Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0749100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30835650:30838138:1 gene:Os03g0749100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-glucanase. (Os03t0749100-01)
Sequence

ATGCGTGCTGCACCGACGACGATGTGGCGTTCGCCGGCGGCGCCGGTGTGTCTCCTCGTC
GCCGCCGTTCTCCTGTCGGCGGTGGCGGCGGCGACGGCGGGGGAGGAGTACGTGAAGTAC
AAGGACCCAAAGAAGCCGATCGGCGAGCGCGTCGACGACCTCCTCAGCCGGATGACGCTC
GCGGAGAAGATCGGCCAGATGTCGCAGATCGAGCGCGCCAACGCGACCTCCGCCGTTATC
GAGAAGTACTTCGTCGGGAGCGTGCTGAGCGGCGGCGGGAGCGTGCCGTCGGAGAAGGCG
ACGGCGAAGGAGTGGCAGCAGATGGTGGCCAAGATGCAGAAGGCGGCGCTCAAGACGCGC
CTCGGCATCCCGATCATCTACGGCATCGACGCCGTGCACGGCCACAACAACGTCCACAAC
GCCACCATCTTCCCCCACAACGTCGGCCTCGGCGCCACCCGCGACCCCAAGCTCGTCAAG
CGGATCGGCCAGTCCACCGCCCACGAGGCCCGCGCCACCGGCATCCCCTACACCTTCGCC
CCATGCGTCGCCGTTTGCCGCGACCCGAGATGGGGACGGTGCTACGAGAGCTACAGCGAG
GACACGAAGCTGGTGCAGCTGATGACGTCGGCAATGGTGCCCGGGCTGCAGGGCGACGCG
CCGGCGAGGTACCCCAAGGGGACGCCGTTCGTGGCGGGGGGGATGAACGTGGCCGGCTGC
GCCAAGCACTTCGTCGGCGACGGCGGGACGCGGGACGGCATCAACGAGAACAACACGGTG
CTCAGCTTCCACGACCTGATGCGCATCCACATGCCGCCCTACGACGACGCCGTCATCAAG
GGCGTCGCCTCCGTCATGATCTCCTACTCCAGCTGGAACGGCGTCAAGATGCATGAGAAC
CGCTTCCTCATCACCGACATCCTCAAGAACAAGTTGAAATTCAGGGGATTTGTGATCACG
GACTGGCAAGCGGTGGACAGGATCACGACGCCGCCGCACAAGCACTACTACCACTCGATC
CAGGAGACGATCCACGCGGGCATTGACATGGTGATGATCCCGTACGACTACCCGGAGTTC
GTCGCCGACCTGACGACGCAGGTGTCGAACGGGTCGATCAAGCTGGACAGGATCAACGAC
GCCGTGAGCCGCATCCTCCGCGTCAAGTTCGCCATGGGCCTCTTCGAGAACCCGCTCCCG
GACCCGCGCCTCGCCGGCGAGCTCGGCGACAAGGAGCACCGGCAGATCGCGCGCGAGGCC
GTGCGCAGGTCGCTCGTCCTGCTCAAGAACGGCAAGCACGGGGAGAAGCCCGTGCTGCCG
CTGTCCAAGAAGGCCGACAAGATCCTCGTCGCCGGCAGCCACGCCCACAACCTCGGCTTC
CAGTGCGGCGGCTGGACCGTGTCCTGGCAAGGCCAGGGCGGCAACAACGTCACCGCCGGG
ACGACGATCCTGGAGGCGATCAAGGCGGCGGTGGACGAGAGCACGGTGATCGACTACACG
GAGCACCCGGACAAGAGCTCGATCGCCGAGAGCGCCAAGGAGTACGACTACGCGGTGGTG
GTGGTGGGGGAGGAGCCGTACGCGGAGACGGAGGGGGACAACCTGAACCTGACCATCCCG
TCGCCGGGGCCGAAGGTGATCAAGGACGTGTGCGGGCTCGTCAAGTGCGTGGTGGTGCTC
GTCTCCGGGCGTCCGCTCGTGGTGGAGCCGTACATCGGCGCCATGGACGCGTTCGTCGCC
GCCTGGCTCCCCGGCACGGAGGGCCACGGCGTCGCCGACGTGCTGTTCGGGGATCACGGC
TTCACCGGCAAGCTGCCACGTACTTGGTTCAAATCGGTGGACCAGCTGCCGATGAATTTC
GGCGACAAGCATTACAACCCGCTGTTCCCATTTGGGTTCGGACTAACCACCAAGCCAAGC
CATAGCCAAAGTTAG

Peptide Sequence

PEP ID

Os03t0749100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30835650:30838138:1 gene:Os03g0749100 transcript:Os03t0749100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-glucanase. (Os03t0749100-01)
Sequence

MRAAPTTMWRSPAAPVCLLVAAVLLSAVAAATAGEEYVKYKDPKKPIGERVDDLLSRMTL
AEKIGQMSQIERANATSAVIEKYFVGSVLSGGGSVPSEKATAKEWQQMVAKMQKAALKTR
LGIPIIYGIDAVHGHNNVHNATIFPHNVGLGATRDPKLVKRIGQSTAHEARATGIPYTFA
PCVAVCRDPRWGRCYESYSEDTKLVQLMTSAMVPGLQGDAPARYPKGTPFVAGGMNVAGC
AKHFVGDGGTRDGINENNTVLSFHDLMRIHMPPYDDAVIKGVASVMISYSSWNGVKMHEN
RFLITDILKNKLKFRGFVITDWQAVDRITTPPHKHYYHSIQETIHAGIDMVMIPYDYPEF
VADLTTQVSNGSIKLDRINDAVSRILRVKFAMGLFENPLPDPRLAGELGDKEHRQIAREA
VRRSLVLLKNGKHGEKPVLPLSKKADKILVAGSHAHNLGFQCGGWTVSWQGQGGNNVTAG
TTILEAIKAAVDESTVIDYTEHPDKSSIAESAKEYDYAVVVVGEEPYAETEGDNLNLTIP
SPGPKVIKDVCGLVKCVVVLVSGRPLVVEPYIGAMDAFVAAWLPGTEGHGVADVLFGDHG
FTGKLPRTWFKSVDQLPMNFGDKHYNPLFPFGFGLTTKPSHSQS

