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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0744800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30596446:30599523:-1 gene:Os03g0744800 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os03t0744800-01);Similar to emp24/gp25L/p24 protein-related. (Os03t0744800-02)
Sequence

ATGGCGGTGGGGTGGCGGCCGGCGATGCTGGTGGTGGTGGTGGCGGTGGCGGCGTGGCGC
GGGGAGGCGCTGTCGGTGACGGTGACCGACACGGAGTGCATCCACGAGTTCGTGCCCTAC
GAGGGGGACACCGTGTCGGGGAACTTCGTCGTCGTCGACCACGACATCTTCTGGAGCTCC
GACCACCCCGGCATCGACCTCACGGTAACTTCACCAGGTGGCAACACTGTGTATACATTG
AAGGGGAAGTCTGGTGACAAATTTGAATTTAAAGCTCCAAGGGGTGGAATGTACAAGTTC
TGCTTCCATAATCCATATGGAGCACCTGAAACCGTTTCTTTCTACATTCATGTTGGGCAC
ATACCCAACGAGCACAATCTGGCAAAAGATGAGCACTTGGACCCTATCAATGTGAAAATA
GCGGAGCTGAAGGAAGCATTAGAATCTGTCACTGCTGAGCAGAAATACCTTAAAGCCCGT
GAAGCTCGTCACCGACACACAAATGAGAGCACAAGAAGGCGTGTCATGTTCTACACAATA
GCGGAGTACCTAGCTTTCATGGGTGCAAGCGCTTTGCAAGTTGTTTACATCCGTCGCCTA
TTCAGCAAAAACGTGGCATACAACAGGGTGTAG

Peptide Sequence

PEP ID

Os03t0744800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30596446:30599523:-1 gene:Os03g0744800 transcript:Os03t0744800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os03t0744800-01);Similar to emp24/gp25L/p24 protein-related. (Os03t0744800-02)
Sequence

MAVGWRPAMLVVVVAVAAWRGEALSVTVTDTECIHEFVPYEGDTVSGNFVVVDHDIFWSS
DHPGIDLTVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPYGAPETVSFYIHVGH
IPNEHNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTI
AEYLAFMGASALQVVYIRRLFSKNVAYNRV

Transcript Sequence

Transcript ID

Os03t0744800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30596446:30599523:-1 gene:Os03g0744800 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os03t0744800-01);Similar to emp24/gp25L/p24 protein-related. (Os03t0744800-02)
Sequence

AATCTAGCCCGTGACCTCCTCGCCGGGGCTACTTCTCCATCGCCATCGACCTCGACCTCG
CCGCCTCCTCCTCCTCCTCCTCCCCGTGCGAACTCCGGGCTCGTGCCGAGGGGGTGGACG
CGCCGGTGGTGAGAGCGGACGCGGTGCGGTGGGCCATGGCGGTGGGGTGGCGGCCGGCGA
TGCTGGTGGTGGTGGTGGCGGTGGCGGCGTGGCGCGGGGAGGCGCTGTCGGTGACGGTGA
CCGACACGGAGTGCATCCACGAGTTCGTGCCCTACGAGGGGGACACCGTGTCGGGGAACT
TCGTCGTCGTCGACCACGACATCTTCTGGAGCTCCGACCACCCCGGCATCGACCTCACGG
TAACTTCACCAGGTGGCAACACTGTGTATACATTGAAGGGGAAGTCTGGTGACAAATTTG
AATTTAAAGCTCCAAGGGGTGGAATGTACAAGTTCTGCTTCCATAATCCATATGGAGCAC
CTGAAACCGTTTCTTTCTACATTCATGTTGGGCACATACCCAACGAGCACAATCTGGCAA
AAGATGAGCACTTGGACCCTATCAATGTGAAAATAGCGGAGCTGAAGGAAGCATTAGAAT
CTGTCACTGCTGAGCAGAAATACCTTAAAGCCCGTGAAGCTCGTCACCGACACACAAATG
AGAGCACAAGAAGGCGTGTCATGTTCTACACAATAGCGGAGTACCTAGCTTTCATGGGTG
CAAGCGCTTTGCAAGTTGTTTACATCCGTCGCCTATTCAGCAAAAACGTGGCATACAACA
GGGTGTAGAACAGAGTCTACTTCAAGGCAGCAGAAAATGGTTGGAGCAGGAAAAAAATAT
TTCCAACATATTGTGTTAGCTTTTGCAGCCATTTTTTTTGGGTTTAGTCTAAAACGTGGC
ACTTTTAAATTTATTGCCTTGTACTTTAGAACTTCAGTGAGATATGAAGCACATTTGTTG
CTGAACAAGTGAACACAGATCCGTAACTAATCTTCAAAGGGTTGATGTCTCAAAGCACCA
CTTGTGTTATTGTGTTAATATGACTTATGAGGGTCTTCGTTCTGATATAAATTGATCAAA
TTTT