Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0746800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30701249:30704661:-1 gene:Os03g0746800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-92 description:WD-40 repeat containing protein. (Os03t0746800-01)
Sequence

ATGGAGGACGCCGCGGTCGAGGAGGCCGAGGTGAGCGGCGGCGCGGCGGAGTTCGCGCCG
GCTCTCGTCGCCGCCCACCCGCTCGGCCGCTCCGTCGCCGTCGCCGTCGGGCCCGAGCTC
CGCGTGTTCGATCTCAAGGCCAGCAGTGCAGTTTCATTGTCAGACAATTCTGGCGGTGGT
TCTCATTCGGATGCTATAAGAGCTATCTCGTTTAGTGCAAACGGTGCTCTGTTCGCATCC
GCTGGTGATGACAAGCTTGTTAAGGTCTGGAAGACTGATTCATGGTGCTGCATTCGGACC
ATAACTTCTGAAAAGAGGGTCAGTGCAGTTGCTATTAGCAATGATGGCACATATGTAACT
TTTGCAGATAAATTTGGTGTTATTTGGTTAGTTACCATGGGGGAAAGTGGTGGAGAGCAG
GAGCCAACTGATAATAAACCTGTGTCAATTTTTGGTCACTACTGCAGTATTATTACTAGC
ATGAAATTCTCACCGGATGGACGATTCATTGCTACAGCTGACCGGGACTTTAAAATCCGA
ATTACATCACTCCCGAAAAAGCCTTTAAGAGGGGCTCATGAGATTCAAAGTTTTTGCCTA
GGACATACAGACTTTGTATCGTGCATTGCCTTCACATGCCTTTCAGAAGGTCCGAGCTTT
CTTTTGTCTGGAGGCGGTGATTCTACTGTTCGTCTATGGGACTACATAAACGGCTGCCTC
CTTGATACATGTCAAGTCCGAGACAAGGTGGGAGAACTCTTAGAGCCAAATGAAACTGAA
GACAACAATCTATCTGTTGCAGATATATGCCCGACTAATGATGGTTTGTTGGTTGCTGTA
GCCATTCAGAGTTTAAATGGAGTAATGCTTTTAGCATGTGACCTTATTGCAAAGAAGTTA
TCTTTTCTAAAGGTGGTTACAACGGAAAAGTGCTATATTCCTACTAGCCTGTCTTCCAGC
TTCTCAGCAGATCTTCTATGGACCGTCATGGGCGCATCGAATATGCCTAATCAGGCTACT
TCCCAGTTATGTACCCGTTTGAAAATCATCCCACACTTCAAAAAGGATCCGCTAGCCGGA
TGTGATCATGTTCCTACAGTCTTGGAAGACAGTGAGGTGCCACATGGTGAGAAGCTCCTT
CTGGCGCTGCAAGGAAGTCTTGACATTGCAAAGCAAGAAGAGGTGTTAGCTTCAGTTCTA
GCTGCACTGAAAGTATCAATGCACAAGATGCTGGTAAAGAAGCACTACTCGGAGGAAAGG
AGAGAGCAGAGGAAAAGGGGCAGAAACGATAAGAAGATCAAGAAGTAG

Peptide Sequence

PEP ID

Os03t0746800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30701249:30704661:-1 gene:Os03g0746800 transcript:Os03t0746800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-92 description:WD-40 repeat containing protein. (Os03t0746800-01)
Sequence

MEDAAVEEAEVSGGAAEFAPALVAAHPLGRSVAVAVGPELRVFDLKASSAVSLSDNSGGG
SHSDAIRAISFSANGALFASAGDDKLVKVWKTDSWCCIRTITSEKRVSAVAISNDGTYVT
FADKFGVIWLVTMGESGGEQEPTDNKPVSIFGHYCSIITSMKFSPDGRFIATADRDFKIR
ITSLPKKPLRGAHEIQSFCLGHTDFVSCIAFTCLSEGPSFLLSGGGDSTVRLWDYINGCL
LDTCQVRDKVGELLEPNETEDNNLSVADICPTNDGLLVAVAIQSLNGVMLLACDLIAKKL
SFLKVVTTEKCYIPTSLSSSFSADLLWTVMGASNMPNQATSQLCTRLKIIPHFKKDPLAG
CDHVPTVLEDSEVPHGEKLLLALQGSLDIAKQEEVLASVLAALKVSMHKMLVKKHYSEER
REQRKRGRNDKKIKK

