Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0754900-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:31134469:31139684:1 gene:Os03g0754900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-93 description:Similar to Cleavage stimulation factor, 50 kDa subunit. (Os03t0754900-01);Similar to Cleavage stimulation factor, 50 kDa subunit. (Os03t0754900-02)
Sequence	ATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCATCGTGGCG CACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCACCATGACG CCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCTCCTCCGC CTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGGGGCGTTC GACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCACCAATGCC GTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCACGAGGCC AGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGATGGGAAA TATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAAAATAAAG CAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTACTTTTTAC GATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACTGATATCT GCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAGGAAAGCA TTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTGTGGGGAT TACCTTTTAGCAGGGACTGATCACCCAGTGGCTCATCTATATGATATTAACACTTTCACA TGCTACTTATCGGCAAATTCACATGATTCCAATGCTGCCATTAATCAGGTCCGATACTCT TCTACTGGGAGCCTGTATGTGACTGCTTCCAAGGATGGTTCTCTGCGCATCTGGGATGGG ATATCCGCTGAATGTGTCCGGCCCATAATTGGAGCACATGCATCTGCAGAGGTTACTAGT GCAATTTTCACAAAAGATGAGAGGTATGTCCTATCATGTGGGAAGGATTCTTGTATAAAA TTATGGGAAGTTGGCTCTGGACGACTTGTCAAGCAATATGTAGGCGCTGTTCACAGACAA TTTCGATGTCAGGCTGTCTTCAACCAAACGGAGGAATTTGTAGTATCAACCGATGAACAA AACAGTGAGGTTGTCGTCTGGGATGCACTTACCGCTGAAAATGTAGCAAGGTTGCCCTCT GGCCACACCGGTGCCCCGAGGTGGCTTGGCCACTCCCCTGCAGAACCAGCCTTTGTTACA TGCGGTAACGATAGATCCGTCAGATTCTGGAAACAAACCGTGTAG

Peptide Sequence

PEP ID	Os03t0754900-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:31134469:31139684:1 gene:Os03g0754900 transcript:Os03t0754900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-93 description:Similar to Cleavage stimulation factor, 50 kDa subunit. (Os03t0754900-01);Similar to Cleavage stimulation factor, 50 kDa subunit. (Os03t0754900-02)
Sequence	MDAAVQEAKLLRQVNALIVAHLRDHNLTQAAAAVAAATMTPLAPPEPDGDDSVPANQLLR LVAKGLAVEREETGRGGGAFDSAAAAAGYGGLLPPLGTNAVDFSTQDVKGSSKSFPKHEA RHVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVIRTFY DHTQPINDLDFHPESPILISAAKDNTIRFFDFSKTVARKAFRVIQDTHNVRSVCFHPCGD YLLAGTDHPVAHLYDINTFTCYLSANSHDSNAAINQVRYSSTGSLYVTASKDGSLRIWDG ISAECVRPIIGAHASAEVTSAIFTKDERYVLSCGKDSCIKLWEVGSGRLVKQYVGAVHRQ FRCQAVFNQTEEFVVSTDEQNSEVVVWDALTAENVARLPSGHTGAPRWLGHSPAEPAFVT CGNDRSVRFWKQTV

Transcript Sequence

Transcript ID	Os03t0754900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:31134469:31139684:1 gene:Os03g0754900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-93 description:Similar to Cleavage stimulation factor, 50 kDa subunit. (Os03t0754900-01);Similar to Cleavage stimulation factor, 50 kDa subunit. (Os03t0754900-02)
Sequence	AGTCCAGACCAGTTCCTAGCTCCGAACAGAGTCCTTCTCCGAAGTGCGAACTCGCTGCAA GCCGAATCCGCCGCGCCGCCACACGGAGACGAGAGGGAGAGGTCGAGAGGGAGAGGGCGA GGGCGAGATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCAT CGTGGCGCACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCAC CATGACGCCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCT CCTCCGCCTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGG GGCGTTCGACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCAC CAATGCCGTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCA CGAGGCCAGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGA TGGGAAATATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAA AATAAAGCAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTAC TTTTTACGATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACT GATATCTGCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAG GAAAGCATTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTG TGGGGATTACCTTTTAGCAGGGACTGATCACCCAGTGGCTCATCTATATGATATTAACAC TTTCACATGCTACTTATCGGCAAATTCACATGATTCCAATGCTGCCATTAATCAGGTCCG ATACTCTTCTACTGGGAGCCTGTATGTGACTGCTTCCAAGGATGGTTCTCTGCGCATCTG GGATGGGATATCCGCTGAATGTGTCCGGCCCATAATTGGAGCACATGCATCTGCAGAGGT TACTAGTGCAATTTTCACAAAAGATGAGAGGTATGTCCTATCATGTGGGAAGGATTCTTG TATAAAATTATGGGAAGTTGGCTCTGGACGACTTGTCAAGCAATATGTAGGCGCTGTTCA CAGACAATTTCGATGTCAGGCTGTCTTCAACCAAACGGAGGAATTTGTAGTATCAACCGA TGAACAAAACAGTGAGGTTGTCGTCTGGGATGCACTTACCGCTGAAAATGTAGCAAGGTT GCCCTCTGGCCACACCGGTGCCCCGAGGTGGCTTGGCCACTCCCCTGCAGAACCAGCCTT TGTTACATGCGGTAACGATAGATCCGTCAGATTCTGGAAACAAACCGTGTAGAAAATGTA GATCCACCAACGAATCAACCCAGAAGTTGGTGGTAGAATTAACTAATACATTGAGATTAA AAAACCTTGTTCATGTGCTGTTCCTTAATTATTTGATTAGTTGTACACTTGTACATGCTA CTGAAGTTGTACACTGATGATACTGTACCCAACTTGGTAGGAAAATTTTGGCTCTTGTTG GCATTCATGTAAGCAGAATTCAGAACTTG