Transcript Sequence

Transcript ID

Os03t0749100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30835650:30838138:1 gene:Os03g0749100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-glucanase. (Os03t0749100-01)
Sequence

AATTAGCATCACCTCCCTCCTTGCTTATCAACACGTACGTTGCGTTTCTTGGCAATGCGT
GCTGCACCGACGACGATGTGGCGTTCGCCGGCGGCGCCGGTGTGTCTCCTCGTCGCCGCC
GTTCTCCTGTCGGCGGTGGCGGCGGCGACGGCGGGGGAGGAGTACGTGAAGTACAAGGAC
CCAAAGAAGCCGATCGGCGAGCGCGTCGACGACCTCCTCAGCCGGATGACGCTCGCGGAG
AAGATCGGCCAGATGTCGCAGATCGAGCGCGCCAACGCGACCTCCGCCGTTATCGAGAAG
TACTTCGTCGGGAGCGTGCTGAGCGGCGGCGGGAGCGTGCCGTCGGAGAAGGCGACGGCG
AAGGAGTGGCAGCAGATGGTGGCCAAGATGCAGAAGGCGGCGCTCAAGACGCGCCTCGGC
ATCCCGATCATCTACGGCATCGACGCCGTGCACGGCCACAACAACGTCCACAACGCCACC
ATCTTCCCCCACAACGTCGGCCTCGGCGCCACCCGCGACCCCAAGCTCGTCAAGCGGATC
GGCCAGTCCACCGCCCACGAGGCCCGCGCCACCGGCATCCCCTACACCTTCGCCCCATGC
GTCGCCGTTTGCCGCGACCCGAGATGGGGACGGTGCTACGAGAGCTACAGCGAGGACACG
AAGCTGGTGCAGCTGATGACGTCGGCAATGGTGCCCGGGCTGCAGGGCGACGCGCCGGCG
AGGTACCCCAAGGGGACGCCGTTCGTGGCGGGGGGGATGAACGTGGCCGGCTGCGCCAAG
CACTTCGTCGGCGACGGCGGGACGCGGGACGGCATCAACGAGAACAACACGGTGCTCAGC
TTCCACGACCTGATGCGCATCCACATGCCGCCCTACGACGACGCCGTCATCAAGGGCGTC
GCCTCCGTCATGATCTCCTACTCCAGCTGGAACGGCGTCAAGATGCATGAGAACCGCTTC
CTCATCACCGACATCCTCAAGAACAAGTTGAAATTCAGGGGATTTGTGATCACGGACTGG
CAAGCGGTGGACAGGATCACGACGCCGCCGCACAAGCACTACTACCACTCGATCCAGGAG
ACGATCCACGCGGGCATTGACATGGTGATGATCCCGTACGACTACCCGGAGTTCGTCGCC
GACCTGACGACGCAGGTGTCGAACGGGTCGATCAAGCTGGACAGGATCAACGACGCCGTG
AGCCGCATCCTCCGCGTCAAGTTCGCCATGGGCCTCTTCGAGAACCCGCTCCCGGACCCG
CGCCTCGCCGGCGAGCTCGGCGACAAGGAGCACCGGCAGATCGCGCGCGAGGCCGTGCGC
AGGTCGCTCGTCCTGCTCAAGAACGGCAAGCACGGGGAGAAGCCCGTGCTGCCGCTGTCC
AAGAAGGCCGACAAGATCCTCGTCGCCGGCAGCCACGCCCACAACCTCGGCTTCCAGTGC
GGCGGCTGGACCGTGTCCTGGCAAGGCCAGGGCGGCAACAACGTCACCGCCGGGACGACG
ATCCTGGAGGCGATCAAGGCGGCGGTGGACGAGAGCACGGTGATCGACTACACGGAGCAC
CCGGACAAGAGCTCGATCGCCGAGAGCGCCAAGGAGTACGACTACGCGGTGGTGGTGGTG
GGGGAGGAGCCGTACGCGGAGACGGAGGGGGACAACCTGAACCTGACCATCCCGTCGCCG
GGGCCGAAGGTGATCAAGGACGTGTGCGGGCTCGTCAAGTGCGTGGTGGTGCTCGTCTCC
GGGCGTCCGCTCGTGGTGGAGCCGTACATCGGCGCCATGGACGCGTTCGTCGCCGCCTGG
CTCCCCGGCACGGAGGGCCACGGCGTCGCCGACGTGCTGTTCGGGGATCACGGCTTCACC
GGCAAGCTGCCACGTACTTGGTTCAAATCGGTGGACCAGCTGCCGATGAATTTCGGCGAC
AAGCATTACAACCCGCTGTTCCCATTTGGGTTCGGACTAACCACCAAGCCAAGCCATAGC
CAAAGTTAGAGGTCAAAACATTTTATCTCAATGTGTAGCCAGAGCCGGAGTTAGGGGTTA
AACATTGCATCTGATGGACTATTATATTGTTCGGTTAAAAGTAAAATGAGTGTGAGGGTA
TGGTATTTTAAAAATAAATATTAGTAGGATTTTATTGGTGAGTGATTCTCGTACCATTTT
TTTTCTACA