Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0736500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:30192888:30194132:1 gene:Os03g0736500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Syntaxin-related protein KNOLLE, OsKNOLLE description:Syntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111). (Os03t0736500-01)
Sequence	ATGAACGACCTCATGACCAAGTCGTTCATGAGCTACGTCGACCTGAAGAAGGCGGCGATG AAGGACCTGGAGGCGGGCGGGGATGGCGTGGAGCTCCCCGAGGTGGGCGTCACCGACGAG CGCCTCAAGGGGTTCTTCCAGGAGACGGAGGCGGTGGAGGAGGAGATGGCCGCCATCCGC GACGCGCTGGCGAGGCTCAACGCCGCCAACGAGGAGGGCAAGTCGCTGCACCAGCCCGAC GCCCTCCGCGCGCTCCGCGGCCGCGTCAACGCCGACATCATCGCCGTGCTCCGCCGCGCG CGCGACATCCGCGCCAGGCTCGAGGCCATGGACCGCGCCAACGCGGCGCAGCGCAGGCTC TCCGCGGGCTGCCGCGAGGGCACCCCGCTCGACCGCACCCGCACCGCGCTCACCGCCGCG CTCCGGAAGAAGCTCAAGGACCTCATGCTCGACTTCCAGGCCCTGCGGCAGCGGATCATG TCCGAGTACAAGGACACCGTCGAGCGCCGCTACTACACCCTCACCGGCGAGGTCCCCGAG GAGGAGGTGATCGAGCGCATCATCTCCGAGGGACGCAGCGAGGAGCTCCTGTGCGCCGCC GTGGCGGAGCACGGCAAGGGCGCGGTGCTGGCCACGGTGCACGAGATCCAGGACCGCCAC GACGCCGCCCGCGAGGTGGAGCGCAGCCTCCTGGAGCTCCACCAGGTGTTCCTCGACATG GCCGTGGTGGTGGAGTCCCAGGGGGAGCAGCTCGACGACATCGAGCGCCACGTCAACAGC GCCACCACCTACGTCCAGGGCGGCAACAAGGAGCTACGCAAGGCCCGCGAGCACCAGCGC AGCAGCCGCAAGTGGCTCTGCATCGGCATCATCATCCTGCTGCTCCTCGTCCTCCTCGTC ATCGTGCCCATCGCCACCAGCTTCAAGAGATCGTGA

Peptide Sequence

PEP ID	Os03t0736500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:30192888:30194132:1 gene:Os03g0736500 transcript:Os03t0736500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Syntaxin-related protein KNOLLE, OsKNOLLE description:Syntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111). (Os03t0736500-01)
Sequence	MNDLMTKSFMSYVDLKKAAMKDLEAGGDGVELPEVGVTDERLKGFFQETEAVEEEMAAIR DALARLNAANEEGKSLHQPDALRALRGRVNADIIAVLRRARDIRARLEAMDRANAAQRRL SAGCREGTPLDRTRTALTAALRKKLKDLMLDFQALRQRIMSEYKDTVERRYYTLTGEVPE EEVIERIISEGRSEELLCAAVAEHGKGAVLATVHEIQDRHDAAREVERSLLELHQVFLDM AVVVESQGEQLDDIERHVNSATTYVQGGNKELRKAREHQRSSRKWLCIGIIILLLLVLLV IVPIATSFKRS

Transcript Sequence

Transcript ID	Os03t0736500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:30192888:30194132:1 gene:Os03g0736500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Syntaxin-related protein KNOLLE, OsKNOLLE description:Syntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111). (Os03t0736500-01)
Sequence	CTCCTCACAGATCACCAGATCCCCTTCGCCTTCGCCTTCGCCTCACCACCAAACCCTAGA GAAGCGAGAGAGAGGGAGAGATCTCCACGAGATTCGCCGCCATGAACGACCTCATGACCA AGTCGTTCATGAGCTACGTCGACCTGAAGAAGGCGGCGATGAAGGACCTGGAGGCGGGCG GGGATGGCGTGGAGCTCCCCGAGGTGGGCGTCACCGACGAGCGCCTCAAGGGGTTCTTCC AGGAGACGGAGGCGGTGGAGGAGGAGATGGCCGCCATCCGCGACGCGCTGGCGAGGCTCA ACGCCGCCAACGAGGAGGGCAAGTCGCTGCACCAGCCCGACGCCCTCCGCGCGCTCCGCG GCCGCGTCAACGCCGACATCATCGCCGTGCTCCGCCGCGCGCGCGACATCCGCGCCAGGC TCGAGGCCATGGACCGCGCCAACGCGGCGCAGCGCAGGCTCTCCGCGGGCTGCCGCGAGG GCACCCCGCTCGACCGCACCCGCACCGCGCTCACCGCCGCGCTCCGGAAGAAGCTCAAGG ACCTCATGCTCGACTTCCAGGCCCTGCGGCAGCGGATCATGTCCGAGTACAAGGACACCG TCGAGCGCCGCTACTACACCCTCACCGGCGAGGTCCCCGAGGAGGAGGTGATCGAGCGCA TCATCTCCGAGGGACGCAGCGAGGAGCTCCTGTGCGCCGCCGTGGCGGAGCACGGCAAGG GCGCGGTGCTGGCCACGGTGCACGAGATCCAGGACCGCCACGACGCCGCCCGCGAGGTGG AGCGCAGCCTCCTGGAGCTCCACCAGGTGTTCCTCGACATGGCCGTGGTGGTGGAGTCCC AGGGGGAGCAGCTCGACGACATCGAGCGCCACGTCAACAGCGCCACCACCTACGTCCAGG GCGGCAACAAGGAGCTACGCAAGGCCCGCGAGCACCAGCGCAGCAGCCGCAAGTGGCTCT GCATCGGCATCATCATCCTGCTGCTCCTCGTCCTCCTCGTCATCGTGCCCATCGCCACCA GCTTCAAGAGATCGTGAGCGCGCGGCCGAGGAGAAGCAGCTCATGTTGTTCAGAAAGGGT TCGATCAATTGATCCAGACACTATGCAGTTGTGTCTCAATTCCGGTTTTTTTTTCGCTTT CGTGTTCTCGATTCGTTCGTTAATTTCTGGCCGAATGTTTCTGTATCAATCAGGATTTAG CTGATGATCATATAAAATACTCTACACCCGTATATTTGTTCCGTC