Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0733400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:30039117:30042858:-1 gene:Os03g0733400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os03t0733400-01)
Sequence	ATGACTGAGGAAACTGGCAACGACTTCCAGATGGTTCAAGGTTATGAGATTGTCCCAAGC AATGAGGAAGCTCATGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTGCGGAGGACTTA GCTCAAGGTGACGAGGTCCAAGTAAATGGATTGGTCAGTGCTGAGATGAGTACCCCTCCA ACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTATTGAAGCTGTC TCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGTAAGCAAACTTTTGCTTACAGCTCT GGTTCAAAAATTGCGGGTACTAGCCATCTCAAGAGGCACATTACCTTGGGTTCATGTCCT ATAATTAAGAACCAAGAGCACAAGCTAGCACTGACTCCAGCTGTAGGGACTGACAATGAT GGCGAGGGCACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTGGTTATGCAAAT GCTGCTTTTGATCAAGACCGCAGTTGTTCATATCTGGCGAAGATGATCATTTTGCATGAC TATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACAGTCTGCAGCCA CGTTTCAGGGTTGTAGATGTTGAGACAATGGAGGGGGAGGTGTATGCTGTTTACCAGAAA GAAAAGGAAAACCTCATGCAAGCATTCAGCACTATGCCTGGAAGGATTAGCCTCACTATT GGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGCAGTTTATTGAC TCTGAGTGGAAGATACATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCA GAGAATGCACTTAGTGAAGCTATTAGTACAAGCCTTTCAGACTGGAATATGAAGGACAAA CTATTCACCATCACATTGGACAATGATTGCTCATCACATGATATATATAGTGCGAATCTG AGGGATTATCTCTCCAACAAGAACAACCTCATGCTCAAGGGCCAACTGTTTGTTGTAAGG TGTTATGCCCATATCCTGAATGCAGTTGCTCAGGATGTTATTGCTTCAATTCATGGTGTC ATCTATAATATCCGTGAAAGCATTAAGTTCATAAAAGCTTCTCCTAGCCGTGAGGAGAAG TTTGCAGAGATTGCTCTGCAGCTAGAGATCCCAAGTACCAAGACCCTTTGTCTGGATGTT ACGACACAGTGGAACACTACCTATCTCATGCTGCTGGCTGCCTTGGATTATAAGCAGGCC TTTTCTACTCTTGAGACAAGTGATGATAACTACAATGAGGCACCGTCCGCTGAGGACTGG AAAAAAGTTGAGGCTGCCTGCAATTACTTGAAGCTATTGTATGACTCAGCACATAGCATC ATGGCTGCAGCAAATCCAACTTCAAATCTCTTTTTCCATGAGGCATGGAAACTTCAGCTC GAGCTGTCAAATGCCACAGGGCATGAAGACCCTGTTTTCAGCAGCATTGCCAAGGATATG CACGAGAGGTTTGACAAGTACTGGAAAGATTGCAACCTTGTGTTAGCTATTGCTGTTGTG ATGGATCCGCGCTTCAAGATGAAGCTTGTTGAGTTCAGCTACTCGAAAATTTATGGTGTT GAAGCTGCAAAGTATGTTAAGGTGGTGGATGATGCTGTTCATGAGCTTTACAAGGAGTAT GTTGCACAACCCCTCCCCTTGACGCCGGCTTATGTTGAGCAAGGGGACGGTAATAATGCA CCTGCTAGCGAGAATGGTACTCAAGCAACTGCTCCTTCGACCGGCGATGGACTTGTGGAC TTTGATATGTACCTTTCTGAGATAGCTACAAGCCAGCCAACAAAATCTGAACTGGAACAG TACCTGGATGAGTCCCTCACTCCGCGCATCCAGGAATTTGACATTCTGAACTGGTGGAAG CTCAACACTCTCAAGTTCCCTACTCTCTCAAGGATGGCCCGGGATATCTTGGCCATTCCG ATGTCGATGGTGAGCAGCGGCAACTCTATTTTCTCTGCTGGAACAGGAACTCGCATGCTT GATGACTACAGAAGCTCATTGCGTCCAGAAATTGTGGAGGCGCTCGTCTGCGCCAAAGAC TGGCTTCAGTATTTACCAGCTACCCCGGAGGCGCCGAGTACCACGCTTGTCAAGGTGGAT GCACCATAG

Peptide Sequence

