Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0748300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30796483:30798275:-1 gene:Os03g0748300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase family protein. (Os03t0748300-01)
Sequence

ATGGCGTTCTGCACTCCTACTGCCACCACTCCTCCTCATGCCACTCCACCTCCTCTCACC
ACCTCATGGAAGCAGCTCGCCTTCTGCAACTCTTCCCGGCTAGCCGCCGCCGCCGCCGGC
GGCGGCCAGAGGGCGCGGCCGGCCGGTGCAAGTGTTGAGGCGCGCGCATTGGCGCCGGCG
TCGACGGCGGCAGACGCGGCGGCGGCTGCGGCGGCACCCGCCCCTCCCAACGTGGACTAC
CTGGCGGCGGAGTTCGCCGGCCACGGCGTCAGCTTCGAGGCCGTCGGCGGCAGCTGCGCC
GTCAAGATGGAGCTGCGCAACGGCAGCGCCGCGCACGTGCTGCTCCCGGGCGGCCTCGTC
ACGTCCTACAAGCCGGCCATGTGGCACGGCGCCCCCACCGAGGTGATCCACACCACCGTC
GCCGAGGGCCTCGGCGGCCGCGCCGTCATCCGCGGCGGCGTGTCGCTGGACCTCCGCTGC
GGCGGCGCCGCCGGCGGAGGCGGTGACGGGATGCCGCCGTGGTCGCCGAGCGGCGCATGG
TCGCTCCGCGACGTCAGGGGGAGCCCCACGGGCTCCATCGAGGTCGAGCTGGCCTCCGCC
GCGCCGCCGGAGGCGAGCGGCGTCGAGGCGAGGTGCGTCGTGACGCTGCACCCGGAGGCG
CTGGCGACGGAGTTCACGGCGAGGAACGCCGCCTCGCCGTCGCCGGTGGCTCTGTCCGCC
GCGGTGTCCACCCACCTCCGCGTGAGCACGCCGGACGCCACCTACGCCGTGGGGCTCCAG
GGCTCCGACTACCGCGCCATAGATCCCGTGCTCTCGGAGTTCGCCATCGTGCCCCCGGAC
TTCATGTCGCGGTCGTCGTCGGCGACGACGCTCGCGCGGCGCTGGGCCACCAAGGGGTTC
GACGCGGTCCTCTCCGGCGGCGGCGGCGGCGGCGCGGGGGCGCAAGAGGCCGACGGCGAG
GAGGACGACGACTACAAGCGGATGACCGAGGAGATGTGCCGCATCTACAGCCACGCCCCC
CGCCAATTCACCATCATCGACAGGGGGAGGAGGAACTCCATTTGCGTGCAGCGGAGAGGG
TTCGAGGAGGTGTACGTGTTCAGCCCGGGGTCAAAGTACCAGTGGTACGGGAAGTACGCC
TACGTGTGCGTGGGGCCCGCCATGCTGGAGCCCATCGTGCTGTCACCTGGGGCCACATGG
TCAGGGGCTCAGTACCTGCGCAACCCAAACCTCTAG

Peptide Sequence

PEP ID

Os03t0748300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30796483:30798275:-1 gene:Os03g0748300 transcript:Os03t0748300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase family protein. (Os03t0748300-01)
Sequence

MAFCTPTATTPPHATPPPLTTSWKQLAFCNSSRLAAAAAGGGQRARPAGASVEARALAPA
STAADAAAAAAAPAPPNVDYLAAEFAGHGVSFEAVGGSCAVKMELRNGSAAHVLLPGGLV
TSYKPAMWHGAPTEVIHTTVAEGLGGRAVIRGGVSLDLRCGGAAGGGGDGMPPWSPSGAW
SLRDVRGSPTGSIEVELASAAPPEASGVEARCVVTLHPEALATEFTARNAASPSPVALSA
AVSTHLRVSTPDATYAVGLQGSDYRAIDPVLSEFAIVPPDFMSRSSSATTLARRWATKGF
DAVLSGGGGGGAGAQEADGEEDDDYKRMTEEMCRIYSHAPRQFTIIDRGRRNSICVQRRG
FEEVYVFSPGSKYQWYGKYAYVCVGPAMLEPIVLSPGATWSGAQYLRNPNL

