Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0746500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:30679685:30689225:-1 gene:Os03g0746500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUV3 helicase, suppressor of Var 3 description:NTP-dependent DNA/RNA helicase, Salinity stress tolerance (Os03t0746500-01);Similar to predicted protein. (Os03t0746500-02)
Sequence	ATGGCGGTGGCTGCGGCGCTGCTGCGCCGGAGGGCGCTCTATTCGGCCCTCGCGTCGCCC TCTTGGCTCCATGATACCAGTTCCTGCTACATTTGCTCCATTTCTGGTACACATTCTTTG GTCAACCATCCCAATTTGAGATTACAGAGGGGCTACCACAACTCTGGGAAGTTTGATTTG ACCGACTTGACCCATCCTCATATATGGTATCCGAATGCCCGAGAAAAGAAGCGCAATGTA TTTTTACATGTCGGTCCTACAAATAGTGGGAAGACACATAATGCTCTCAAGAGACTAGAA GCAAGTTCTTCAGGAGTATACTGTGGACCTCTTAGATTGTTGGCACGGGAGGTAGCTCAA AGACTAAACAAAGCTAATGTCCCTTGTAACTTAATTACTGGACAAGAAAGGGAGGAAATT GAAGGTGCAAAGCATAGCTCAGTGACAGTTGAGATGGCCGACATGACAACTGAGTATCAA TGTGCCGTTATTGATGAAATTCAGATGGTTGGCTGTAGATCGAGGGGTTTTTCATTCACT CGTGCACTTCTGGGGCTTTGTTCAGATGAGCTTCATGTTTGTGGTGACCCAGCTGTGGTT CCTCTCATTCAGCGAATTCTCGAACCTACTGGTGATGTGGTTACGGTCCAATATTATGAG AGGCTATCTCCATTGGTTCCTCTGAAGACTACTCTCGGGTCTTTCTCTAACATTAAGGCA GGGGATTGCGTTGTAACGTTCTCACGACGATCTATCTATATGCTTAAGAGAAGAATTGAA ATGGGGGGTAAGCATCTTTGTTCTGTAGTCTATGGCTCATTGCCACCAGAAACTCGAACA AAACAGGCGACAATGTTCAATGATCAAGATAGTAACCTTAATGTGTTAGTGGCTAGTGAT GCTATTGGAATGGGTCTTAATCTGAACATTTCTAGAATCATTTTCTCTACACTGGAGAAG TTTGATGGCATCTGCAACAGGGAACTAACTGTGGCCGAAATCAAACAGATTGCTGGAAGG GCTGGGAGATATGGATCTAAATTCCCAGTTGGTGAAGTGACCTGTCTAAATTCTGATCAT CTTCCATTACTACACTCTGCTCTGAAATCACCTTCTCCCATTATAGAGCGCGCTGGACTT TTCCCCACATTCGATGTATTATCTCTGTACTCACGATTGCATGGAACTGATTTTTTTCAA CCTATATTGGAGCGTTTCTTGGACAAGGCTAAACTATCTCCAGACTATTTCATTGCTGAT TGTGAAGATATGCTGAAAGTTGCTGCTATTGTTGATGAGCTACCACTTGGACTATATGAT AAATACCTCTTCTGTCTCAGTCCTGTGGACATTCGTGATGATATATCTACTAAAGGATTA ATTCAGTTTGCAGAAAATTATGCAAAGAAAGGTATTGTTCGACTCAAAGAGATATTTACA CCTGGGACACTCCAAGTGCCTAAATCGCACAATCAACTGAAGGAGCTTGAATCGATTCAC AAGGTGCTAGAGTTGTATGTGTGGTTGAGCTTCAGATTGGAGGATTCCTATCCAGACCGT GAATTGGCAGCTTCCCAAAAGTCAATCTGTAGCATGTTGATTGAAGAATATCTGGAAAGG TCCGGCTGGCAGCAAAATGGACGAAAGGACTTTTTGCAGAAGCCAAAAAGACTACACCAA GAATATGATGCATCACAATTGCGCAAATATTTTCAAGAAATTGATGTGAGATCAAAATAA

Peptide Sequence

PEP ID	Os03t0746500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:30679685:30689225:-1 gene:Os03g0746500 transcript:Os03t0746500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUV3 helicase, suppressor of Var 3 description:NTP-dependent DNA/RNA helicase, Salinity stress tolerance (Os03t0746500-01);Similar to predicted protein. (Os03t0746500-02)
Sequence	MAVAAALLRRRALYSALASPSWLHDTSSCYICSISGTHSLVNHPNLRLQRGYHNSGKFDL TDLTHPHIWYPNAREKKRNVFLHVGPTNSGKTHNALKRLEASSSGVYCGPLRLLAREVAQ RLNKANVPCNLITGQEREEIEGAKHSSVTVEMADMTTEYQCAVIDEIQMVGCRSRGFSFT RALLGLCSDELHVCGDPAVVPLIQRILEPTGDVVTVQYYERLSPLVPLKTTLGSFSNIKA GDCVVTFSRRSIYMLKRRIEMGGKHLCSVVYGSLPPETRTKQATMFNDQDSNLNVLVASD AIGMGLNLNISRIIFSTLEKFDGICNRELTVAEIKQIAGRAGRYGSKFPVGEVTCLNSDH LPLLHSALKSPSPIIERAGLFPTFDVLSLYSRLHGTDFFQPILERFLDKAKLSPDYFIAD CEDMLKVAAIVDELPLGLYDKYLFCLSPVDIRDDISTKGLIQFAENYAKKGIVRLKEIFT PGTLQVPKSHNQLKELESIHKVLELYVWLSFRLEDSYPDRELAASQKSICSMLIEEYLER SGWQQNGRKDFLQKPKRLHQEYDASQLRKYFQEIDVRSK

