Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0738400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:30299613:30304241:1 gene:Os03g0738400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:serine hydroxymethyltransferase 1, chlorophyll-deficient mutant 1 description:Similar to Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT). (Os03t0738400-01);Similar to Serine hydroxymethyltransferase. (Os03t0738400-02);Similar to Serine hydroxymethyltransferase. (Os03t0738400-03)
Sequence	ATGGCCATGGCGACGGCGCTCCGCAAGCTCTCCTCCGACGCCCTCCGCCGCCAGCCGCTC TCCCGCATCACCCCGCTCTACTACATGGCGTCCCTGCCGGCGACGGAGGAGAGATCCGGA GTCACCTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCGAC ATCATCGAGCACGAGAAGGCCCGCCAATGGAAGGGTCTGGAGCTCATCCCGTCGGAGAAC TTCACCTCGGTGTCAGTGATGCAGGCGGTGGGATCCGTCATGACCAACAAGTACAGCGAG GGGTACCCCGGCGCGAGATACTACGGTGGAAACGAATACATTGATATGGCCGAGTCATTG TGCCAGAAACGTGCTTTGGAGGCCTTCCGCTTGGACCCAGCGAAATGGGGAGTGAATGTG CAACCTCTATCAGGGTCACCTGCCAACTTCCATGTTTACACTGCCCTATTGAAACCACAT GAGAGAATCATGGCTTTGGATCTTCCTCATGGTGGACATCTTTCTCACGGCTACCAGACT GATACTAAGAAGATTTCAGCAGTTTCGATATTCTTTGAGACAATGCCCTACAGATTGGAT GAAAGCACTGGCTTGATTGATTATGATCAGATGGAGAAAAGTGCCGTTCTTTTTAGGCCA AAGTTGATCGTTGCGGGTGCAAGTGCATATGCGCGTCTTTATGACTATGACCGCATGCGG AAGGTTTGTGACAAGCAGAAGGCAATACTTCTAGCAGATATGGCACATATCAGTGGGCTT GTCGCAGCTGGTGTTGTTCCATCTCCTTTTGATTATGCAGATGTAGTGACTACCACTACT CACAAGTCACTCCGTGGACCACGTGGAGCCATGATCTTTTACAGGAAGGGGGTGAAAGGA GTAAACAAGCAAGGCAAAGAGGTTATGTATGACTTTGAGGACAAGATCAATGCTGCTGTC TTCCCAGGTCTGCAAGGTGGACCACATAATCATACCATTACTGGCTTAGCTGTTGCGCTT AAGCAGGCAACTACTCCGGAGTACAGAGCTTATCAAGAGCAAGTTATGAGTAACTGTGCA AAATTTGCACAGAGCTTGACAGCAAAAGGCTACGAACTTGTCTCTGGTGGGACTGACAAC CATTTAGTGTTGGTAAATCTCAAGAGCAAGGGCATAGATGGTTCAAGAGTGGAGAAGGTT TTAGAAAACGTGCACATTGCAGCAAACAAGAACACAGTTCCTGGTGATGTTTCAGCTATG GTACCAGGAGGCATCAGGATGGGAACCCCAGCACTGACCTCAAGAGGATTTGTTGAGGAG GACTTTGCTAAGGTTGCTGATTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAG GCTGCAGCAGGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAAC ATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAAACAGTTCCCC ACAATTGGGTTTGAGAAAGAAACCATGAAGTACAAGAACTAA

Peptide Sequence

PEP ID	Os03t0738400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:30299613:30304241:1 gene:Os03g0738400 transcript:Os03t0738400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:serine hydroxymethyltransferase 1, chlorophyll-deficient mutant 1 description:Similar to Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT). (Os03t0738400-01);Similar to Serine hydroxymethyltransferase. (Os03t0738400-02);Similar to Serine hydroxymethyltransferase. (Os03t0738400-03)
Sequence	MAMATALRKLSSDALRRQPLSRITPLYYMASLPATEERSGVTWPKQLNAPLEEVDPEIAD IIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL CQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQT DTKKISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPKLIVAGASAYARLYDYDRMR KVCDKQKAILLADMAHISGLVAAGVVPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKG VNKQGKEVMYDFEDKINAAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVMSNCA KFAQSLTAKGYELVSGGTDNHLVLVNLKSKGIDGSRVEKVLENVHIAANKNTVPGDVSAM VPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKDFVATLQSDSN IQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN

