Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0765400-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:31694728:31696825:-1 gene:Os03g0765400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to nucleoporin p58/p45. (Os03t0765400-01);Conserved hypothetical protein. (Os03t0765400-02)
Sequence

ATGCTGTCCTCCACCGCTCTCCGGCCGCTGGCGCAGCCCGCCACGGCCACGGCCACGGCC
ACCGCCTTCTCGGCCTCCCGCACGGCCGCCGCGGCTGGGCGGCGCGGGTCGGCGGCGGGG
GTAGTGGTTCGCGCGGTGCGGAACTACGACTCGATCCCGAAGCGGGAGCCCTTCAGCTCG
AGCCGCAGCGTCCTCGACGAGTTCCTCAGGCAGGAGAAGCCTCTCGTCCAGCGCACCAAA
GACCAGATCACAGATTATTGCACAACCCTAGAAGGTGATGAGTGCTGCAGCTGTTGGGAT
GCTTACTTTGAACTCAATAAACTTGAGCAAGAGCTACCCAAAGAGGAAATTGCAAGGATG
GTGAAGGACTCCGAGGGAGATCCGAGGTACCTGATCAATAGCATCCATCACCGTTCAGAT
CTAAGAAAGAAGATGGCTGAGAAATCTCATAATTCACTATCATCAAACTCCCTGGGGCAA
GCTGCGAAGCCAAGGCCTTTCCCTGTGCCTGACGGATTGCCGAAAACACAGGAAGAGCTT
GCTGAAGAACAGGAGGCCCTAATGCCGGAGTCCTCCTATACGAGGCTACTGAGAAGAATG
GGGAGATTTCCTGATTGGTATACGCCTCGCCCAGATCATGAAACCGACTGA

Peptide Sequence

PEP ID

Os03t0765400-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:31694728:31696825:-1 gene:Os03g0765400 transcript:Os03t0765400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to nucleoporin p58/p45. (Os03t0765400-01);Conserved hypothetical protein. (Os03t0765400-02)
Sequence

MLSSTALRPLAQPATATATATAFSASRTAAAAGRRGSAAGVVVRAVRNYDSIPKREPFSS
SRSVLDEFLRQEKPLVQRTKDQITDYCTTLEGDECCSCWDAYFELNKLEQELPKEEIARM
VKDSEGDPRYLINSIHHRSDLRKKMAEKSHNSLSSNSLGQAAKPRPFPVPDGLPKTQEEL
AEEQEALMPESSYTRLLRRMGRFPDWYTPRPDHETD

Transcript Sequence

Transcript ID

Os03t0765400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:31694728:31696825:-1 gene:Os03g0765400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to nucleoporin p58/p45. (Os03t0765400-01);Conserved hypothetical protein. (Os03t0765400-02)
Sequence

TTCCATCCTTCCCAAAATCCACCGGAGAAGAAGACGATTAGCCGGGGACCACGCCGGAGA
AAAAAAAATGCTGTCCTCCACCGCTCTCCGGCCGCTGGCGCAGCCCGCCACGGCCACGGC
CACGGCCACCGCCTTCTCGGCCTCCCGCACGGCCGCCGCGGCTGGGCGGCGCGGGTCGGC
GGCGGGGGTAGTGGTTCGCGCGGTGCGGAACTACGACTCGATCCCGAAGCGGGAGCCCTT
CAGCTCGAGCCGCAGCGTCCTCGACGAGTTCCTCAGGCAGGAGAAGCCTCTCGTCCAGCG
CACCAAAGACCAGATCACAGATTATTGCACAACCCTAGAAGGTGATGAGTGCTGCAGCTG
TTGGGATGCTTACTTTGAACTCAATAAACTTGAGCAAGAGCTACCCAAAGAGGAAATTGC
AAGGATGGTGAAGGACTCCGAGGGAGATCCGAGGTACCTGATCAATAGCATCCATCACCG
TTCAGATCTAAGAAAGAAGATGGCTGAGAAATCTCATAATTCACTATCATCAAACTCCCT
GGGGCAAGCTGCGAAGCCAAGGCCTTTCCCTGTGCCTGACGGATTGCCGAAAACACAGGA
AGAGCTTGCTGAAGAACAGGAGGCCCTAATGCCGGAGTCCTCCTATACGAGGCTACTGAG
AAGAATGGGGAGATTTCCTGATTGGTATACGCCTCGCCCAGATCATGAAACCGACTGAAT
CAAGTCACCAAGCATCCATATACCGCTCCTTGTGAAAATTTTGTATTGGTTGCCGGATAA
TTATGATGCCTGAAGTTCTGTGGTTTGGGTAATGCACTAAGGTTCAGCAGCGTGGTAGCT
ATCCAGGTTAGATTGCTGTTGCTTGCTTTACTGAATGTATAATGGCGTGTGTTTTATGCT
GTTCAGGTCTTCCCCTCAGGATTCAGATAGCTCCTTCCCTGTAAACTCAAGCAATGTCCC
ATGAGATAGCTTGCACAAATTTGTCTTTCTGTATATATATGTTCTGGAATAGAGTTTCTG
AATCTGTTTCCTGGAGTT