Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0738600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:30315456:30318959:1 gene:Os03g0738600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE L2 description:Lipoxygenase, Seed germination and longevity (Os03t0738600-01)
Sequence	ATGTTGGGCGGGATCATCGGCGGCCTGACGGGCAACAAGAACGCCCGCCTCAAGGGCTCC CTCGTCCTCATGCGCAAGAACGCCCTCGACATCAACGACTTCGGCGCCACCGTCATCGAC GGCATCTCCGAGTTCCTCGGCCGCGGCGTCACCTGCCAGCTCGTCAGCTCCTCCCTCGTC GACCCCAACAATGGGAACAGGGGGAGGGTGGGGACGGAGGCGAGCCTGGAGCAGTGGCTG ACGAGCCTGCCGTCGCTGACGACGGGAGAGTCCAAGTTCGGGGTGACGTTCGAGTGGGAG GTGGAGAAGATGGGCATACCCGGCGCCATCATCGTCAAGAACAACCACGCCGCCGAGTTC TTCCTCAAGACCATCACCCTCGACAACGTCCCCGGCCACGGCGCCGTCGTCTTCGTCGCC AACTCCTGGATCTACCCCGCCTCCAAGTATCGCTACAACCGCGTCTTCTTCTCCAACGAC ACTTCACTGCCGAGCAAGATGCCGGCGGCGCTGAAGCCGTACCGCGACGACGAGCTCCGC AACCTGCGCGGCGACGACCAGCAGGGCCCGTACCAGGAGCACGACCGCGTCTACCGCTAC GACGTCTACAACGACCTCGGCGAGCCCGACTCCGGCAACCCTCGCCCTGTCCTCGGCGGC TCCCCCGACCGCCCCTACCCTCGCCGCGGCCGCACCGGCCGCAAACCCACCAAAACTGAC CCCACCGCGGAGAGCAGGCTGTCATTGCTGGAGAACATCTACGTGCCACGCGACGAGCGG TTCGGGCACCTGAAGATGGCCGACTTCCTGGGCTACTCCATCAAGGCGCTCGTCGACGGC ATCGTGCCGGCGATCCGCACCTACGTCGACCTCACACCCGGCGAGTTCGACTCCTTCAAG GACATCCTCAAGCTCTACGAGGGCGGCCTCAAGCTGCCCAGCATCCCGGCGCTGGAGGAG CTCCGCAAGCGCTTCCCTCTCCAGCTCGTCAAGGACCTCATCCCCGCCGGCGGCGACTAC CTCCTCAAGCTCCCCATGCCGCACGTCATCCGGGAGGACAAGAAGGCGTGGATGACCGAC GACGAGTTCGCCCGCGAGATCCTCGCCGGCGTCAACCCCATGGTCATCGCCCGCCTCACC GAGTTCCCGCCGCGGAGCCGCCTCGACCCGGCCAGGTACGGCGACCAGACGAGCACCATC ACGGCGGCGCACGTCGAGCGCGGGCTCGAGGGGCTCACCGTGCAGCAGGCGATCGACGGC AACCTTCTCTACGTGGTGGACCACCACGATCATTTCATGCCCTACTTGTTGGATATCAAT AGCCTCGACGACAACTTCATCTACGCCACGCGGACGCTGCTGTTCCTGCGCGGCGACGGC ACGCTGGCGCCGCTCGCCATCGAGCTGAGCTTGCCGCACCTGCAGGACGACGGGCTGATC ACCGCCAGGAGCACCGTGTACACGCCGGCGGCGCGCGGCGGCACCGGCGCCGGCGCCGTG GAGTGGTGGGTGTGGCAGCTCGCCAAGGCGTACGTCAACGTGAACGACTACTGCTGGCAC CAGCTGATCAGCCACTGGCTCAACACGCACGCCGTGATGGAGCCCTTCGTCATCGCCACC AACCGGCAGCTCAGCGTGGCGCACCCGGTGCACAAGCTGCTGCTGCCGCACTACCGCGAC ACCATGACCATCAACGCGCTGGCGCGGCAGACGCTCATCAACGGCGGCGGCATCTTCGAG ATGACCGTGTTCCCGCGGAAGCACGCGCTCGCCATGTCGTCGGCGTTCTACAAGGACTGG AGCTTCGCCGACCAGGCGCTCCCCGACGACCTTGTCAAGCGCGGCGTCGCGGTGCCGGAC CCGGCGAGCCCGTACAAGGTGCGGCTGCTCATCGAGGACTACCCGTACGCCAACGACGGG CTGGCCGTCTGGCACGCCATCGAGCAGTGGGCCACCGAGTACCTCGCCATCTACTACCCC AACGACGGCGTGCTCCAGGGCGACGCCGAGCTGCAGGCGTGGTGGAAGGAGGTCCGCGAG GTCGGGCATGGCGACATCAAGGACGCGACGTGGTGGCCGGAGATGAAGACGGTGGCGGAG CTGGTCAAGGCGTGCGCCACCATCATCTGGATCGGGTCCGCGCTGCACGCCGCCGTCAAC