Transcript Sequence

Transcript ID

Os03t0746800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30701249:30704661:-1 gene:Os03g0746800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-92 description:WD-40 repeat containing protein. (Os03t0746800-01)
Sequence

CCCCGCCTCCCTCCCATCTCGCGTTCTCGCGCTCGATTCGAATCCCACCGCAAAGCAAAA
GCCCACGCGCGAAGCAAAAGCTCGCCGCAAATGGAGGACGCCGCGGTCGAGGAGGCCGAG
GTGAGCGGCGGCGCGGCGGAGTTCGCGCCGGCTCTCGTCGCCGCCCACCCGCTCGGCCGC
TCCGTCGCCGTCGCCGTCGGGCCCGAGCTCCGCGTGTTCGATCTCAAGGCCAGCAGTGCA
GTTTCATTGTCAGACAATTCTGGCGGTGGTTCTCATTCGGATGCTATAAGAGCTATCTCG
TTTAGTGCAAACGGTGCTCTGTTCGCATCCGCTGGTGATGACAAGCTTGTTAAGGTCTGG
AAGACTGATTCATGGTGCTGCATTCGGACCATAACTTCTGAAAAGAGGGTCAGTGCAGTT
GCTATTAGCAATGATGGCACATATGTAACTTTTGCAGATAAATTTGGTGTTATTTGGTTA
GTTACCATGGGGGAAAGTGGTGGAGAGCAGGAGCCAACTGATAATAAACCTGTGTCAATT
TTTGGTCACTACTGCAGTATTATTACTAGCATGAAATTCTCACCGGATGGACGATTCATT
GCTACAGCTGACCGGGACTTTAAAATCCGAATTACATCACTCCCGAAAAAGCCTTTAAGA
GGGGCTCATGAGATTCAAAGTTTTTGCCTAGGACATACAGACTTTGTATCGTGCATTGCC
TTCACATGCCTTTCAGAAGGTCCGAGCTTTCTTTTGTCTGGAGGCGGTGATTCTACTGTT
CGTCTATGGGACTACATAAACGGCTGCCTCCTTGATACATGTCAAGTCCGAGACAAGGTG
GGAGAACTCTTAGAGCCAAATGAAACTGAAGACAACAATCTATCTGTTGCAGATATATGC
CCGACTAATGATGGTTTGTTGGTTGCTGTAGCCATTCAGAGTTTAAATGGAGTAATGCTT
TTAGCATGTGACCTTATTGCAAAGAAGTTATCTTTTCTAAAGGTGGTTACAACGGAAAAG
TGCTATATTCCTACTAGCCTGTCTTCCAGCTTCTCAGCAGATCTTCTATGGACCGTCATG
GGCGCATCGAATATGCCTAATCAGGCTACTTCCCAGTTATGTACCCGTTTGAAAATCATC
CCACACTTCAAAAAGGATCCGCTAGCCGGATGTGATCATGTTCCTACAGTCTTGGAAGAC
AGTGAGGTGCCACATGGTGAGAAGCTCCTTCTGGCGCTGCAAGGAAGTCTTGACATTGCA
AAGCAAGAAGAGGTGTTAGCTTCAGTTCTAGCTGCACTGAAAGTATCAATGCACAAGATG
CTGGTAAAGAAGCACTACTCGGAGGAAAGGAGAGAGCAGAGGAAAAGGGGCAGAAACGAT
AAGAAGATCAAGAAGTAGATCGGCCTACAGCCTCAGCAAAACCAGTTCTTTGTTTCTCAT
TGTACCATTAGAGGCTTGGAAAACAAAAGGCATTTTGACATTCACAACTGTAAGATTAAA
TCTACTAGCAAACACTTTTCTCATTATCCATAGGCCACAGCATAACGGCTTCTGAATTCT
GATGCCTGTTGTTTCAGTCGAAATGCCCGCAGTTCTTGTTGTCTGCTCTACCTGTAGCAG
CTGTTATCTGTGATTTGAAATGTTACTTACCCTATATTAACCATGCTGCTATCCAATGAT
AATTGCACGCTATAATATCATTTTTGC