PEP ID	Os03t0733400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:30039117:30042858:-1 gene:Os03g0733400 transcript:Os03t0733400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os03t0733400-01)
Sequence	MTEETGNDFQMVQGYEIVPSNEEAHAEEVQGDELVLAEDLAQGDEVQVNGLVSAEMSTPP TSRRRRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCP IIKNQEHKLALTPAVGTDNDGEGTVERPSKRRYRYTGYANAAFDQDRSCSYLAKMIILHD YPLHIVQQPAFTTFIDSLQPRFRVVDVETMEGEVYAVYQKEKENLMQAFSTMPGRISLTI GLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDK LFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGV IYNIRESIKFIKASPSREEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQA FSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQL ELSNATGHEDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGV EAAKYVKVVDDAVHELYKEYVAQPLPLTPAYVEQGDGNNAPASENGTQATAPSTGDGLVD FDMYLSEIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKFPTLSRMARDILAIP MSMVSSGNSIFSAGTGTRMLDDYRSSLRPEIVEALVCAKDWLQYLPATPEAPSTTLVKVD AP

Transcript Sequence

Transcript ID	Os03t0733400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:30039117:30042858:-1 gene:Os03g0733400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os03t0733400-01)
Sequence	TCTTCTCTTCTTCCTGCCTCGCGAGGTCTCGTGGTCGGGGGGTGGGGGGTTTGAATTCCG TTTCCAGATCTGCGCGTGCTTGGAGCTTTTCGTGCGGTTCTTCTTCTTTTTTTTGATCGG GATTTGGGAGGGAGGCCCGTTATCCAGGCCCAATTTGTCACCGATTTCTCCTCGCGAATC CACTGCTGCTTGCTGCTGTGCTGGCTACATTGTTGTTGTTGTTGGGTTAGGGATTCTTTG TCGGGGGGAAGCGCGGCCTGCCTGGAAATCGTCGGAGCTCGCTGAGATGTCGAGTTTTTG CGCATGAATTTCACCGTAGGGGGGGGGGGGGGATGGGAGATCCGGAGAGAGGGCAACTTT TGATTCGTTCGTTTTGGGGGAGATATGTGATGTTGGACTTGGTGCGCTTAGATAATTGAA TCTGAATATGTGCTTTGTGTAGTCGTGCGGAGAAATTTATCTTTCTTTGTCCAAAGAAAG CTCTACCACTAGCTACCTCTTCAGATAGGTTCTTGCAACTTTATAGTACTAGCTTAGCAT CTTAAACTAGCCTCTTGCCGCTGTTTAGCTAACTAGGTGAGCTTGATTTTCAAGTCCTGT GTAACTGTGTCCCGCCAACTCAAGCAATACATAGGTTGTTAATTACTTCCTTCTCACCGA TTATTTTGAGTTCGTGCCTACGAAGAACAAGAATGGGTTGGCTTGCATTGCATGAGGATA ATAAGGAAGATATGACTCTTAAACTTATCTGGAGTTGCTGAAATCACTCCTAGTAGGGAG TAAAGTTACCAACTAAGTTTGCACGAGTCATTCTGGTCCAATTAAATTTGCATGTGATAC CCCTTCTTTTCTTGAAATTTGTCGGGAAAACAACGTAGCACATGGTTCTGCTCATGAAGT TTGCACTTTCGGTGGCAAATAAAATTTAATTTAAATTGTGTACTTTAAGCATTTTTACTG AGGAGTGAGAAGATATGTTCCCCATTCTAAGTTTCCATAATATTCCTGGATGACATTTAT AGTTTTGTTATTTCATCTGTGCCCCAGTTACTATAACCTGGTTTGCTAATTTGTTATCAA GAAATCATGTTGTCTTTCTTTTATCTTCCTGTTTTGTTAAATAGGCCACTGTAGTGATAC TGGTTTGTTATTGTCCGTGTATAAGTCACTTTCGAGTTTTTTTTTTGGCCAAATGATTGT TATACTGACTTCTGCTGTTACCATGTTACTATTTGACAGATTTTGTGAGTTCTAGCTACT AGCCAAGAAGCATGACTGAGGAAACTGGCAACGACTTCCAGATGGTTCAAGGTTATGAGA