Transcript Sequence

Transcript ID	Os03t0746500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:30679685:30689225:-1 gene:Os03g0746500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUV3 helicase, suppressor of Var 3 description:NTP-dependent DNA/RNA helicase, Salinity stress tolerance (Os03t0746500-01);Similar to predicted protein. (Os03t0746500-02)
Sequence	CCTCCGCTTCCTCCGCCGCCTCGGCGCGAAGGCCATCGCCGGATTCCCCGCTTCCTCCGC CTGGATTGCTCCGCACGCAATCGGCCCTGGTTTCTTCCCGGCGGCGTGGTCGTCGCTGTT CCCCACCCGCCGCCGGCGCCGCCGCAGCCGGCGTCTGAGTTGAGGGAGGAGGGAGGAACG GCGGCGCAATGGCGGTGGCTGCGGCGCTGCTGCGCCGGAGGGCGCTCTATTCGGCCCTCG CGTCGCCCTCTTGGCTCCATGATACCAGTTCCTGCTACATTTGCTCCATTTCTGGTACAC ATTCTTTGGTCAACCATCCCAATTTGAGATTACAGAGGGGCTACCACAACTCTGGGAAGT TTGATTTGACCGACTTGACCCATCCTCATATATGGTATCCGAATGCCCGAGAAAAGAAGC GCAATGTATTTTTACATGTCGGTCCTACAAATAGTGGGAAGACACATAATGCTCTCAAGA GACTAGAAGCAAGTTCTTCAGGAGTATACTGTGGACCTCTTAGATTGTTGGCACGGGAGG TAGCTCAAAGACTAAACAAAGCTAATGTCCCTTGTAACTTAATTACTGGACAAGAAAGGG AGGAAATTGAAGGTGCAAAGCATAGCTCAGTGACAGTTGAGATGGCCGACATGACAACTG AGTATCAATGTGCCGTTATTGATGAAATTCAGATGGTTGGCTGTAGATCGAGGGGTTTTT CATTCACTCGTGCACTTCTGGGGCTTTGTTCAGATGAGCTTCATGTTTGTGGTGACCCAG CTGTGGTTCCTCTCATTCAGCGAATTCTCGAACCTACTGGTGATGTGGTTACGGTCCAAT ATTATGAGAGGCTATCTCCATTGGTTCCTCTGAAGACTACTCTCGGGTCTTTCTCTAACA TTAAGGCAGGGGATTGCGTTGTAACGTTCTCACGACGATCTATCTATATGCTTAAGAGAA GAATTGAAATGGGGGGTAAGCATCTTTGTTCTGTAGTCTATGGCTCATTGCCACCAGAAA CTCGAACAAAACAGGCGACAATGTTCAATGATCAAGATAGTAACCTTAATGTGTTAGTGG CTAGTGATGCTATTGGAATGGGTCTTAATCTGAACATTTCTAGAATCATTTTCTCTACAC TGGAGAAGTTTGATGGCATCTGCAACAGGGAACTAACTGTGGCCGAAATCAAACAGATTG CTGGAAGGGCTGGGAGATATGGATCTAAATTCCCAGTTGGTGAAGTGACCTGTCTAAATT CTGATCATCTTCCATTACTACACTCTGCTCTGAAATCACCTTCTCCCATTATAGAGCGCG CTGGACTTTTCCCCACATTCGATGTATTATCTCTGTACTCACGATTGCATGGAACTGATT TTTTTCAACCTATATTGGAGCGTTTCTTGGACAAGGCTAAACTATCTCCAGACTATTTCA TTGCTGATTGTGAAGATATGCTGAAAGTTGCTGCTATTGTTGATGAGCTACCACTTGGAC TATATGATAAATACCTCTTCTGTCTCAGTCCTGTGGACATTCGTGATGATATATCTACTA AAGGATTAATTCAGTTTGCAGAAAATTATGCAAAGAAAGGTATTGTTCGACTCAAAGAGA TATTTACACCTGGGACACTCCAAGTGCCTAAATCGCACAATCAACTGAAGGAGCTTGAAT CGATTCACAAGGTGCTAGAGTTGTATGTGTGGTTGAGCTTCAGATTGGAGGATTCCTATC CAGACCGTGAATTGGCAGCTTCCCAAAAGTCAATCTGTAGCATGTTGATTGAAGAATATC TGGAAAGGTCCGGCTGGCAGCAAAATGGACGAAAGGACTTTTTGCAGAAGCCAAAAAGAC TACACCAAGAATATGATGCATCACAATTGCGCAAATATTTTCAAGAAATTGATGTGAGAT CAAAATAAGATGCTTATGCTAGAAAGTCGCCTCACAATATCTGCTTCCGGACAACGGATT TGCTCCTGTTTGCATACGTTATGGTCGAGGAGAGGCGACAAGCCGACAATACATTTTATG GATGACAGGAGTCAAAAGAATATCCTTTGCCGACAATACATTTTATGGATGACAGGAGTC AAAAGAATCATCCTTTGCCAAAACCATTTAATTGGCCTAAGCAGTAAATGTGGCAGCACC TGTCCTCCATCCAAACAATTTTGTAGCTATTCTTTCATTACACTTTATTTTAATTATTTC TAACACAGATGGAGCTGTACATCACGATGAAACGTCTAAATGTTCGTTAAAGTTATTAAC ATAGACAGGACGAAGCCACCTGTAAACTTTGCGGTTGTAACTCTTTGTGTTATGAAAGGT GTAAATATGTCAAAATGACAGTTGTCAAGTGATGTTTCTTGGGCAGCTAAACACCTGATT TGTGCATGCC