TTCGGGCAGTACCCGTACGCCGGGTACCTCCCGAACCGTCCGTCGGTGAGCCGGCGGCCG ATGCCGGAGCCGGGAACGAAGGAGTACGACGAGCTGGCGCGCGATCCGGAGAAGGTGTTC GTCCGGACAATCACCAAGCAGATGCAGGCCATCGTGGGGATCTCGCTGCTGGAGATCCTG TCCAAGCACTCCTCCGACGAGGTGTACCTCGGACAGCGCGACACGCCGGAGTGGACGTCG GACGCCAAGGCGCTGGAGGCGTTCAAGCGGTTCGGCGCGCGGCTGACGGAGATCGAGAGC CGCGTCGTCGCCATGAACAAGGACCCCCACCGCAAGAACCGTGTCGGGCCGACCAATTTC CCCTACACGCTGCTCTACCCAAACACCTCCGACCTCAAGGGCGACGCTGCCGGCCTCTCC GCCAGGGGCATCCCCAACAGCATCTCCATCTGA

Peptide Sequence

PEP ID	Os03t0738600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:30315456:30318959:1 gene:Os03g0738600 transcript:Os03t0738600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE L2 description:Lipoxygenase, Seed germination and longevity (Os03t0738600-01)
Sequence	MLGGIIGGLTGNKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV DPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHAAEF FLKTITLDNVPGHGAVVFVANSWIYPASKYRYNRVFFSNDTSLPSKMPAALKPYRDDELR NLRGDDQQGPYQEHDRVYRYDVYNDLGEPDSGNPRPVLGGSPDRPYPRRGRTGRKPTKTD PTAESRLSLLENIYVPRDERFGHLKMADFLGYSIKALVDGIVPAIRTYVDLTPGEFDSFK DILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVIREDKKAWMTD DEFAREILAGVNPMVIARLTEFPPRSRLDPARYGDQTSTITAAHVERGLEGLTVQQAIDG NLLYVVDHHDHFMPYLLDINSLDDNFIYATRTLLFLRGDGTLAPLAIELSLPHLQDDGLI TARSTVYTPAARGGTGAGAVEWWVWQLAKAYVNVNDYCWHQLISHWLNTHAVMEPFVIAT NRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPRKHALAMSSAFYKDW SFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYLAIYYP NDGVLQGDAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACATIIWIGSALHAAVN FGQYPYAGYLPNRPSVSRRPMPEPGTKEYDELARDPEKVFVRTITKQMQAIVGISLLEIL SKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNF PYTLLYPNTSDLKGDAAGLSARGIPNSISI

Transcript Sequence

Transcript ID	Os03t0738600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:30315456:30318959:1 gene:Os03g0738600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE L2 description:Lipoxygenase, Seed germination and longevity (Os03t0738600-01)
Sequence	ACACACACTCATATCCACTACTACTACTAGCTACCGAGCACTGAGCACTGCACTCTGCTG CTCTAGAACTGAAGCTTTGCATTGGTTGGTTAGTGAGAGATTAATTATTCCAAGATGTTG GGCGGGATCATCGGCGGCCTGACGGGCAACAAGAACGCCCGCCTCAAGGGCTCCCTCGTC CTCATGCGCAAGAACGCCCTCGACATCAACGACTTCGGCGCCACCGTCATCGACGGCATC TCCGAGTTCCTCGGCCGCGGCGTCACCTGCCAGCTCGTCAGCTCCTCCCTCGTCGACCCC AACAATGGGAACAGGGGGAGGGTGGGGACGGAGGCGAGCCTGGAGCAGTGGCTGACGAGC CTGCCGTCGCTGACGACGGGAGAGTCCAAGTTCGGGGTGACGTTCGAGTGGGAGGTGGAG AAGATGGGCATACCCGGCGCCATCATCGTCAAGAACAACCACGCCGCCGAGTTCTTCCTC