TTGTCCCAAGCAATGAGGAAGCTCATGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTG CGGAGGACTTAGCTCAAGGTGACGAGGTCCAAGTAAATGGATTGGTCAGTGCTGAGATGA GTACCCCTCCAACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTA TTGAAGCTGTCTCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGTAAGCAAACTTTTG CTTACAGCTCTGGTTCAAAAATTGCGGGTACTAGCCATCTCAAGAGGCACATTACCTTGG GTTCATGTCCTATAATTAAGAACCAAGAGCACAAGCTAGCACTGACTCCAGCTGTAGGGA CTGACAATGATGGCGAGGGCACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTG GTTATGCAAATGCTGCTTTTGATCAAGACCGCAGTTGTTCATATCTGGCGAAGATGATCA TTTTGCATGACTATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACA GTCTGCAGCCACGTTTCAGGGTTGTAGATGTTGAGACAATGGAGGGGGAGGTGTATGCTG TTTACCAGAAAGAAAAGGAAAACCTCATGCAAGCATTCAGCACTATGCCTGGAAGGATTA GCCTCACTATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGC AGTTTATTGACTCTGAGTGGAAGATACATCGAAGAATGCTAAACTTCATGATGGTGTCTT CTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTACAAGCCTTTCAGACTGGAATA TGAAGGACAAACTATTCACCATCACATTGGACAATGATTGCTCATCACATGATATATATA GTGCGAATCTGAGGGATTATCTCTCCAACAAGAACAACCTCATGCTCAAGGGCCAACTGT TTGTTGTAAGGTGTTATGCCCATATCCTGAATGCAGTTGCTCAGGATGTTATTGCTTCAA TTCATGGTGTCATCTATAATATCCGTGAAAGCATTAAGTTCATAAAAGCTTCTCCTAGCC GTGAGGAGAAGTTTGCAGAGATTGCTCTGCAGCTAGAGATCCCAAGTACCAAGACCCTTT GTCTGGATGTTACGACACAGTGGAACACTACCTATCTCATGCTGCTGGCTGCCTTGGATT ATAAGCAGGCCTTTTCTACTCTTGAGACAAGTGATGATAACTACAATGAGGCACCGTCCG CTGAGGACTGGAAAAAAGTTGAGGCTGCCTGCAATTACTTGAAGCTATTGTATGACTCAG CACATAGCATCATGGCTGCAGCAAATCCAACTTCAAATCTCTTTTTCCATGAGGCATGGA AACTTCAGCTCGAGCTGTCAAATGCCACAGGGCATGAAGACCCTGTTTTCAGCAGCATTG CCAAGGATATGCACGAGAGGTTTGACAAGTACTGGAAAGATTGCAACCTTGTGTTAGCTA TTGCTGTTGTGATGGATCCGCGCTTCAAGATGAAGCTTGTTGAGTTCAGCTACTCGAAAA TTTATGGTGTTGAAGCTGCAAAGTATGTTAAGGTGGTGGATGATGCTGTTCATGAGCTTT ACAAGGAGTATGTTGCACAACCCCTCCCCTTGACGCCGGCTTATGTTGAGCAAGGGGACG GTAATAATGCACCTGCTAGCGAGAATGGTACTCAAGCAACTGCTCCTTCGACCGGCGATG GACTTGTGGACTTTGATATGTACCTTTCTGAGATAGCTACAAGCCAGCCAACAAAATCTG AACTGGAACAGTACCTGGATGAGTCCCTCACTCCGCGCATCCAGGAATTTGACATTCTGA ACTGGTGGAAGCTCAACACTCTCAAGTTCCCTACTCTCTCAAGGATGGCCCGGGATATCT TGGCCATTCCGATGTCGATGGTGAGCAGCGGCAACTCTATTTTCTCTGCTGGAACAGGAA CTCGCATGCTTGATGACTACAGAAGCTCATTGCGTCCAGAAATTGTGGAGGCGCTCGTCT GCGCCAAAGACTGGCTTCAGTATTTACCAGCTACCCCGGAGGCGCCGAGTACCACGCTTG TCAAGGTGGATGCACCATAGGCTCGCCGTGATCCCCCCCCCTCCCCCCCTTCCTCTTGTG AAGCAACAGCATCCTATCCGTATTTTAGGCAGGGACTATGAACTGATTGAGATCCGAGCT TATCTTCCTAGGGTGTAATGTGCTGTATCGTACTCTGTTAACTCCTTCATGTTATTATGT ACGCTTTGTCTTGTAGTATGCCATCGGAGTTACCTGACATTACGTGTAGTGTGTGCGCTG GCTGCATAATGTGTATCAGTTGATGCCTTATGTCTGGACTTCCCTTCATTATCATCCATT GTAGCATGTGATTGTTCTGTGC