Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0742900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30480796:30483289:-1 gene:Os03g0742900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA13 description:Aux /IAA protein. (Os03t0742900-01);Similar to cDNA clone:006-206-C11, full insert sequence. (Os03t0742900-03)
Sequence

ATGGCCGGCGCCGACGTGGACGTCGGGACGGAGCTCCGGCTGGGGCTGCCCGGAGGTGGC
GGCGGCGCCGCCGAGGCGGCGGCCAAGGCCGCGAAGAGGGGCTTCGAGGAGACCATTGAC
CTGAAGCTGAAGCTGCCCACCGCCGGCATGGAGGAGGCCGCCGCCGGCAAGGCGGAGGCG
CCGGCCGCCGAGAAGGCCAAGAGGCCGGCGGAGGCCGCCGCCGCCGACGCCGAGAAGCCA
CCTGCTCCCAAGGCGCAGGCAGTGGGTTGGCCACCAGTTCGGTCGTTCCGCAGGAACATC
ATGACCGTCCAGTCAGTGAAGAGCAAGAAGGAAGAGGAAGCTGACAAGCAGCAGCAGCAG
CCCGCTGCCAATGCCAGCGGCAGCAACAGCTCTGCCTTCGTGAAGGTCAGCATGGACGGG
GCACCCTACCTGCGCAAGGTGGACCTGAAGATGTACAACAGCTACAAGGACCTCTCCCTT
GCTCTGCAGAAGATGTTCGGCACCTTCACCGCAACTGGGAACAATATGAATGAGGTGAAT
GGCTCTGATGCTGTTACAACTTATGAAGACAAGGATGGTGACTGGATGCTTGTTGGAGAT
GTCCCGTGGCAGATGTTTGTCGAGTCATGCAAACGCTTGAGGATCATGAAGGGTTCCGAA
GCCATTGGTCTTGCACCAAGAGCAAAGGACAAGTACAAGAACAAGAGCTGA

Peptide Sequence

PEP ID

Os03t0742900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30480796:30483289:-1 gene:Os03g0742900 transcript:Os03t0742900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA13 description:Aux /IAA protein. (Os03t0742900-01);Similar to cDNA clone:006-206-C11, full insert sequence. (Os03t0742900-03)
Sequence

MAGADVDVGTELRLGLPGGGGGAAEAAAKAAKRGFEETIDLKLKLPTAGMEEAAAGKAEA
PAAEKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQ
PAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEVN
GSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS

Transcript Sequence

Transcript ID

Os03t0742900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30480796:30483289:-1 gene:Os03g0742900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA13 description:Aux /IAA protein. (Os03t0742900-01);Similar to cDNA clone:006-206-C11, full insert sequence. (Os03t0742900-03)
Sequence

GGCTCCTCTCTCTTCTTCCAACACCTCCTAATCACCACAAAGGCTTAAAAATCTCCAGTC
TCCATAGAGAGAAAGAGAGAGAAGAGAAGGCAGCTTGATTTGGGGCGAGGAGACGCGATA
GCCGCGATAGGCTAAGCAGCTGGCAGCGGCGGCTGCTGCGATGGCCGGCGCCGACGTGGA
CGTCGGGACGGAGCTCCGGCTGGGGCTGCCCGGAGGTGGCGGCGGCGCCGCCGAGGCGGC
GGCCAAGGCCGCGAAGAGGGGCTTCGAGGAGACCATTGACCTGAAGCTGAAGCTGCCCAC
CGCCGGCATGGAGGAGGCCGCCGCCGGCAAGGCGGAGGCGCCGGCCGCCGAGAAGGCCAA
GAGGCCGGCGGAGGCCGCCGCCGCCGACGCCGAGAAGCCACCTGCTCCCAAGGCGCAGGC
AGTGGGTTGGCCACCAGTTCGGTCGTTCCGCAGGAACATCATGACCGTCCAGTCAGTGAA
GAGCAAGAAGGAAGAGGAAGCTGACAAGCAGCAGCAGCAGCCCGCTGCCAATGCCAGCGG
CAGCAACAGCTCTGCCTTCGTGAAGGTCAGCATGGACGGGGCACCCTACCTGCGCAAGGT
GGACCTGAAGATGTACAACAGCTACAAGGACCTCTCCCTTGCTCTGCAGAAGATGTTCGG
CACCTTCACCGCAACTGGGAACAATATGAATGAGGTGAATGGCTCTGATGCTGTTACAAC
TTATGAAGACAAGGATGGTGACTGGATGCTTGTTGGAGATGTCCCGTGGCAGATGTTTGT
CGAGTCATGCAAACGCTTGAGGATCATGAAGGGTTCCGAAGCCATTGGTCTTGCACCAAG
AGCAAAGGACAAGTACAAGAACAAGAGCTGAAAATGTTGCAGTATTAAGATGCTGAGCAT
GGTGCCATAAGAATGGTGTTCTTGCAGTGTGTTATGGTTTCCTTAGAAATATAAGGTTTT
ACTTGTTTAGCTGGATTAAAAGAAGGAAGAGTTGTCATGTTTAATTTGTTTATGGACCAG
AAGCAATAATCTATTTGTGTGTAGCTGGATTGGTGTTATGTGATGTCCCCTACCGTGTGT
CCCAAGATC