Transcript Sequence

Transcript ID

Os03t0748300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30796483:30798275:-1 gene:Os03g0748300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase family protein. (Os03t0748300-01)
Sequence

ACAGATAGAGAGAACTTGCAGTCTTTCAGATAAGGCTACACTGCCACTCGACCAATTCTT
GCAAGAATTGGCCATGGCGTTCTGCACTCCTACTGCCACCACTCCTCCTCATGCCACTCC
ACCTCCTCTCACCACCTCATGGAAGCAGCTCGCCTTCTGCAACTCTTCCCGGCTAGCCGC
CGCCGCCGCCGGCGGCGGCCAGAGGGCGCGGCCGGCCGGTGCAAGTGTTGAGGCGCGCGC
ATTGGCGCCGGCGTCGACGGCGGCAGACGCGGCGGCGGCTGCGGCGGCACCCGCCCCTCC
CAACGTGGACTACCTGGCGGCGGAGTTCGCCGGCCACGGCGTCAGCTTCGAGGCCGTCGG
CGGCAGCTGCGCCGTCAAGATGGAGCTGCGCAACGGCAGCGCCGCGCACGTGCTGCTCCC
GGGCGGCCTCGTCACGTCCTACAAGCCGGCCATGTGGCACGGCGCCCCCACCGAGGTGAT
CCACACCACCGTCGCCGAGGGCCTCGGCGGCCGCGCCGTCATCCGCGGCGGCGTGTCGCT
GGACCTCCGCTGCGGCGGCGCCGCCGGCGGAGGCGGTGACGGGATGCCGCCGTGGTCGCC
GAGCGGCGCATGGTCGCTCCGCGACGTCAGGGGGAGCCCCACGGGCTCCATCGAGGTCGA
GCTGGCCTCCGCCGCGCCGCCGGAGGCGAGCGGCGTCGAGGCGAGGTGCGTCGTGACGCT
GCACCCGGAGGCGCTGGCGACGGAGTTCACGGCGAGGAACGCCGCCTCGCCGTCGCCGGT
GGCTCTGTCCGCCGCGGTGTCCACCCACCTCCGCGTGAGCACGCCGGACGCCACCTACGC
CGTGGGGCTCCAGGGCTCCGACTACCGCGCCATAGATCCCGTGCTCTCGGAGTTCGCCAT
CGTGCCCCCGGACTTCATGTCGCGGTCGTCGTCGGCGACGACGCTCGCGCGGCGCTGGGC
CACCAAGGGGTTCGACGCGGTCCTCTCCGGCGGCGGCGGCGGCGGCGCGGGGGCGCAAGA
GGCCGACGGCGAGGAGGACGACGACTACAAGCGGATGACCGAGGAGATGTGCCGCATCTA
CAGCCACGCCCCCCGCCAATTCACCATCATCGACAGGGGGAGGAGGAACTCCATTTGCGT
GCAGCGGAGAGGGTTCGAGGAGGTGTACGTGTTCAGCCCGGGGTCAAAGTACCAGTGGTA
CGGGAAGTACGCCTACGTGTGCGTGGGGCCCGCCATGCTGGAGCCCATCGTGCTGTCACC
TGGGGCCACATGGTCAGGGGCTCAGTACCTGCGCAACCCAAACCTCTAGATAGACAAGAC
AAGACAGGCTAGCTGGCGACTCAATGCTGCTGGGGAACAAAACAATGGTCATTGTACATG
TTGGCTCACAATAAGCAAGAAAAACATGTGAAACAATATATATATGTTTGCAAATGTGTT
TCACTG