Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0745600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30639024:30640119:1 gene:Os03g0745600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os03t0745600-01)
Sequence

ATGTATTTCCGGCCGCCGCCGAAGGGGCCCGAGTGGGCGGGGGGAGATGCGGAGGCGGGG
ATGGCGAGGCCGCTGTACCCGATGATGCTGGAGAGCCCGCAGCTGCGGTGGGCGTTCGTC
CGGAAGGTGTACGCCATCCTCTCCATCCAGATGCTGCTCACCATCGCCGTCGCCTCCGTC
GTCGTCTTCGTCCGCCCCGTCGCCCTCTTCTTCGTCTCCACCCCCGCCGGCTTCGCCCTC
TACATCTTCCTCATCATCCTCCCCTTCATCGTGCTTTGCCCGCTCTACTACTACTACCAG
CGCCACCCGGTGAACCTCCTCCTGCTGGCCCTCTTCACGGCGGCGATCAGCTTCGCCGTG
GGCCTCACCTGCGCGTTCACCAAGGGCGAGGTGATCCTCGAGTCGGCGATCCTGACGGCC
GCGGTGGTGGTGAGCCTGACGGCGTACACGTTCTGGGCGGCGCGGCGCGGCCACGACTTC
AGCTTCCTCGGCCCGTTCCTCTTCGCCGCCGTCATGATCCTCATGGTGTTCGCGCTCATC
CAGGTCTTCTTCCCGCTCGGGAGGGTCTCGCTGATGATCTACGGTGGCCTCGCCGCGCTC
GTGTTCTGCGGCTACATCGTGTACGACACGGATAACCTCATCAAGAGGTACTCCTACGAC
GAGTATGTCTGGGCCGCCGTCGCGCTCTACCTCGACGTCATCAACCTCTTCCTCTCCCTC
CTCACCCTCTTCAGGGCATCCGATTCGTAG

Peptide Sequence

PEP ID

Os03t0745600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30639024:30640119:1 gene:Os03g0745600 transcript:Os03t0745600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os03t0745600-01)
Sequence

MYFRPPPKGPEWAGGDAEAGMARPLYPMMLESPQLRWAFVRKVYAILSIQMLLTIAVASV
VVFVRPVALFFVSTPAGFALYIFLIILPFIVLCPLYYYYQRHPVNLLLLALFTAAISFAV
GLTCAFTKGEVILESAILTAAVVVSLTAYTFWAARRGHDFSFLGPFLFAAVMILMVFALI
QVFFPLGRVSLMIYGGLAALVFCGYIVYDTDNLIKRYSYDEYVWAAVALYLDVINLFLSL
LTLFRASDS

Transcript Sequence

Transcript ID

Os03t0745600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30639024:30640119:1 gene:Os03g0745600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os03t0745600-01)
Sequence

AGCCATCGCCACCGCGCAAGCGCAGAGAGCAGAGAGGAGGATCAGATCGGAGAAGCCAAG
AAACCTCACCGGCGCGAGGAAGAGGAGCGAGAGAGGATGTATTTCCGGCCGCCGCCGAAG
GGGCCCGAGTGGGCGGGGGGAGATGCGGAGGCGGGGATGGCGAGGCCGCTGTACCCGATG
ATGCTGGAGAGCCCGCAGCTGCGGTGGGCGTTCGTCCGGAAGGTGTACGCCATCCTCTCC
ATCCAGATGCTGCTCACCATCGCCGTCGCCTCCGTCGTCGTCTTCGTCCGCCCCGTCGCC
CTCTTCTTCGTCTCCACCCCCGCCGGCTTCGCCCTCTACATCTTCCTCATCATCCTCCCC
TTCATCGTGCTTTGCCCGCTCTACTACTACTACCAGCGCCACCCGGTGAACCTCCTCCTG
CTGGCCCTCTTCACGGCGGCGATCAGCTTCGCCGTGGGCCTCACCTGCGCGTTCACCAAG
GGCGAGGTGATCCTCGAGTCGGCGATCCTGACGGCCGCGGTGGTGGTGAGCCTGACGGCG
TACACGTTCTGGGCGGCGCGGCGCGGCCACGACTTCAGCTTCCTCGGCCCGTTCCTCTTC
GCCGCCGTCATGATCCTCATGGTGTTCGCGCTCATCCAGGTCTTCTTCCCGCTCGGGAGG
GTCTCGCTGATGATCTACGGTGGCCTCGCCGCGCTCGTGTTCTGCGGCTACATCGTGTAC
GACACGGATAACCTCATCAAGAGGTACTCCTACGACGAGTATGTCTGGGCCGCCGTCGCG
CTCTACCTCGACGTCATCAACCTCTTCCTCTCCCTCCTCACCCTCTTCAGGGCATCCGAT
TCGTAGATTGCTTGTGTATCTAAAGCTTCTTGGATGAGAGATTTCTGTTGTTGTGCTTTG
CTTGTGCCCGCTTGACTAATTAACCTGTAAAATAAGTAATCGCTGATATGATTTTTGTTT
GTGTTGTAATTTGCCTTCGATGAAATGATAGATTTGCTC