Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0741100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30406830:30409342:1 gene:Os03g0741100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 148 description:Basic helix-loop-helix transcription factor, Drought tolerance (Os03t0741100-01)
Sequence

ATGCAAATGGAGTCGTACTACGGCGCGTTCCACGCCGACGAGGCCGCGTTCTTCTTCCCC
CACCACGTGCCGGCGTCGCCGGAGCTGCCGTTCGGCCTCATTGCGTCGCCGGAGCCGGAG
CCGGAGCCGGAGCAGGCGGCGGCGGAGGCGAGGCAGAGCGCGTTCCAGGAGTACGGCGGC
GCGGTGCACGCCGGAGCGCCGGCGGCGGCGGGGGCTGTCACCACCGGTGGGACGAACATC
CACCGGAGGGTGATGGACGTGCTGGGCAGGATGGGCGGCGGCGGCGGCGGGGGGGAGAAG
GGGGAGGGTGAGGAGATGGAGGAGGAGGAGGAGGTGCCGCAGCGGCGGCGGCGCGGGCAG
GGCGCCGACGTGGAGAGCAGCCGCGGTTTCCGCCACATGATGCGCGAGCGCCAGCGCCGC
GAGAAGCTCAGCCAGAGCTACGCCGACCTCTACGCCATGGTCTCCTCTCGCTCCAAGGGG
GACAAGAACTCGATCGTGCAGTCGGCGGCGATCTACATCCACGAGCTGAAGGTCGCGAGG
GACCAGCTGCAGAGGAGGAACGAGGAGCTGAAGGCCCAGATCATGGGCCACGACGAGCAG
CAGCCGTGCGTCACGGTGCAGTTCGAGGTCGACGAGCCGTCGTCGTCGATCGACTCCATG
ATCGCCGCGCTCCGGCGGCTCAAGGGCATGAGCGTCAAGGCGCGCGGGATCCGGTCGAGC
ATGTCCGGGAACAGGCTGTGGACGGAGATGAACGTCGAGACCACGATTGCGGCTTGTGAA
GTGGAAAAGGCAGTGGAAGAGGCTCTCAAGGAAGTAGAGAGGAACCAGCCTGACAGCGAT
GCCCCATTTCCTGGAAGCAAAGGCTGGACACAGACATCTCATGTGCAAAATGTGTTTTGA

Peptide Sequence

PEP ID

Os03t0741100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30406830:30409342:1 gene:Os03g0741100 transcript:Os03t0741100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 148 description:Basic helix-loop-helix transcription factor, Drought tolerance (Os03t0741100-01)
Sequence

MQMESYYGAFHADEAAFFFPHHVPASPELPFGLIASPEPEPEPEQAAAEARQSAFQEYGG
AVHAGAPAAAGAVTTGGTNIHRRVMDVLGRMGGGGGGGEKGEGEEMEEEEEVPQRRRRGQ
GADVESSRGFRHMMRERQRREKLSQSYADLYAMVSSRSKGDKNSIVQSAAIYIHELKVAR
DQLQRRNEELKAQIMGHDEQQPCVTVQFEVDEPSSSIDSMIAALRRLKGMSVKARGIRSS
MSGNRLWTEMNVETTIAACEVEKAVEEALKEVERNQPDSDAPFPGSKGWTQTSHVQNVF

Transcript Sequence

Transcript ID

Os03t0741100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30406830:30409342:1 gene:Os03g0741100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 148 description:Basic helix-loop-helix transcription factor, Drought tolerance (Os03t0741100-01)
Sequence

GGAAACCATCGCCAACCATCACATCTGATCGAGAACAAGAAGAAGAAGAAGAAGAAGCAA
GAACAGCAAGAGGAAGAGATGCAAATGGAGTCGTACTACGGCGCGTTCCACGCCGACGAG
GCCGCGTTCTTCTTCCCCCACCACGTGCCGGCGTCGCCGGAGCTGCCGTTCGGCCTCATT
GCGTCGCCGGAGCCGGAGCCGGAGCCGGAGCAGGCGGCGGCGGAGGCGAGGCAGAGCGCG
TTCCAGGAGTACGGCGGCGCGGTGCACGCCGGAGCGCCGGCGGCGGCGGGGGCTGTCACC
ACCGGTGGGACGAACATCCACCGGAGGGTGATGGACGTGCTGGGCAGGATGGGCGGCGGC
GGCGGCGGGGGGGAGAAGGGGGAGGGTGAGGAGATGGAGGAGGAGGAGGAGGTGCCGCAG
CGGCGGCGGCGCGGGCAGGGCGCCGACGTGGAGAGCAGCCGCGGTTTCCGCCACATGATG
CGCGAGCGCCAGCGCCGCGAGAAGCTCAGCCAGAGCTACGCCGACCTCTACGCCATGGTC
TCCTCTCGCTCCAAGGGGGACAAGAACTCGATCGTGCAGTCGGCGGCGATCTACATCCAC
GAGCTGAAGGTCGCGAGGGACCAGCTGCAGAGGAGGAACGAGGAGCTGAAGGCCCAGATC
ATGGGCCACGACGAGCAGCAGCCGTGCGTCACGGTGCAGTTCGAGGTCGACGAGCCGTCG
TCGTCGATCGACTCCATGATCGCCGCGCTCCGGCGGCTCAAGGGCATGAGCGTCAAGGCG
CGCGGGATCCGGTCGAGCATGTCCGGGAACAGGCTGTGGACGGAGATGAACGTCGAGACC
ACGATTGCGGCTTGTGAAGTGGAAAAGGCAGTGGAAGAGGCTCTCAAGGAAGTAGAGAGG
AACCAGCCTGACAGCGATGCCCCATTTCCTGGAAGCAAAGGCTGGACACAGACATCTCAT
GTGCAAAATGTGTTTTGATCGGTTTTGAAACATGATCCTGCTGGGACCCCCATTTGTTCA
TTTTTTTAAAAGCTTGTGATGGAGCAAGTGGAAAAAAAATCTCCATATCTCCTTGTCAAT
GTACCTTTTTTTTGTCCATGTAGATACAATCATACAAATAATAGCTTCCTCTCTTTTCTA
CAAGGAAAAAAGAAAGAGAAGAGTACAAAAAAGATTTAAGC