Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0746400-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:30676843:30678494:1 gene:Os03g0746400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0746400-01);Hypothetical conserved gene. (Os03t0746400-02)
Sequence	ATGCGCCGGTGCGGCCGAATTTTTTTCCCTCCGTCTCTCAAGTTCGTGTCTCATAGCGGC GGCAGGCTCTCCGCGACACGCTTCTCTACCACCGGGTTCGACCTCCCCGACTGGTTCAGG AACCCCAAGGACGATGGCTCATGCGCCGGCTTGGATGACGAGGAGGACGACATTTTTGTG CTCCCGACTGAACCCAACGTCTCGGATGAGCGAAGAAGCCAGAGCAGCACCTCCAGGTCG CTGTCGATCCGCCCTGGCTTTCCTGCAACTGCCTCCCATGAGGATGCTGAGTTCGAGGCC GACATCGATGAGGTCAGCAGGATCCTTAGTGCTCGTTTCGCGTCTCCTGAGGCCATTATG ATAGCCATGGACTGCTGCTCTGTAAGGGTCACTGGCTGCCTTGTTGACAAGATCCTGACG AGGTTCAGCAATGATTGGGTGGCGGCATTCGGGTTCTTCATGTGGGTTGGCACTCAGGGA GGGTACTGCCATTGTGCCGATTCATATGACTTGATGGTAGATATACTGGGGAAGTTCAAG CAGTTTGATCTGATGTGGGGTTTGATCAATCAGATGGTTGAGGTTGGAGGCTTGATGTCG CTCATGACGATGACAAAGGTGATGAGAAGGCTTGCTGGGGCAAGTCGATGGACCGAGGCC ATCGACGCCTTCCATAAGATGGATCGGTTTGGAGTTGTGAAGGATACAAAGGCCATGAAT GTGCTCCTGGACACACTGTGCAAGGAGAGGAGCGTGAAGCGCGCAAGAGGCGTCTTCCAA GAGCTGAGGGGAACAATACCTCCAGACGAGAACAGCTTCAATACTCTCGTGCATGGTTGG TGTAAGGCAAGGATGCTGAAGGAAGCTCTAGACACAATGGAGGAGATGAAGCAGCATGGA TTCAGTCCTTCAGTGGTGACTTATACCAGCCTGGTAGAAGCATACTGCATGGAGAAAGAT TTTCAGACTGTTTACGCTCTCTTGGACGAGATGCGCAAGAGGCGGTGTCCCCCAAATGTT GTTACATATACCATTTTGATGCATGCACTGGGGAAGGCTGGGAGAACGCGAGAAGCTTTG GATACCTTTGACAAGTTG

Peptide Sequence

PEP ID	Os03t0746400-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:30676843:30678494:1 gene:Os03g0746400 transcript:Os03t0746400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0746400-01);Hypothetical conserved gene. (Os03t0746400-02)
Sequence	MRRCGRIFFPPSLKFVSHSGGRLSATRFSTTGFDLPDWFRNPKDDGSCAGLDDEEDDIFV LPTEPNVSDERRSQSSTSRSLSIRPGFPATASHEDAEFEADIDEVSRILSARFASPEAIM IAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFK QFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMN VLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHG FSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREAL DTFDKL

Transcript Sequence

Transcript ID	Os03t0746400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:30676843:30678494:1 gene:Os03g0746400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0746400-01);Hypothetical conserved gene. (Os03t0746400-02)
Sequence	GTCCGCCTCCGGTGAGCTGAGCTCCGGCGAGGCGAGGTCGGAGATCCCACCGCCGTGTCG CCGCCGCCTCCAAGTTCTCCTTCCTCCCTCGCCTCTTCGCGCCGGCGAGGTCCCACCTTC GCCTTCCCGGATCGGCGCCGGTGAGGTCCGGCGACATATCGCGTCCCCGTGCATCCATCT ACTCGGCCGGCGACCGCGCGCCCCTTCGCCGTCGTCTTATGCGCTTCCCACGGGGCCGCA CGATCCGGACATGGGCGCGTTTGGGCGAAGACGCCGCCTATTCGCGGTTCGCGCCCCCCT CCTCTCCCGCTTCGTTTCTCCCCAATCTCCACCTCCACCTTCTGCGCGCGCCGCTGCCAT TCACACGCATCGAGTAAGCTCGATCTCATCACCTCCCGAGCTGTAGTCTTTGCCCGCACT TGAGGTCGCGCCGGCCGCCGGGGCGGCAGAGAGAGAGAGAGAGAGAGAGAGGATTCAGAG AGGTGTTGTTTGGCCGCGCACGAGAGGTGTTCGACGATTTGCCCACCTGGTCTCCTCCAA GCCAGAGAGAGGTTATGCGCCGGTGCGGCCGAATTTTTTTCCCTCCGTCTCTCAAGTTCG TGTCTCATAGCGGCGGCAGGCTCTCCGCGACACGCTTCTCTACCACCGGGTTCGACCTCC CCGACTGGTTCAGGAACCCCAAGGACGATGGCTCATGCGCCGGCTTGGATGACGAGGAGG ACGACATTTTTGTGCTCCCGACTGAACCCAACGTCTCGGATGAGCGAAGAAGCCAGAGCA GCACCTCCAGGTCGCTGTCGATCCGCCCTGGCTTTCCTGCAACTGCCTCCCATGAGGATG CTGAGTTCGAGGCCGACATCGATGAGGTCAGCAGGATCCTTAGTGCTCGTTTCGCGTCTC CTGAGGCCATTATGATAGCCATGGACTGCTGCTCTGTAAGGGTCACTGGCTGCCTTGTTG ACAAGATCCTGACGAGGTTCAGCAATGATTGGGTGGCGGCATTCGGGTTCTTCATGTGGG TTGGCACTCAGGGAGGGTACTGCCATTGTGCCGATTCATATGACTTGATGGTAGATATAC TGGGGAAGTTCAAGCAGTTTGATCTGATGTGGGGTTTGATCAATCAGATGGTTGAGGTTG GAGGCTTGATGTCGCTCATGACGATGACAAAGGTGATGAGAAGGCTTGCTGGGGCAAGTC GATGGACCGAGGCCATCGACGCCTTCCATAAGATGGATCGGTTTGGAGTTGTGAAGGATA CAAAGGCCATGAATGTGCTCCTGGACACACTGTGCAAGGAGAGGAGCGTGAAGCGCGCAA GAGGCGTCTTCCAAGAGCTGAGGGGAACAATACCTCCAGACGAGAACAGCTTCAATACTC TCGTGCATGGTTGGTGTAAGGCAAGGATGCTGAAGGAAGCTCTAGACACAATGGAGGAGA TGAAGCAGCATGGATTCAGTCCTTCAGTGGTGACTTATACCAGCCTGGTAGAAGCATACT GCATGGAGAAAGATTTTCAGACTGTTTACGCTCTCTTGGACGAGATGCGCAAGAGGCGGT GTCCCCCAAATGTTGTTACATATACCATTTTGATGCATGCACTGGGGAAGGCTGGGAGAA CGCGAGAAGCTTTGGATACCTTTGACAAGTTG