Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0760600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:31455750:31458865:-1 gene:Os03g0760600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TIP41-like protein family protein. (Os03t0760600-01)
Sequence

ATGACTAAGGCGGCGGAGGCGTGGGAGGGCCCGACGGCGGCGGAGCTGAAGGCGGCCGGC
GCGGAGGCGATCCCCGGCGGGGTGCGGGTGAAGGGGTGGGTCATCCGGTCCCACAACGGC
CCCATCCTCAACTCCGCCTCGCTCCAGCTCTTTGAAGATAAACTTCAGACAACACATTTA
CCTGAGATGGTTTTTGGGGAGAGTTTCTTATCTCTTCAGCATGCTCAAACTGGCATTAGA
TTATATTTCAATGCGCTTGATGCTCTGAAGGCATGGAAACATGAAGCACTACCACCTGTT
GAAGTTCCTGCGGCAGCAAAGTGGAAGTTCAGGAGTAAGCCTTCTGATCAAGTAATACTT
GATTATGACTATACATTCACGACACCGTACAATGGGAGTGATGCTTTGGTTCAGAACCCA
GATAGTATTCAAACAAGTTTGGATGAACCCCGCAATTTGTGTTGGGAGGATTCTGAGGAT
CGGATTGACCTTGTTGCCCTTTCAGCAAAAGAACCAATTCTTTTCTATGACGAGGTTATC
CTGTATGAAGATGAGTTAGCCGATAATGGCATTTCATTCCTCACTGTGCGAGTGAGGGTG
ATGCCAACTGGTTGGTTCCTGCTCTTGCGTTTTTGGCTTAGGGTTGATGGTGTACTTATG
AGATTGAGGGATACCCGGGTGTATTGCTCTTTTGGTAGTGACGAAGCAAAACCCATTGTA
CTGCGTGAATGCTGCTGGAGGGAAGCAACATTTGCTAGTCTGTCTGCGAAGGGATACCCT
TCCGACTCTGCAGCATATGGAGACCCGAATCTTATTGCTCATAAGCTTCCAGTTGTGATG
CAGAAGATCCAAAAGCTGAAATTACCCAATTAA

Peptide Sequence

PEP ID

Os03t0760600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:31455750:31458865:-1 gene:Os03g0760600 transcript:Os03t0760600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TIP41-like protein family protein. (Os03t0760600-01)
Sequence

MTKAAEAWEGPTAAELKAAGAEAIPGGVRVKGWVIRSHNGPILNSASLQLFEDKLQTTHL
PEMVFGESFLSLQHAQTGIRLYFNALDALKAWKHEALPPVEVPAAAKWKFRSKPSDQVIL
DYDYTFTTPYNGSDALVQNPDSIQTSLDEPRNLCWEDSEDRIDLVALSAKEPILFYDEVI
LYEDELADNGISFLTVRVRVMPTGWFLLLRFWLRVDGVLMRLRDTRVYCSFGSDEAKPIV
LRECCWREATFASLSAKGYPSDSAAYGDPNLIAHKLPVVMQKIQKLKLPN

Transcript Sequence

Transcript ID

Os03t0760600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:31455750:31458865:-1 gene:Os03g0760600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TIP41-like protein family protein. (Os03t0760600-01)
Sequence

GGGCTCGCCTCTCGACCTCGGTGTTGCGCTCTCCTCCGCTCGGACCGCTCCTCGCCGGCG
ATCCCCCCGCCTCCACCGCCGCCGCCGCCGCCGCCGTCGATCTGCGCTGCCACGGCCGGG
GGGGAAGCTTGTGCTGAGGCGCAGTCCTGAAGAGAACCCCACTTGGGAGGCCGGGGGGCG
TCGAAGCTCCAAACAACCAAGCACCATCGTGACGAAGCACGCCACGGGAGATGACTAAGG
CGGCGGAGGCGTGGGAGGGCCCGACGGCGGCGGAGCTGAAGGCGGCCGGCGCGGAGGCGA
TCCCCGGCGGGGTGCGGGTGAAGGGGTGGGTCATCCGGTCCCACAACGGCCCCATCCTCA
ACTCCGCCTCGCTCCAGCTCTTTGAAGATAAACTTCAGACAACACATTTACCTGAGATGG
TTTTTGGGGAGAGTTTCTTATCTCTTCAGCATGCTCAAACTGGCATTAGATTATATTTCA
ATGCGCTTGATGCTCTGAAGGCATGGAAACATGAAGCACTACCACCTGTTGAAGTTCCTG
CGGCAGCAAAGTGGAAGTTCAGGAGTAAGCCTTCTGATCAAGTAATACTTGATTATGACT
ATACATTCACGACACCGTACAATGGGAGTGATGCTTTGGTTCAGAACCCAGATAGTATTC
AAACAAGTTTGGATGAACCCCGCAATTTGTGTTGGGAGGATTCTGAGGATCGGATTGACC
TTGTTGCCCTTTCAGCAAAAGAACCAATTCTTTTCTATGACGAGGTTATCCTGTATGAAG
ATGAGTTAGCCGATAATGGCATTTCATTCCTCACTGTGCGAGTGAGGGTGATGCCAACTG
GTTGGTTCCTGCTCTTGCGTTTTTGGCTTAGGGTTGATGGTGTACTTATGAGATTGAGGG
ATACCCGGGTGTATTGCTCTTTTGGTAGTGACGAAGCAAAACCCATTGTACTGCGTGAAT
GCTGCTGGAGGGAAGCAACATTTGCTAGTCTGTCTGCGAAGGGATACCCTTCCGACTCTG
CAGCATATGGAGACCCGAATCTTATTGCTCATAAGCTTCCAGTTGTGATGCAGAAGATCC
AAAAGCTGAAATTACCCAATTAACCCGACAACCCATCTCGTGTACATCAGCGTTTTTTTT
TTCCATTGACTGTTGGACGGTGTTCTCTTTCTGCTTATCATGTGCTGTGGTCTGTGGATG
CACGTTCCTGTAGCTGGCAATAGTATAAAAATTCTTGTGGTAAAGGCTATTTGTCTACTG
GGGCTTATCAGCTTTT