)
Sequence

ACTCAAGCAGTCCAGCCCAAGTCGTCGCGCACCTCGGGCGATCCGACCTCGCCGTTGCTT
GCTCAGACGCCGGAGACGACGACGACGGCGGCGGCGGCGGCGGGGACGAGATGACGGTGT
TCCACTTCCTCAACTGCGCCGCCCTCACCTTCGGCCCCCACGTCGTCTACTACTCGGCCA
CCCCGCTGTCAGAGTATGACACAATTGGCACTTGTGTAAAAGCGGCTGTTGTTTATCTTG
GAACAGCACTAGTAAAGCTTGTTTGCTTAGCGACATTGCTCAAAGTACCTGAGAATGATA
GCTTTGATCCTTATCAGGAATTGATGAAAATCTTTATTGGGTTTATAGATGTTGCTGGTC
TTTATTTTGCTTTGACACAGTTGACTCATAGAAACATCTCCCAGAATCACAAGTTTCAGG
CAGTTGGTCTTGGTTGGGCTTTTGCTGACTCAGTTCTGCACCGTCTGGCGCCTCTCTGGA
TTGGTGCAAGAGGACTTGAATTTACGTGGGAGTACATTTTTCAAGGACTTGAAGCAAATG
CCAATCTTGTTATGACGCTGTCCCTTGCTGCTTTAGGATCCTTGATGTGGCTGAGGAAAA
ACAAACCTAGGACTTTGGTGCCAATAATTTATGCATGTGCTTTGCTTCTGGCAACAATGC
CATCTATCACCAGTTACTTGAGGAGATCATTAGAGTGGCAGACTCCAAAGGTGGTTGGCT
TCGAGCTGTTCTCCTCACTGGTCATGGCTTTCATCAGCTGGCAGCTGTTCTCAGCTTGTC
AGAGACCAATGTAAGGAATGAGTTTGCAAATTGCCGGAGATTCACGCTCCTGAGATGGCT
CCTGTTGTACTTCCACAGAATTAGGATGCGCCTTTTCAGCCTTGACACTATCTTTTCTGG
GGGTTCGATCATAGAACTTATTATTTAGAATCCTTTTTCTGTAAGTTTTAGTGGAGAAAC
ACATGCTCCAGTGAGTTGCCATTGTTAACAGCTCTTATAGGCATTGAACTAAAAGTATAT
TTTGCCCCTGCTGTGCTTCTTCTGTCAACCGCATGGCATCATCTAAAATGAAAGCCTATA
ACATTCAGTTTTGTCATCAGTTTATGGGAAAGTGAGTACACT