Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0751400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30981065:30984498:1 gene:Os03g0751400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein l6. (Os03t0751400-01)
Sequence

ATGGCGTCCCTCTCCCTTTCCCTCCACCACCCGTGCAATTCAAGAACAGGCTTCCTTGGA
AAGAGACAAGGGATTTGTCTTCATGTTATCCCTGCTGGCAGAGTTGGTTTTGTCAGAAAA
ACAATTGAGTGCAAGGAATCTAGAATTGGAAAGAAACCGATAGAAGTTCCATCAAATGTT
ACTCTTACATTAGAGGAGCAATTTATAAAAGCTAAGGGTCCATTGGGAGAGTTATCACTA
AACTATCCAGGTGAAGTAAAAGTGGTGAAAGAAGAATCTGGTAAGCTGAGAGTCTCCAAA
ACAGTGGAAACCAAAAGGGCAAACCAGATGCATGGACTTTTCAGGACCCTGACGGACAAC
ATCATCGTAGGGGTATCAAAAGGGTTTGACAAGAAGCTTCAGTTAGTTGGGGTCGGGTAC
CGTGCAGCTGTAGAAGGCAAAGATCTCGTGATGAATTTGGGATTCTCGCATCCTGTTCGG
ATGGCTGTTCCTGAAGGCCTGAAGGTTAAGGTGGAAGAGAACACCAGGATCATCGTGAGT
GGCTACGACAAGAGTGAGATTGGCCAGTTTGCTGCCTCCATAAAGAAGTGGAGGCCACCT
GAGCCGTACAAGGGGAAGGGAATCCGATACGCCGATGAGGTTGTCAGAAGAAAGGAGGGT
AAAGCTGGGAAAAAGAAGTAG

Peptide Sequence

PEP ID

Os03t0751400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30981065:30984498:1 gene:Os03g0751400 transcript:Os03t0751400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein l6. (Os03t0751400-01)
Sequence

MASLSLSLHHPCNSRTGFLGKRQGICLHVIPAGRVGFVRKTIECKESRIGKKPIEVPSNV
TLTLEEQFIKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDN
IIVGVSKGFDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVS
GYDKSEIGQFAASIKKWRPPEPYKGKGIRYADEVVRRKEGKAGKKK

Transcript Sequence

Transcript ID

Os03t0751400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30981065:30984498:1 gene:Os03g0751400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein l6. (Os03t0751400-01)
Sequence

AGCGATCGAGCGGGGGCGGCTCCTCCTGCGACGGCGAGGCGTCCATGGCGTCCCTCTCCC
TTTCCCTCCACCACCCGTGCAATTCAAGAACAGGCTTCCTTGGAAAGAGACAAGGGATTT
GTCTTCATGTTATCCCTGCTGGCAGAGTTGGTTTTGTCAGAAAAACAATTGAGTGCAAGG
AATCTAGAATTGGAAAGAAACCGATAGAAGTTCCATCAAATGTTACTCTTACATTAGAGG
AGCAATTTATAAAAGCTAAGGGTCCATTGGGAGAGTTATCACTAAACTATCCAGGTGAAG
TAAAAGTGGTGAAAGAAGAATCTGGTAAGCTGAGAGTCTCCAAAACAGTGGAAACCAAAA
GGGCAAACCAGATGCATGGACTTTTCAGGACCCTGACGGACAACATCATCGTAGGGGTAT
CAAAAGGGTTTGACAAGAAGCTTCAGTTAGTTGGGGTCGGGTACCGTGCAGCTGTAGAAG
GCAAAGATCTCGTGATGAATTTGGGATTCTCGCATCCTGTTCGGATGGCTGTTCCTGAAG
GCCTGAAGGTTAAGGTGGAAGAGAACACCAGGATCATCGTGAGTGGCTACGACAAGAGTG
AGATTGGCCAGTTTGCTGCCTCCATAAAGAAGTGGAGGCCACCTGAGCCGTACAAGGGGA
AGGGAATCCGATACGCCGATGAGGTTGTCAGAAGAAAGGAGGGTAAAGCTGGGAAAAAGA
AGTAGAAAAGCTCTTCTGCTTCATCATCGTTTCGTTCGGCTGGTATTATATATACTTCCT
TTTGGTTTTGATTTTTCCCCATGTGTAAGTGTAATCCATCTTTTACGAACAAAGAGAACA
AGCTTTTTGAATCATGTAATCTCTCACGGCTTGTCG