Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0748100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30788424:30789445:1 gene:Os03g0748100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Short-chain type dehydrogenase/reductase (EC 1.-.-.-). (Os03t0748100-01)
Sequence

ATGGAGGCGTCGTCGAACACCAACGCCATGGCCGGCGTGATGGCGCCGCTGATGCTGCAC
GGCCGCGTGGCAATTGTCACCGGCGGCGCCGGCGGCATCGGGTCGGCCGTGTCGAGGCAC
CTGGCGTCCCTCGGCGCGCGCGTCGCGGTCGCCTACATCGGGGACCCCGCGCCGGCGAAC
GAGCTGGTGAGCGGCATCAACGACGGCTACTTGCGCGCGGAGGAGGAAGAGAAGCGCGGG
CCGCGGGCCATCGCGGTGGAGGCGGACGTGTCGGACGCGGCGCGGGTGAGGGCGCTGTTC
GACGCGGCGGCGGCGGCGTTCGGCGGCGAGATCCACATCCTGGTGACGACGGCGGCCGTG
CTGGACTTCGCGTACCCGGCGCTGGCGGAGACGAGCGAGGCAGCGTACGACGCCATGTTC
GGCGTGAACGCGCGCGGCACCTTCCTGTGCTGCCGCGAGGCCGCGAACCGGCTGGCGCGC
GGCGGCCGGGGGCGCATCGTGACGTTCTCGTCGTCGGGCGTCGGGTCGCTCCGGCCGGGG
TACGCGGCGTACGCGGCGAGCAAGGCGGCGGTGGAGGTGATGACCAAGATCCTGGCGCGC
GAGCTGCGCGGCACGGGGATCACGGCGAACGCAGTGGCGCCCGGGTCCACGGGCACGCCG
ATGATGTACACCGGCAAGACAGAGGAGGACATGGCGCGGTACATCGCCGAGGCGCCGCTG
GGCCGCCTCGGCATGCCCGACGACATCGCGCCGCTCGTCGGCTTCCTCGCCAGCGACGCC
GGCGGCTGGATCAACGCCCAGGTCATCCGCTGCAACGGCGGCACTATCTAG

Peptide Sequence

PEP ID

Os03t0748100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30788424:30789445:1 gene:Os03g0748100 transcript:Os03t0748100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Short-chain type dehydrogenase/reductase (EC 1.-.-.-). (Os03t0748100-01)
Sequence

MEASSNTNAMAGVMAPLMLHGRVAIVTGGAGGIGSAVSRHLASLGARVAVAYIGDPAPAN
ELVSGINDGYLRAEEEEKRGPRAIAVEADVSDAARVRALFDAAAAAFGGEIHILVTTAAV
LDFAYPALAETSEAAYDAMFGVNARGTFLCCREAANRLARGGRGRIVTFSSSGVGSLRPG
YAAYAASKAAVEVMTKILARELRGTGITANAVAPGSTGTPMMYTGKTEEDMARYIAEAPL
GRLGMPDDIAPLVGFLASDAGGWINAQVIRCNGGTI

Transcript Sequence

Transcript ID

Os03t0748100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30788424:30789445:1 gene:Os03g0748100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Short-chain type dehydrogenase/reductase (EC 1.-.-.-). (Os03t0748100-01)
Sequence

GTGAGCTATACACACTGACAGTGTAGTGTGCTGCTCTCCTAGCTAGCTAGAGAACGCCAC
ACACTGGACTGGACTGGATGGAGGCGTCGTCGAACACCAACGCCATGGCCGGCGTGATGG
CGCCGCTGATGCTGCACGGCCGCGTGGCAATTGTCACCGGCGGCGCCGGCGGCATCGGGT
CGGCCGTGTCGAGGCACCTGGCGTCCCTCGGCGCGCGCGTCGCGGTCGCCTACATCGGGG
ACCCCGCGCCGGCGAACGAGCTGGTGAGCGGCATCAACGACGGCTACTTGCGCGCGGAGG
AGGAAGAGAAGCGCGGGCCGCGGGCCATCGCGGTGGAGGCGGACGTGTCGGACGCGGCGC
GGGTGAGGGCGCTGTTCGACGCGGCGGCGGCGGCGTTCGGCGGCGAGATCCACATCCTGG
TGACGACGGCGGCCGTGCTGGACTTCGCGTACCCGGCGCTGGCGGAGACGAGCGAGGCAG
CGTACGACGCCATGTTCGGCGTGAACGCGCGCGGCACCTTCCTGTGCTGCCGCGAGGCCG
CGAACCGGCTGGCGCGCGGCGGCCGGGGGCGCATCGTGACGTTCTCGTCGTCGGGCGTCG
GGTCGCTCCGGCCGGGGTACGCGGCGTACGCGGCGAGCAAGGCGGCGGTGGAGGTGATGA
CCAAGATCCTGGCGCGCGAGCTGCGCGGCACGGGGATCACGGCGAACGCAGTGGCGCCCG
GGTCCACGGGCACGCCGATGATGTACACCGGCAAGACAGAGGAGGACATGGCGCGGTACA
TCGCCGAGGCGCCGCTGGGCCGCCTCGGCATGCCCGACGACATCGCGCCGCTCGTCGGCT
TCCTCGCCAGCGACGCCGGCGGCTGGATCAACGCCCAGGTCATCCGCTGCAACGGCGGCA
CTATCTAGCTACCCTGGCCTGCGCGCCAAAATAAATGATTTCTCCGTTCTAAAATATAAC
AACCTAAAATAAAAAAGATATATCATGTACTAAAAATTTAAACGTAAGATTTATAATATT
AG