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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0734000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:30071523:30072291:1 gene:Os03g0734000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat containing protein. (Os03t0734000-01)
Sequence

ATGGCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTG
GAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATC
ACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCG
GATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGA

Peptide Sequence

PEP ID

Os03t0734000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:30071523:30072291:1 gene:Os03g0734000 transcript:Os03t0734000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat containing protein. (Os03t0734000-01)
Sequence

MASIKLSLACVLLISGLVMLERIEHTEAVCTLFCAKGTYITCSNHPYEQLYGCACRCAPP
DGVDCVVHLADGSTQQC

Transcript Sequence

Transcript ID

Os03t0734000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:30071523:30072291:1 gene:Os03g0734000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat containing protein. (Os03t0734000-01)
Sequence

AAACATAGAGCCATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACAT
GGCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGA
GAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCAC
CTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGA
TGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAA
CGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACT
GTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATT
TCAGTACTACGAATCTGAATATACTCGTAGTATTAGGACGTGTTCCATCTAGCTAAAAAC
TCTTATATTCTAGGACGGGGGGAGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGC
CATACGTGTGCCTCCTTTGTGTCACTCCTTAAGGTGTGTTCGGAACTCCAAATTCCCAAA
TGCTGTAATAAAACGATCAAGAGGAATCCTGCATGGCTGCCTCTTGCTTCCTTTGTGTC