Transcript Sequence

Transcript ID	Os03t0738400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:30299613:30304241:1 gene:Os03g0738400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:serine hydroxymethyltransferase 1, chlorophyll-deficient mutant 1 description:Similar to Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT). (Os03t0738400-01);Similar to Serine hydroxymethyltransferase. (Os03t0738400-02);Similar to Serine hydroxymethyltransferase. (Os03t0738400-03)
Sequence	AAACCCCGAGACCCCCCCGCCTCCACCACCACCCGCCGCTCGCCGCTCGCCCACCATGGC CATGGCGACGGCGCTCCGCAAGCTCTCCTCCGACGCCCTCCGCCGCCAGCCGCTCTCCCG CATCACCCCGCTCTACTACATGGCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCAC CTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCGACATCAT CGAGCACGAGAAGGCCCGCCAATGGAAGGGTCTGGAGCTCATCCCGTCGGAGAACTTCAC CTCGGTGTCAGTGATGCAGGCGGTGGGATCCGTCATGACCAACAAGTACAGCGAGGGGTA CCCCGGCGCGAGATACTACGGTGGAAACGAATACATTGATATGGCCGAGTCATTGTGCCA GAAACGTGCTTTGGAGGCCTTCCGCTTGGACCCAGCGAAATGGGGAGTGAATGTGCAACC TCTATCAGGGTCACCTGCCAACTTCCATGTTTACACTGCCCTATTGAAACCACATGAGAG AATCATGGCTTTGGATCTTCCTCATGGTGGACATCTTTCTCACGGCTACCAGACTGATAC TAAGAAGATTTCAGCAGTTTCGATATTCTTTGAGACAATGCCCTACAGATTGGATGAAAG CACTGGCTTGATTGATTATGATCAGATGGAGAAAAGTGCCGTTCTTTTTAGGCCAAAGTT GATCGTTGCGGGTGCAAGTGCATATGCGCGTCTTTATGACTATGACCGCATGCGGAAGGT TTGTGACAAGCAGAAGGCAATACTTCTAGCAGATATGGCACATATCAGTGGGCTTGTCGC AGCTGGTGTTGTTCCATCTCCTTTTGATTATGCAGATGTAGTGACTACCACTACTCACAA GTCACTCCGTGGACCACGTGGAGCCATGATCTTTTACAGGAAGGGGGTGAAAGGAGTAAA CAAGCAAGGCAAAGAGGTTATGTATGACTTTGAGGACAAGATCAATGCTGCTGTCTTCCC AGGTCTGCAAGGTGGACCACATAATCATACCATTACTGGCTTAGCTGTTGCGCTTAAGCA GGCAACTACTCCGGAGTACAGAGCTTATCAAGAGCAAGTTATGAGTAACTGTGCAAAATT TGCACAGAGCTTGACAGCAAAAGGCTACGAACTTGTCTCTGGTGGGACTGACAACCATTT AGTGTTGGTAAATCTCAAGAGCAAGGGCATAGATGGTTCAAGAGTGGAGAAGGTTTTAGA AAACGTGCACATTGCAGCAAACAAGAACACAGTTCCTGGTGATGTTTCAGCTATGGTACC AGGAGGCATCAGGATGGGAACCCCAGCACTGACCTCAAGAGGATTTGTTGAGGAGGACTT TGCTAAGGTTGCTGATTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGC AGCAGGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCA ATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAAACAGTTCCCCACAAT TGGGTTTGAGAAAGAAACCATGAAGTACAAGAACTAAGAAACTTTGAATGGAACAGCAAG GGTAAAAGAAAAGGCATCAAGCTGAATTCCTGAGGTGACTGTTGGAATTCTTGCAAGAAC AAGTCGGTGTAAACATATATCCATGGAGTGCCATCTTATGTAAAAGGGACCCCTGGCATT TTACAGCGTGTGGAAACTTTGTCAATAGTTCTTATCGTAGACACCTACTGTAAGATGTTA TGCTAATGCTATATTAACCTTCACTATCTTCTTGGACAAGCAGTTACACATACTTTGGTG TATTCTGTGAATAATTCGCATGATTGCGGAATTTTTCGTGTTTATAAATCGTAACTTGTA ATCTTTTGGCCCTGCACGCAATTTGAAAGCCCTCGATCGGATTGTCGTTTACT