AAGACCATCACCCTCGACAACGTCCCCGGCCACGGCGCCGTCGTCTTCGTCGCCAACTCC TGGATCTACCCCGCCTCCAAGTATCGCTACAACCGCGTCTTCTTCTCCAACGACACTTCA CTGCCGAGCAAGATGCCGGCGGCGCTGAAGCCGTACCGCGACGACGAGCTCCGCAACCTG CGCGGCGACGACCAGCAGGGCCCGTACCAGGAGCACGACCGCGTCTACCGCTACGACGTC TACAACGACCTCGGCGAGCCCGACTCCGGCAACCCTCGCCCTGTCCTCGGCGGCTCCCCC GACCGCCCCTACCCTCGCCGCGGCCGCACCGGCCGCAAACCCACCAAAACTGACCCCACC GCGGAGAGCAGGCTGTCATTGCTGGAGAACATCTACGTGCCACGCGACGAGCGGTTCGGG CACCTGAAGATGGCCGACTTCCTGGGCTACTCCATCAAGGCGCTCGTCGACGGCATCGTG CCGGCGATCCGCACCTACGTCGACCTCACACCCGGCGAGTTCGACTCCTTCAAGGACATC CTCAAGCTCTACGAGGGCGGCCTCAAGCTGCCCAGCATCCCGGCGCTGGAGGAGCTCCGC AAGCGCTTCCCTCTCCAGCTCGTCAAGGACCTCATCCCCGCCGGCGGCGACTACCTCCTC AAGCTCCCCATGCCGCACGTCATCCGGGAGGACAAGAAGGCGTGGATGACCGACGACGAG TTCGCCCGCGAGATCCTCGCCGGCGTCAACCCCATGGTCATCGCCCGCCTCACCGAGTTC CCGCCGCGGAGCCGCCTCGACCCGGCCAGGTACGGCGACCAGACGAGCACCATCACGGCG GCGCACGTCGAGCGCGGGCTCGAGGGGCTCACCGTGCAGCAGGCGATCGACGGCAACCTT CTCTACGTGGTGGACCACCACGATCATTTCATGCCCTACTTGTTGGATATCAATAGCCTC GACGACAACTTCATCTACGCCACGCGGACGCTGCTGTTCCTGCGCGGCGACGGCACGCTG GCGCCGCTCGCCATCGAGCTGAGCTTGCCGCACCTGCAGGACGACGGGCTGATCACCGCC AGGAGCACCGTGTACACGCCGGCGGCGCGCGGCGGCACCGGCGCCGGCGCCGTGGAGTGG TGGGTGTGGCAGCTCGCCAAGGCGTACGTCAACGTGAACGACTACTGCTGGCACCAGCTG ATCAGCCACTGGCTCAACACGCACGCCGTGATGGAGCCCTTCGTCATCGCCACCAACCGG CAGCTCAGCGTGGCGCACCCGGTGCACAAGCTGCTGCTGCCGCACTACCGCGACACCATG ACCATCAACGCGCTGGCGCGGCAGACGCTCATCAACGGCGGCGGCATCTTCGAGATGACC GTGTTCCCGCGGAAGCACGCGCTCGCCATGTCGTCGGCGTTCTACAAGGACTGGAGCTTC GCCGACCAGGCGCTCCCCGACGACCTTGTCAAGCGCGGCGTCGCGGTGCCGGACCCGGCG AGCCCGTACAAGGTGCGGCTGCTCATCGAGGACTACCCGTACGCCAACGACGGGCTGGCC GTCTGGCACGCCATCGAGCAGTGGGCCACCGAGTACCTCGCCATCTACTACCCCAACGAC GGCGTGCTCCAGGGCGACGCCGAGCTGCAGGCGTGGTGGAAGGAGGTCCGCGAGGTCGGG CATGGCGACATCAAGGACGCGACGTGGTGGCCGGAGATGAAGACGGTGGCGGAGCTGGTC AAGGCGTGCGCCACCATCATCTGGATCGGGTCCGCGCTGCACGCCGCCGTCAACTTCGGG CAGTACCCGTACGCCGGGTACCTCCCGAACCGTCCGTCGGTGAGCCGGCGGCCGATGCCG GAGCCGGGAACGAAGGAGTACGACGAGCTGGCGCGCGATCCGGAGAAGGTGTTCGTCCGG ACAATCACCAAGCAGATGCAGGCCATCGTGGGGATCTCGCTGCTGGAGATCCTGTCCAAG CACTCCTCCGACGAGGTGTACCTCGGACAGCGCGACACGCCGGAGTGGACGTCGGACGCC AAGGCGCTGGAGGCGTTCAAGCGGTTCGGCGCGCGGCTGACGGAGATCGAGAGCCGCGTC GTCGCCATGAACAAGGACCCCCACCGCAAGAACCGTGTCGGGCCGACCAATTTCCCCTAC ACGCTGCTCTACCCAAACACCTCCGACCTCAAGGGCGACGCTGCCGGCCTCTCCGCCAGG GGCATCCCCAACAGCATCTCCATCTGATCTCCATCTCATCAGATGAGGCTGCTCCACGGA GGCGCCAGCGTGGACAAGAGTAGTTTTACGGTGGTCTTTACCGGTAGTATTTTACTTTCA ATAATTGCCATGACACCTACACCCGGAGGTGTCATGGAGGATGAATTCGTTGTGTAATTT CCCTTTCAGTTCCTAATAAAGAATAAGGAAGCATATGGTTGTGTAGC